Itih3 (inter-alpha trypsin inhibitor, heavy chain 3) - Rat Genome Database

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Gene: Itih3 (inter-alpha trypsin inhibitor, heavy chain 3) Rattus norvegicus
Analyze
Symbol: Itih3
Name: inter-alpha trypsin inhibitor, heavy chain 3
RGD ID: 620633
Description: Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in hyaluronan metabolic process. Predicted to be located in extracellular region. Orthologous to human ITIH3 (inter-alpha-trypsin inhibitor heavy chain 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: inter-alpha-inhibitor heavy chain 3; inter-alpha-trypsin inhibitor heavy chain H3; ITI heavy chain H3; ITI-HC3; PAIHC3; pre-alpha-inhibitor heavy chain 3; pre-alpha-inhibitor, heavy chain 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,108,378 - 6,123,609 (-)NCBIGRCr8
mRatBN7.2166,101,922 - 6,117,154 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,101,930 - 6,116,924 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx166,113,241 - 6,128,042 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,258,702 - 7,273,506 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,120,667 - 6,135,331 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0166,983,779 - 7,007,288 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl166,992,062 - 7,007,287 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0166,910,530 - 6,933,416 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,341,043 - 6,358,767 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1166,341,044 - 6,358,765 (-)NCBI
Celera169,072,721 - 9,087,644 (+)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itih3Ratcongenital disorder of glycosylation In  ISOITIH3 (Homo sapiens)8554872ClinVar Annotator: match by term: Congenital disorder of glycosylation type 1NClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itih3Rathepatocellular carcinoma  ISOITIH3 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19363144

1 to 20 of 113 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itih3Rat(1->4)-beta-D-glucan multiple interactionsISOItih3 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of ITIH3 mRNACTDPMID:36331819
Itih3Rat1,1-dichloroethene increases expressionISOItih3 (Mus musculus)6480464vinylidene chloride results in increased expression of ITIH3 mRNACTDPMID:26682919
Itih3Rat1,2-dichloroethane increases expressionISOItih3 (Mus musculus)6480464ethylene dichloride results in increased expression of ITIH3 mRNACTDPMID:28189721 and PMID:28960355
Itih3Rat1,2-dimethylhydrazine increases expressionISOItih3 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of ITIH3 mRNACTDPMID:22206623
Itih3Rat17alpha-ethynylestradiol affects expressionISOItih3 (Mus musculus)6480464Ethinyl Estradiol affects the expression of ITIH3 mRNACTDPMID:17555576
Itih3Rat17beta-estradiol increases expressionISOItih3 (Mus musculus)6480464Estradiol results in increased expression of ITIH3 mRNACTDPMID:39298647
Itih3Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOITIH3 (Homo sapiens)64804642 more ...CTDPMID:31675489
Itih3Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOItih3 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of ITIH3 mRNACTDPMID:18343893 and PMID:28922406
Itih3Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of ITIH3 mRNACTDPMID:34747641
Itih3Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ITIH3 mRNACTDPMID:32109520
Itih3Rat2,3,7,8-Tetrachlorodibenzofuran affects expressionISOItih3 (Mus musculus)64804642 more ...CTDPMID:18343893
Itih3Rat2,3-dimethoxynaphthalene-1,4-dione decreases expressionISOITIH3 (Homo sapiens)64804642 more ...CTDPMID:17547211
Itih3Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOItih3 (Mus musculus)64804642 more ...CTDPMID:38648751
Itih3Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of ITIH3 mRNACTDPMID:21346803
Itih3Rat3,3',5,5'-tetrabromobisphenol A decreases expressionISOITIH3 (Homo sapiens)6480464tetrabromobisphenol A results in decreased expression of ITIH3 proteinCTDPMID:31675489
Itih3Rat4,4'-sulfonyldiphenol increases expressionISOItih3 (Mus musculus)6480464bisphenol S results in increased expression of ITIH3 mRNACTDPMID:39298647
Itih3Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of ITIH3 mRNACTDPMID:24780913 and PMID:30085217
Itih3Rat6-propyl-2-thiouracil multiple interactionsISOItih3 (Mus musculus)6480464[Propylthiouracil co-treated with Iodine deficiency] results in decreased expression of ITIH3 mRNACTDPMID:36706583
Itih3Rat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of ITIH3 mRNACTDPMID:30047161
Itih3Rataflatoxin B1 decreases expressionISOITIH3 (Homo sapiens)6480464Aflatoxin B1 results in decreased expression of ITIH3 mRNACTDPMID:27153756

1 to 20 of 113 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itih3Rathyaluronan metabolic process involved_inIEAInterPro:IPR0106001600115GO_REF:0000002InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itih3Ratextracellular region located_inIEAUniProtKB-SubCell:SL-02431600115GO_REF:0000044UniProtGO_REF:0000044
Itih3Ratextracellular region  TAS 1299283 RGD 
Itih3Ratextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itih3Ratpeptidase inhibitor activity enablesIEAUniProtKB-KW:KW-06461600115GO_REF:0000043UniProtGO_REF:0000043
Itih3Ratprotein binding enablesISOITIH3 (Homo sapiens)1624291UniProtKB:P02760-PRO_0000017887 and PMID:16873769RGDPMID:16873769
Itih3Ratserine-type endopeptidase inhibitor activity enablesIEAUniProtKB-KW:KW-07221600115GO_REF:0000043UniProtGO_REF:0000043
Itih3Ratserine-type endopeptidase inhibitor activity enablesIEAInterPro:IPR0106001600115GO_REF:0000002InterProGO_REF:0000002


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Intracellular coupling of the heavy chain of pre-alpha-inhibitor to chondroitin sulfate. Kaczmarczyk A, etal., J Biol Chem 2002 Apr 19;277(16):13578-82. Epub 2002 Feb 4.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:1299283   PMID:23533145   PMID:29476059  



Itih3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,108,378 - 6,123,609 (-)NCBIGRCr8
mRatBN7.2166,101,922 - 6,117,154 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,101,930 - 6,116,924 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx166,113,241 - 6,128,042 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,258,702 - 7,273,506 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,120,667 - 6,135,331 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0166,983,779 - 7,007,288 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl166,992,062 - 7,007,287 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0166,910,530 - 6,933,416 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,341,043 - 6,358,767 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1166,341,044 - 6,358,765 (-)NCBI
Celera169,072,721 - 9,087,644 (+)NCBICelera
Cytogenetic Map16p16NCBI
ITIH3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38352,794,796 - 52,808,797 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl352,794,768 - 52,808,799 (+)EnsemblGRCh38hg38GRCh38
GRCh37352,828,812 - 52,842,813 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36352,803,824 - 52,818,065 (+)NCBINCBI36Build 36hg18NCBI36
Build 34352,803,853 - 52,817,854NCBI
Celera352,807,505 - 52,821,742 (+)NCBICelera
Cytogenetic Map3p21.1NCBI
HuRef352,890,445 - 52,904,683 (+)NCBIHuRef
CHM1_1352,780,986 - 52,795,224 (+)NCBICHM1_1
T2T-CHM13v2.0352,827,705 - 52,841,707 (+)NCBIT2T-CHM13v2.0
Itih3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391430,630,529 - 30,645,748 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1430,630,529 - 30,645,717 (-)EnsemblGRCm39 Ensembl
GRCm381430,908,572 - 30,923,787 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1430,908,572 - 30,923,760 (-)EnsemblGRCm38mm10GRCm38
MGSCv371431,721,758 - 31,736,773 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361429,737,582 - 29,752,553 (-)NCBIMGSCv36mm8
Celera1427,165,744 - 27,180,756 (-)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.09NCBI
Itih3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554302,753,996 - 2,767,324 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554302,753,974 - 2,767,436 (+)NCBIChiLan1.0ChiLan1.0
ITIH3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2252,786,787 - 52,803,297 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1352,791,574 - 52,807,958 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0352,733,966 - 52,750,198 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1353,961,476 - 53,976,065 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl353,961,451 - 53,976,065 (+)Ensemblpanpan1.1panPan2
ITIH3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,032,485 - 37,035,941 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,003,374 - 37,017,395 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02037,372,140 - 37,386,102 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2037,372,141 - 37,386,063 (-)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.02037,144,184 - 37,158,164 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02037,421,715 - 37,435,675 (-)NCBIUU_Cfam_GSD_1.0
Itih3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118170,414,614 - 170,430,165 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364733,553,210 - 3,568,636 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364733,553,210 - 3,568,636 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ITIH3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,906,538 - 34,933,706 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11334,911,104 - 34,924,881 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21338,106,334 - 38,120,182 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ITIH3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12214,176,656 - 14,191,256 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2214,177,334 - 14,191,353 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041152,706,611 - 152,721,211 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Itih3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248224,416,074 - 4,429,623 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248224,415,962 - 4,429,660 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Itih3
115 total Variants

Predicted Target Of
Summary Value
Count of predictions:204
Count of miRNA genes:143
Interacting mature miRNAs:157
Transcripts:ENSRNOT00000023984, ENSRNOT00000041216
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 30 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1619639137Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat

1 to 10 of 30 rows
RH130520  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,101,941 - 6,102,137 (+)MAPPERmRatBN7.2
Rnor_6.0166,992,090 - 6,992,285NCBIRnor6.0
Rnor_5.0166,918,696 - 6,918,891UniSTSRnor5.0
RGSC_v3.4166,341,059 - 6,341,254UniSTSRGSC3.4
Celera169,087,433 - 9,087,628UniSTS
RH 3.4 Map1644.0UniSTS
Cytogenetic Map16p16UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 31 105 91 90 59 25 59 6 193 79 85 38 60 31



Ensembl Acc Id: ENSRNOT00000023984   ⟹   ENSRNOP00000023984
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,101,930 - 6,116,924 (-)Ensembl
Rnor_6.0 Ensembl166,992,171 - 7,007,051 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000041216   ⟹   ENSRNOP00000043221
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,101,930 - 6,116,917 (-)Ensembl
Rnor_6.0 Ensembl166,992,062 - 7,007,287 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109614   ⟹   ENSRNOP00000094283
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,101,930 - 6,116,924 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110525   ⟹   ENSRNOP00000094838
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,101,930 - 6,116,924 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000115678   ⟹   ENSRNOP00000080066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,101,930 - 6,116,917 (-)Ensembl
RefSeq Acc Id: NM_017351   ⟹   NP_059047
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,108,378 - 6,123,374 (-)NCBI
mRatBN7.2166,101,926 - 6,116,924 (-)NCBI
Rnor_6.0166,992,074 - 7,007,058 (-)NCBI
Rnor_5.0166,910,530 - 6,933,416 (-)NCBI
RGSC_v3.4166,341,043 - 6,358,767 (-)RGD
Celera169,072,721 - 9,087,644 (+)RGD
Sequence:
RefSeq Acc Id: XM_063275656   ⟹   XP_063131726
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,114,783 - 6,123,604 (-)NCBI
RefSeq Acc Id: XM_063275657   ⟹   XP_063131727
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,108,378 - 6,123,609 (-)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_059047 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131726 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131727 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAA58233 (Get FASTA)   NCBI Sequence Viewer  
  EDL88977 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000023984
  ENSRNOP00000023984.4
  ENSRNOP00000094838
GenBank Protein Q63416 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_059047   ⟸   NM_017351
- Peptide Label: precursor
- UniProtKB: Q63416 (UniProtKB/Swiss-Prot),   A6KG20 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000043221   ⟸   ENSRNOT00000041216
Ensembl Acc Id: ENSRNOP00000023984   ⟸   ENSRNOT00000023984
Ensembl Acc Id: ENSRNOP00000080066   ⟸   ENSRNOT00000115678
Ensembl Acc Id: ENSRNOP00000094838   ⟸   ENSRNOT00000110525
VIT   VWFA

Name Modeler Protein Id AA Range Protein Structure
AF-Q63416-F1-model_v2 AlphaFold Q63416 1-887 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13699916
Promoter ID:EPDNEW_R10440
Type:multiple initiation site
Name:Itih3_1
Description:inter-alpha trypsin inhibitor, heavy chain 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0167,007,059 - 7,007,119EPDNEW


1 to 31 of 31 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-12175 BioCyc
Ensembl Genes ENSRNOG00000017689 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000023984 ENTREZGENE
  ENSRNOT00000023984.7 UniProtKB/Swiss-Prot
  ENSRNOT00000110525 ENTREZGENE
Gene3D-CATH 3.40.50.410 UniProtKB/Swiss-Prot
InterPro ITI_HC_C UniProtKB/Swiss-Prot
  ITIH UniProtKB/Swiss-Prot
  VIT UniProtKB/Swiss-Prot
  VWF_A UniProtKB/Swiss-Prot
  vWFA_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:50693 UniProtKB/Swiss-Prot
NCBI Gene 50693 ENTREZGENE
PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER UniProtKB/Swiss-Prot
  INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN H3 UniProtKB/Swiss-Prot
Pfam ITI_HC_C UniProtKB/Swiss-Prot
  VIT UniProtKB/Swiss-Prot
  VWA UniProtKB/Swiss-Prot
PhenoGen Itih3 PhenoGen
PROSITE VIT UniProtKB/Swiss-Prot
  VWFA UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000017689 RatGTEx
SMART VIT UniProtKB/Swiss-Prot
  VWA UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53300 UniProtKB/Swiss-Prot
UniProt A0A8I5ZPG2_RAT UniProtKB/TrEMBL
  A0A8I6ALV3_RAT UniProtKB/TrEMBL
  A0A8I6GKX5 ENTREZGENE, UniProtKB/TrEMBL
  A6KG20 ENTREZGENE, UniProtKB/TrEMBL
  D3ZBS2_RAT UniProtKB/TrEMBL
  ITIH3_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 31 of 31 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-01-20 Itih3  inter-alpha trypsin inhibitor, heavy chain 3  PAIHC3  pre-alpha-inhibitor, heavy chain 3  Symbol and Name updated 1299863 APPROVED
2002-08-07 PAIHC3  pre-alpha-inhibitor, heavy chain 3      Symbol and Name status set to provisional 70820 PROVISIONAL