D4Rhw16 Marker Search Result - Rat Genome Database

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Marker: D4Rhw16

Symbol: D4Rhw16
Previously known as: ssr68; 
RGD ID: 1576376
Expected Size: 248 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2478,029,319 - 78,029,567 (+)MAPPERmRatBN7.2
Rnor_6.0478,713,514 - 78,713,761NCBIRnor6.0
Rnor_5.04143,401,933 - 143,402,180UniSTSRnor5.0
RGSC_v3.4477,180,453 - 77,180,700UniSTSRGSC3.4
Celera472,965,183 - 72,965,430UniSTS
Cytogenetic Map4q24RGD
Is Marker For: Genes:   Gpnmb  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer AGCCAAGCTGCTTAGGATTG
Reverse Primer TCATTTGTTTATTGCCCGTGT
 
Template 
AGCCAAGCTGCTTAGGATTGACTGGAACTTAGTTGTTTCTGTTTTTAAGGATTTGGGGCGCGCG
CGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTGGTGTT
TTTGTTGTTACAAAATGTTATCATAAGAGGTTGTCATTTGCTTACCTGTGAATTTGTCAGTTAG
ATCACAACTTGGAACATCTACTCAGACTTATTTTAACACGGGCAATAAACAAATGA


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
71008Gpnmbglycoprotein nmb47801024778031491Rat
GenBank Nucleotide AC098114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC120721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH614604.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 58 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
61336Bp21Blood pressure QTL 214.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711470578881294Rat

1 to 10 of 58 rows


Database
Acc Id
Source(s)
NCBI Gene 113955 UniSTS