| 7411571 | Bw138 | Body weight QTL 138 | 14.3 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 9 | 32535505 | 77535505 | Rat |
| 1300180 | Bw14 | Body weight QTL 14 | 3.776 | | body mass (VT:0001259) | body weight (CMO:0000012) | 9 | 23754024 | 61381613 | Rat |
| 631680 | Cm11 | Cardiac mass QTL 11 | 3.1 | 0.00089 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 9 | 20430519 | 65430519 | Rat |
| 70218 | Cm28 | Cardiac mass QTL 28 | 8.3 | 0.0001 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 9 | 25268044 | 79271759 | Rat |
| 724544 | Uae9 | Urinary albumin excretion QTL 9 | 4.5 | | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 9 | 25268044 | 114175309 | Rat |
| 1354650 | Despr5 | Despair related QTL 5 | 4.01 | 0.0017 | locomotor behavior trait (VT:0001392) | amount of time spent in voluntary immobility (CMO:0001043) | 9 | 1254084 | 46254084 | Rat |
| 1300124 | Cm4 | Cardiac mass QTL 4 | 3.55 | | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 9 | 1 | 40594091 | Rat |
| 7207805 | Bmd88 | Bone mineral density QTL 88 | 4 | | femur mineral mass (VT:0010011) | total volumetric bone mineral density (CMO:0001728) | 9 | 23754024 | 58157242 | Rat |
| 631643 | Bp120 | Blood pressure QTL 120 | 3 | 0.004 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 22071200 | 67071200 | Rat |
| 731164 | Uae25 | Urinary albumin excretion QTL 25 | 3.5 | 0.0001 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 9 | 25661188 | 100929786 | Rat |
| 9589133 | Insul26 | Insulin level QTL 26 | 17.96 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 9 | 8952560 | 53952560 | Rat |
| 631211 | Bw4 | Body weight QTL4 | 5.31 | | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 9 | 5109826 | 50109826 | Rat |
| 2303559 | Gluco54 | Glucose level QTL 54 | 2 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 9 | 1254084 | 46254084 | Rat |
| 7411609 | Foco16 | Food consumption QTL 16 | 25.6 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 9 | 8952560 | 53952560 | Rat |
| 8662828 | Vetf6 | Vascular elastic tissue fragility QTL 6 | 3.9 | | artery integrity trait (VT:0010639) | patent ductus arteriosus score (CMO:0002566) | 9 | 36962359 | 92058970 | Rat |
| 1598834 | Memor11 | Memory QTL 11 | 2.5 | | exploratory behavior trait (VT:0010471) | average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674) | 9 | 36962359 | 77814038 | Rat |
| 70186 | Niddm26 | Non-insulin dependent diabetes mellitus QTL 26 | 3.87 | | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 9 | 22071169 | 86369743 | Rat |
| 7207814 | Bmd91 | Bone mineral density QTL 91 | 3.5 | | femur size trait (VT:1000369) | femoral neck cross-sectional area (CMO:0001697) | 9 | 23754144 | 83851531 | Rat |
| 1641911 | Alcrsp13 | Alcohol response QTL 13 | | | response to alcohol trait (VT:0010489) | brain neurotensin receptor 1 density (CMO:0002068) | 9 | 1 | 43718459 | Rat |
| 2290450 | Scl57 | Serum cholesterol level QTL 57 | 4.15 | | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 9 | 36962359 | 95410867 | Rat |
| 61425 | Cia15 | Collagen induced arthritis QTL 15 | 4.6 | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 9 | 5109826 | 42921101 | Rat |
| 10054125 | Srcrt7 | Stress Responsive Cort QTL 7 | 3.33 | 0.0011 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 9 | 1 | 87073594 | Rat |
| 724543 | Cm20 | Cardiac mass QTL 20 | 3.9 | | heart mass (VT:0007028) | calculated heart weight (CMO:0000073) | 9 | 16961398 | 40594091 | Rat |
| 1600365 | Mcs20 | Mammary carcinoma susceptibility QTL 20 | 3 | | mammary gland integrity trait (VT:0010552) | mammary tumor growth rate (CMO:0000344) | 9 | 13533770 | 42791750 | Rat |
| 11353947 | Bp392 | Blood pressure QTL 392 | | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 7283252 | 52283252 | Rat |
| 1331757 | Cdexp1 | CD45RC expression in CD8 T cells QTL 1 | 4.3 | | CD8-positive T cell quantity (VT:0008077) | blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990) | 9 | 1024537 | 67509080 | Rat |
| 7411656 | Foco26 | Food consumption QTL 26 | 9.8 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 9 | 32535505 | 77535505 | Rat |
| 1298088 | Edpm11 | Estrogen-dependent pituitary mass QTL 11 | 2.5 | | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | 9 | 1 | 43718459 | Rat |
| 1598823 | Memor16 | Memory QTL 16 | 1.9 | | exploratory behavior trait (VT:0010471) | difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678) | 9 | 22133322 | 49968732 | Rat |
| 1641894 | Alcrsp12 | Alcohol response QTL 12 | | | response to alcohol trait (VT:0010489) | brain neurotensin receptor 1 density (CMO:0002068) | 9 | 27468639 | 72468639 | Rat |
