D4Got35 Marker Search Result - Rat Genome Database

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Marker: D4Got35

Symbol: D4Got35
Previously known as: oxsts2053; OT31.43; 
RGD ID: 43797
Expected Size: 198 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2458,489,833 - 58,490,031 (+)MAPPERmRatBN7.2
Rnor_6.0457,158,648 - 57,158,845NCBIRnor6.0
Rnor_5.0456,925,809 - 56,926,006UniSTSRnor5.0
RGSC_v3.4456,762,563 - 56,762,761RGDRGSC3.4
RGSC_v3.4456,762,564 - 56,762,761UniSTSRGSC3.4
RGSC_v3.1457,038,694 - 57,038,891RGD
Celera453,591,161 - 53,591,358UniSTS
RH 3.4 Map4334.4UniSTS
RH 3.4 Map4334.4RGD
RH 2.0 Map4409.8RGD
Cytogenetic Map4q22UniSTS
Is Marker For: Genes:   Ahcyl2  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. UniSTS Pipeline RGD automated pipelines
4. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
5. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer CACTGCTGGCCTCTACAAAC
Reverse Primer TGCTAGAATTGTGGGTGGTG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1564895Ahcyl2adenosylhomocysteinase-like 245838129058531061Rat
GenBank Nucleotide AC107356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU027296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 41 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41467806559678065Rat
5685012Bmd87Bone mineral density QTL 875.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)45664777678882945Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
5685009Bmd86Bone mineral density QTL 863.7tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)45664777678882945Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)43952426474726312Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
634311Sach7Saccharin preference QTL 7taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)45711443281266970Rat

1 to 10 of 41 rows


Database
Acc Id
Source(s)
NCBI Gene 312192 UniSTS