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Gene: Sult1c2 (sulfotransferase family 1C member 2) Rattus norvegicus

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No known orthologs.

Symbol:

Sult1c2

Name:

sulfotransferase family 1C member 2

RGD ID:

621064

Description:

Enables aryl sulfotransferase activity. Involved in sulfation. Located in lysosome. Orthologous to human SULT1C2 (sulfotransferase family 1C member 2).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC100910526; MGC112625; MGC124969; rSULT1C2; ST1C2; sulfotransferase 1C2; sulfotransferase 1C2-like; sulfotransferase family, cytosolic, 1C, member 2; sulfotransferase K1; sultK1

RGD Orthologs

Alliance Orthologs

More Info

homologs ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Other homologs ²				less info ...
Homo sapiens (human):	SULT1C2 (sulfotransferase family 1C member 2)	HGNC	Panther, Treefam
Alliance orthologs ³
Homo sapiens (human):	SULT1C2 (sulfotransferase family 1C member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Sult1c2 (sulfotransferase family, cytosolic, 1C, member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	sult1st6 (sulfotransferase family 1, cytosolic sulfotransferase 6)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	sult1st5 (sulfotransferase family 1, cytosolic sulfotransferase 5)	Alliance	DIOPT (InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	St1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ssu-1	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	St2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	St4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA)
Xenopus tropicalis (tropical clawed frog):	sult1c2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	7,436,981 - 7,486,894 (+)	NCBI		GRCr8
mRatBN7.2	9	6,824,840 - 6,848,830 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	6,745,700 - 7,131,245 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	8,810,620 - 8,834,585 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	13,909,201 - 13,933,166 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	19,619,451 - 19,643,408 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	4,654,278 - 4,685,418 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	4,654,294 - 4,685,383 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	9	4,807,717 - 4,834,335 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	3,693,343 - 3,725,594 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	972,522 - 998,125 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	1,030,810 - 1,160,809 (-)	NCBI
Cytogenetic Map	9	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Sult1c2	Rat	sulfation	involved_in	IDA		634073	PMID:10872834	UniProt
Sult1c2	Rat	sulfation	involved_in	IBA	FB:FBgn0033887 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Sult1c2	Rat	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Sult1c2	Rat	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Sult1c2	Rat	cytoplasm	is_active_in	IBA	MGI:102928 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Sult1c2	Rat	lysosome	located_in	IEA	UniProtKB-KW:KW-0458	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Sult1c2	Rat	lysosome	located_in	IEA	UniProtKB-SubCell:SL-0158	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Sult1c2	Rat	lysosome	located_in	IDA		634073	PMID:10872834	UniProt
Sult1c2	Rat	mitochondrion	located_in	IEA	UniProtKB-SubCell:SL-0173	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Sult1c2	Rat	mitochondrion	located_in	IEA	UniProtKB-KW:KW-0496	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Sult1c2	Rat	aryl sulfotransferase activity	enables	IDA		634073	PMID:10872834	UniProt
Sult1c2	Rat	aryl sulfotransferase activity	enables	IBA	MGI:102928 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Sult1c2	Rat	aryl sulfotransferase activity	enables	IEA	RHEA:12164	1600115	GO_REF:0000116	RHEA	GO_REF:0000116
Sult1c2	Rat	cholesterol sulfotransferase activity	enables	IEA	RHEA:52368	1600115	GO_REF:0000116	RHEA	GO_REF:0000116
Sult1c2	Rat	sulfotransferase activity	enables	IEA	InterPro:IPR000863	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Sult1c2	Rat	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Enzymatic properties, tissue-specific expression, and lysosomal location of two highly homologous rat SULT1C2 sulfotransferases.	Xiangrong L, etal., Biochem Biophys Res Commun 2000 May 27;272(1):242-50.

PMID:12164856	PMID:12477932	PMID:15489334	PMID:24028175	PMID:26427720

Variants in Sult1c2
175 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	394
Count of miRNA genes:	209
Interacting mature miRNAs:	243
Transcripts:	ENSRNOT00000040879, ENSRNOT00000050420, ENSRNOT00000061896
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5109826	50109826	Rat
10054141	Gmadr4	Adrenal mass QTL 4	2.45	0.0074	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	9	1	14209783	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	1254084	46254084	Rat
1578675	Bss17	Bone structure and strength QTL 17	3.8		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	9	3368652	13533896	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	1	37999212	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	1	43718459	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	1254084	46254084	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	40594091	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5109826	42921101	Rat
70226	Eae4	Experimental allergic encephalomyelitis QTL 4			nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	9	1	25661317	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	1	37999212	Rat
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	1	37999212	Rat
1331757	Cdexp1	CD45RC expression in CD8 T cells QTL 1	4.3		CD8-positive T cell quantity (VT:0008077)	blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)	9	1024537	67509080	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	1	43718459	Rat

RH141565

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	9	q11	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	endocrine system	endoderm	exocrine system	hepatobiliary system	mesenchyme	renal system	reproductive system
2	14	14	14	14	35	19	6


RefSeq Transcripts	NM_133547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244246	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000040879 ⟹ ENSRNOP00000046569

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	4,817,854 - 4,834,255 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000061864 ⟹ ENSRNOP00000058580

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	6,962,130 - 6,971,922 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000061896 ⟹ ENSRNOP00000058611

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	4,654,294 - 4,685,383 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000065839 ⟹ ENSRNOP00000062844

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	7,112,875 - 7,129,379 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081413 ⟹ ENSRNOP00000072861

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	4,654,294 - 4,683,160 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082579 ⟹ ENSRNOP00000069149

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	6,831,219 - 7,131,245 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092159 ⟹ ENSRNOP00000071426

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	4,807,717 - 4,834,335 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106188 ⟹ ENSRNOP00000096879

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	6,745,700 - 6,848,830 (+)	Ensembl

RefSeq Acc Id:

NM_133547 ⟹ NP_598231

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	7,436,981 - 7,486,894 (+)	NCBI
mRatBN7.2	9	6,824,840 - 6,848,812 (+)	NCBI
Rnor_6.0	9	4,654,296 - 4,683,160 (-)	NCBI
Rnor_5.0	9	3,693,343 - 3,725,594 (-)	NCBI
RGSC_v3.4	9	972,522 - 998,125 (+)	RGD

Sequence:

show sequence

GACACATACTGCTTGTGCTTAAACACTAACTGTCTGCTTCTGCCCTTGAGGTATCCAGGTACCATTGTGCACTGAGCAGGACTGAAAAGAAAAAAGTTTAATCTGAAGTTTGAGCAGATTACAGCCGC
TGGGTGAAATGAAGTTTTGCACACCAAGAGGCTAGGGGAAAGCATCCCTCCTCAGTTCATCTGCTGAACATCAGCCTTCTGTTCTGTTGTGCAGGGACTAAACCTTCTTCCCTGAGACATCATGGCCC
TGGCCCCAGAATTGAGCAGACAGACAAAACTGAAAGAGGTCGCAGGGATCCCACTGCAGGCTCCAACTGTTGACAACTGGAGTCAGATTCAGACCTTCAAGGCGAAGCCAGATGACCTCCTCATCTGT
ACTTACCCTAAATCAGGGACAACATGGATTCAAGAAATTGTCGACATGATTGAGCAGAATGGGGATGTAGAGAAGTGCCAGAGGACCATCATTCAACACCGACACCCTTTTATTGAGTGGGCTCGGCC
ACCCCAACCATCAGGTGTGGACAAAGCCAATGCGATGCCAGCTCCAAGGATATTAAGGACCCATCTTCCCACTCAGCTGCTGCCACCGTCTTTCTGGACAAACAACTGTAAGTTCCTTTATGTGGCTC
GAAATGCCAAAGACTGCATGGTTTCCTACTACCACTTCTACAGGATGAGCCAGGTGCTCCCCGATCCAGGCACCTGGAATGAGTATTTTGAAACCTTCATCAATGGAAAAGTAAGTTGGGGATCTTGG
TTTGACCATGTGAAAGGATGGTGGGAAATTCGAGACAGATACCAGATTCTCTTTCTCTTCTATGAAGATGTGAAGAGGGACCCAAAGCGTGAAATCCAGAAGGTAATGCAGTTCATGGGCAAGAATTT
GGATGAAGAGGTCGTGGATAAAATAGTCCTGGAGACATCGTTTGAGAAAATGAAAGAGAATCCTATGACAAATCGTTCTACAGTCCCCAAGTCTGTCCTGGACCAGTCCATTTCCCCTTTCATGAGAA
AAGGAACTGTGGGTGATTGGAAAAACCACTTTACTGTAGCTCAGAATGACAGGTTTGATGAAATCTATAAGCAAAAGATGGGCGGAACCTCTCTAAACTTCTGCATGGAACTCTGATCAAGAAGGACA
TCTAAGAGAGGAGTCTGTCTGCAAGCCTCAATTCAGCCAAAGGAAGCTCTGAAAGCAACCTGTAAAGGCCAAGGATTGTGGCTCCTACTCTGTGATAACTAACATCACATTACCATTCATAAAAGCAT
CATGTTTAGTATATACTTCCTCCAATCTTCAGTACAAATCAGTAACACAGCTTAACGAGCTAGTAAATAAACACATAAATAAAACTCTAGTAGTATACATTTTATGATGACATTCTTCTAGAAGGTAT
AACCAGGATACTAACTCTGAAACACACATCAATAGTGATCATCTAAATTAAAGTACATGAAATCCTAAAGTCCTTCCTGTTCAGTCTGTTTTGCCTGATTACAATGGGAAGAGTCAACATGTTGCAAC
TTGTTGCAATGTGTTTAAGGGAGCGGGTTCTGTGGGAGGAAAGTGAGGGAAGAACTTCAAGGAGATGTCAGAAATCCAAGTCTTAGTAAAGGGAATCCTATTTCTAGGTCATAAAGAAACAGACAGAA
GACATGAAGGTGGCCTTTGGAAGCACAAATTGTGTCTGGACAAGAGCAGAATGGAGGCTTGATGGTCAGTGTGGAGCCAGTTGAGTTTTGATCTCCTGTCATCTCTTCTGAGGAACAGCTTGTACTTT
TGCCCACTTTAGCAGAGTCCATCTGCATTTGCTTGCCAGCATACTTCCTTCCACCTCCCACTCGCTCCATGTCTTGGGCATCCTTTTACTCCCAGTAACCAGGCAATATGGAGAACACAGCATGTTGC
ACGACTGAATGATGGCTCGTAAGACAGAAAGGCAAACATGTTTTGGGTCTCAGCACTTACCCTGTCACTTTAGTTGCAGATGTCAGCACTGCTAAGCTGAGATCAGCAGGAGCAGCCTGTGGCATGAG
CAGGATATATATGCGAGCTCAGGGTACCTAGCATGAGCTAGAATGACATTTCCTTTCAATCACTCAAATGTACACTTTCTCCTAAATGTCGAGGACGTGGGCACAGCATGTGTTACTGCCAGCAAGAG
CCATTGGAATGTGTGGTAGAAGTTAGTGGGTGGAAGCTAAGAAACGGAATGTGACCAAGAAGAGAAGGAGTGCTCCTGGCCCTTGCTTTTTCTTTCCCTTGTTTCTTGGCCATGAAAAATTCAATAAT
ATGAGGTGGGCAATTTTGCTCTGTCATTTAATTCCATGATGATATTCTATCCATCTGACCATGGAATGTAAATTCCAAAAACAAAAGCTAAAATAAAGCTTTTGTCTTTATAACTTGCTTATCCCAGA
TACTCATTAAAGTGAAAGGAAGCTCAACAACCCATTCCCAATGATGTGGCTATAAAATGCTGAAAAACATCTGTAATTTTGTTGAACTTAGAAGCAACTGTTTGGTTACTGCTAAAATATAACTATAT
GTGCATAGATAATTGACAACTTCTATGATATAAAAGATGTTTATATCCTGATTGGATTGTAAATTTTTATTGTTTTCTTCTATGTCTTCACATGTGTATTGAAGTAATTCAGTTTCTGTAAGTAATTT
GTCTGTTCTTACAATCCAAACCAAATAGAAGTTCCTATACCTTCCTCCTTTCAAGGTTAAGTTCATAACATCCCAGAGTCGCTCCAGCGTATTTAAGGCACAGCTTGTGTCTTCAGCCAGGTGCTGTT
TAACAGTAAATTTGGGGTAAATTGTTGAAACTTGTTGGTGATGAACTTAAGCCTCTATTGGCTTTGTCTTGCTTGGAGTTTACCTTTCTACTCAGAATTGAAAATAACAGTAACTTGTAAAGTTGTTC
AAAATTGTAAAACATATAATGTTAGTTTAGTAAGTGTAAGATAATTTACCCACTGGTAATTTTAACTATTACTTTTGGAGCAAAGAATGAATAAAGTAAATGAAATATTAAAAAAAAAAAAAAAAAAA
AAAAAAAA

hide sequence


Protein RefSeqs	NP_598231	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000062844
GenBank Protein	Q9WUW8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_598231 ⟸ NM_133547

- UniProtKB:

A0A8I6ARK1 (UniProtKB/TrEMBL), A0A0G2JUM0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MALAPELSRQTKLKEVAGIPLQAPTVDNWSQIQTFKAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCQRTIIQHRHPFIEWARPPQPSGVDKANAMPAPRILRTHLPTQLLPPSFWTNNCKFLY
VARNAKDCMVSYYHFYRMSQVLPDPGTWNEYFETFINGKVSWGSWFDHVKGWWEIRDRYQILFLFYEDVKRDPKREIQKVMQFMGKNLDEEVVDKIVLETSFEKMKENPMTNRSTVPKSVLDQSISPF
MRKGTVGDWKNHFTVAQNDRFDEIYKQKMGGTSLNFCMEL

hide sequence

Ensembl Acc Id:

ENSRNOP00000071426 ⟸ ENSRNOT00000092159

Ensembl Acc Id:

ENSRNOP00000072861 ⟸ ENSRNOT00000081413

Ensembl Acc Id:

ENSRNOP00000058611 ⟸ ENSRNOT00000061896

Ensembl Acc Id:

ENSRNOP00000046569 ⟸ ENSRNOT00000040879

Protein Domains

Sulfotransferase

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9WUW8-F1-model_v2	AlphaFold	Q9WUW8	1-296	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13696424

Promoter ID:

EPDNEW_R6949

Type:

initiation region

Name:

LOC100910526_1

Description:

sulfotransferase 1C2-like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R6950

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	4,683,172 - 4,683,232	EPDNEW

RGD ID:

13696426

Promoter ID:

EPDNEW_R6950

Type:

initiation region

Name:

LOC100910526_2

Description:

sulfotransferase 1C2-like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R6949

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	4,685,397 - 4,685,457	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-28390	BioCyc
Ensembl Genes	ENSRNOG00000040215	Ensembl
	ENSRNOG00000050885	Ensembl
	ENSRNOG00000065530	Ensembl
	ENSRNOG00000067413	ENTREZGENE
Ensembl Transcript	ENSRNOT00000065839	ENTREZGENE
Gene3D-CATH	3.40.50.300	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7106590	IMAGE-MGC_LOAD
	IMAGE:7108290	IMAGE-MGC_LOAD
InterPro	P-loop_NTPase	UniProtKB/Swiss-Prot
	Sulfotransferase_dom	UniProtKB/Swiss-Prot
KEGG Report	rno:171072	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:112625	IMAGE-MGC_LOAD
	MGC:124969	IMAGE-MGC_LOAD
NCBI Gene	171072	ENTREZGENE
PANTHER	SULFOTRANSFERASE SULT	UniProtKB/Swiss-Prot
Pfam	Sulfotransfer_1	UniProtKB/Swiss-Prot
PhenoGen	Sult1c2	PhenoGen
RatGTEx	ENSRNOG00000040215	RatGTEx
	ENSRNOG00000050885	RatGTEx
	ENSRNOG00000065530	RatGTEx
	ENSRNOG00000067413	RatGTEx
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot
UniProt	A0A0G2JUM0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZKG4_RAT	UniProtKB/TrEMBL
	A0A8I6ARK1	ENTREZGENE, UniProtKB/TrEMBL
	F1LZI5_RAT	UniProtKB/TrEMBL
	Q9WUW8	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	F1LZL1	UniProtKB/Swiss-Prot
	Q3ZAV3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Sult1c2	sulfotransferase family 1C member 2	LOC100910526	sulfotransferase 1C2-like	Data merged from RGD:6497849	737654	PROVISIONAL
2015-11-12	Sult1c2	sulfotransferase family 1C member 2	Sult1c2	sulfotransferase family, cytosolic, 1C, member 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-05	LOC100910526	sulfotransferase 1C2-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-07-08	Sult1c2	sulfotransferase family, cytosolic, 1C, member 2			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Sult1c2	sulfotransferase family, cytosolic, 1C, member 2			Symbol and Name status set to provisional	70820	PROVISIONAL

Note Type	Note	Reference
gene_expression	expressed in kidney proximal tubule epithelial cells, in the epithelium of gastric mucosal glands and of bile duct, and in hepatocytes	634073

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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