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Gene: Foxj2 (forkhead box J2) Rattus norvegicus

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Symbol:

Foxj2

Name:

forkhead box J2

RGD ID:

1565101

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and identical protein binding activity. Predicted to be involved in several processes, including male meiosis I; negative regulation of blood vessel endothelial cell differentiation; and positive regulation of vascular associated smooth muscle cell proliferation. Predicted to be located in fibrillar center and nucleoplasm. Predicted to be active in nucleus. Orthologous to human FOXJ2 (forkhead box J2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

forkhead box protein J2; LOC502886; RGD1565101; similar to fork head transcription factor Fhx

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FOXJ2 (forkhead box J2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Foxj2 (forkhead box J2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Foxj2 (forkhead box J2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FOXJ2 (forkhead box J2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FOXJ2 (forkhead box J2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Foxj2 (forkhead box J2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FOXJ2 (forkhead box J2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FOXJ2 (forkhead box J2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Foxj2 (forkhead box J2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	FOXJ2 (forkhead box J2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Foxj2 (forkhead box J2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	foxj2 (forkhead box J2)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	fd102C	Alliance	DIOPT (Ensembl Compara\|Hieranoid)
Xenopus tropicalis (tropical clawed frog):	foxj2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	157,718,990 - 157,745,468 (+)	NCBI		GRCr8
mRatBN7.2	4	156,047,043 - 156,073,540 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	156,046,969 - 156,073,518 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	162,317,196 - 162,343,161 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	158,100,418 - 158,126,383 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	156,745,505 - 156,771,468 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	155,653,446 - 155,679,815 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	155,653,718 - 155,679,793 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	222,674,331 - 222,700,694 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	159,295,252 - 159,321,208 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	144,867,747 - 144,893,819 (+)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Foxj2	Rat	developmental and epileptic encephalopathy 21		ISO	FOXJ2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 21	ClinVar	PMID:18712838 more ...
Foxj2	Rat	Hyperphosphatemic Familial Tumoral Calcinosis 1		ISO	FOXJ2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Tumoral calcinosis more ...	ClinVar	PMID:25378588 and PMID:29389098
Foxj2	Rat	Klippel-Feil syndrome 3		ISO	FOXJ2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Klippel-Feil syndrome 3 and autosomal dominant	ClinVar	PMID:28492532
Foxj2	Rat	lymphoproliferative syndrome 2		ISO	FOXJ2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Lymphoproliferative syndrome 2	ClinVar	PMID:28492532
Foxj2	Rat	peroxisome biogenesis disorder 2B		ISO	FOXJ2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Peroxisome biogenesis disorder 2B	ClinVar	PMID:18712838 more ...
Foxj2	Rat	Temtamy syndrome		ISO	FOXJ2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Temtamy syndrome	ClinVar	PMID:28492532

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Foxj2	Rat	(S)-colchicine	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Colchicine results in decreased expression of FOXJ2 mRNA	CTD	PMID:24211769
Foxj2	Rat	1,2-dimethylhydrazine	decreases expression	ISO	Foxj2 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in decreased expression of FOXJ2 mRNA	CTD	PMID:22206623
Foxj2	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Foxj2 (Mus musculus)	6480464	Tetrachlorodibenzodioxin results in increased expression of FOXJ2 mRNA	CTD	PMID:24058054
Foxj2	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of FOXJ2 mRNA	CTD	PMID:33387578
Foxj2	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Foxj2 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of FOXJ2 mRNA	CTD	PMID:21570461
Foxj2	Rat	2-methylcholine	affects expression	ISO	FOXJ2 (Homo sapiens)	6480464	beta-methylcholine affects the expression of FOXJ2 mRNA	CTD	PMID:21179406
Foxj2	Rat	4,4'-sulfonyldiphenol	decreases expression	ISO	Foxj2 (Mus musculus)	6480464	bisphenol S results in decreased expression of FOXJ2 mRNA	CTD	PMID:39298647
Foxj2	Rat	6-propyl-2-thiouracil	decreases expression	EXP		6480464	Propylthiouracil results in decreased expression of FOXJ2 mRNA	CTD	PMID:30047161
Foxj2	Rat	adenine	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Adenine results in decreased expression of FOXJ2 mRNA	CTD	PMID:24211769
Foxj2	Rat	Aflatoxin B2 alpha	increases methylation	ISO	FOXJ2 (Homo sapiens)	6480464	aflatoxin B2 results in increased methylation of FOXJ2 intron	CTD	PMID:30157460
Foxj2	Rat	all-trans-retinoic acid	increases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Tretinoin results in increased expression of FOXJ2 mRNA	CTD	PMID:23724009
Foxj2	Rat	amitrole	decreases expression	EXP		6480464	Amitrole results in decreased expression of FOXJ2 mRNA	CTD	PMID:30047161
Foxj2	Rat	antirheumatic drug	increases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Antirheumatic Agents results in increased expression of FOXJ2 mRNA	CTD	PMID:24449571
Foxj2	Rat	arsenite(3-)	multiple interactions	ISO	FOXJ2 (Homo sapiens)	6480464	arsenite inhibits the reaction [G3BP1 protein binds to FOXJ2 mRNA]	CTD	PMID:32406909
Foxj2	Rat	benzo[a]pyrene	increases expression	ISO	Foxj2 (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of FOXJ2 mRNA	CTD	PMID:22228805
Foxj2	Rat	bis(2-ethylhexyl) phthalate	increases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Diethylhexyl Phthalate results in increased expression of FOXJ2 mRNA	CTD	PMID:31163220
Foxj2	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of FOXJ2 mRNA	CTD	PMID:25181051
Foxj2	Rat	bisphenol A	decreases methylation	ISO	FOXJ2 (Homo sapiens)	6480464	bisphenol A results in decreased methylation of FOXJ2 gene	CTD	PMID:31601247
Foxj2	Rat	bisphenol A	affects methylation	ISO	Foxj2 (Mus musculus)	6480464	bisphenol A affects the methylation of FOXJ2 promoter	CTD	PMID:27334623
Foxj2	Rat	butanal	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	butyraldehyde results in decreased expression of FOXJ2 mRNA	CTD	PMID:26079696
Foxj2	Rat	cadmium atom	multiple interactions	ISO	FOXJ2 (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of FOXJ2 mRNA	CTD	PMID:35301059
Foxj2	Rat	cadmium dichloride	multiple interactions	ISO	FOXJ2 (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of FOXJ2 mRNA	CTD	PMID:35301059
Foxj2	Rat	caffeine	increases phosphorylation	ISO	FOXJ2 (Homo sapiens)	6480464	Caffeine results in increased phosphorylation of FOXJ2 protein	CTD	PMID:35688186
Foxj2	Rat	chlorpyrifos	increases expression	ISO	Foxj2 (Mus musculus)	6480464	Chlorpyrifos results in increased expression of FOXJ2 mRNA	CTD	PMID:37019170
Foxj2	Rat	cisplatin	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Cisplatin results in decreased expression of FOXJ2 mRNA	CTD	PMID:24211769
Foxj2	Rat	cisplatin	increases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Cisplatin results in increased expression of FOXJ2 mRNA	CTD	PMID:27594783
Foxj2	Rat	cyclosporin A	increases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Cyclosporine results in increased expression of FOXJ2 mRNA	CTD	PMID:25562108
Foxj2	Rat	Dibutyl phosphate	affects expression	ISO	FOXJ2 (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of FOXJ2 mRNA	CTD	PMID:37042841
Foxj2	Rat	dicrotophos	increases expression	ISO	FOXJ2 (Homo sapiens)	6480464	dicrotophos results in increased expression of FOXJ2 mRNA	CTD	PMID:28302478
Foxj2	Rat	doxorubicin	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Doxorubicin results in decreased expression of FOXJ2 mRNA	CTD	PMID:29803840
Foxj2	Rat	ethyl methanesulfonate	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Ethyl Methanesulfonate results in decreased expression of FOXJ2 mRNA	CTD	PMID:24211769
Foxj2	Rat	etoposide	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Etoposide results in decreased expression of FOXJ2 mRNA	CTD	PMID:24211769
Foxj2	Rat	fenthion	decreases expression	ISO	Foxj2 (Mus musculus)	6480464	Fenthion results in decreased expression of FOXJ2 mRNA	CTD	PMID:34813904
Foxj2	Rat	hydroxyurea	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Hydroxyurea results in decreased expression of FOXJ2 mRNA	CTD	PMID:24211769
Foxj2	Rat	isobutanol	multiple interactions	ISO	FOXJ2 (Homo sapiens)	6480464	[[Gasoline co-treated with isobutyl alcohol] results in increased abundance of [Particulate Matter co-treated with Polycyclic Aromatic Hydrocarbons]] which results in decreased expression of FOXJ2 mRNA	CTD	PMID:29432896
Foxj2	Rat	methimazole	decreases expression	EXP		6480464	Methimazole results in decreased expression of FOXJ2 mRNA	CTD	PMID:30047161
Foxj2	Rat	mitomycin C	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Mitomycin results in decreased expression of FOXJ2 mRNA	CTD	PMID:24211769
Foxj2	Rat	pentanal	decreases expression	ISO	FOXJ2 (Homo sapiens)	6480464	pentanal results in decreased expression of FOXJ2 mRNA	CTD	PMID:26079696
Foxj2	Rat	perfluorooctanoic acid	increases expression	ISO	FOXJ2 (Homo sapiens)	6480464	perfluorooctanoic acid results in increased expression of FOXJ2 mRNA	CTD	PMID:36326898
Foxj2	Rat	phenobarbital	decreases expression	EXP		6480464	Phenobarbital results in decreased expression of FOXJ2 mRNA	CTD	PMID:30047161
Foxj2	Rat	resveratrol	multiple interactions	ISO	FOXJ2 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in decreased expression of FOXJ2 mRNA	CTD	PMID:23557933
Foxj2	Rat	rotenone	increases expression	EXP		6480464	Rotenone results in increased expression of FOXJ2 mRNA	CTD	PMID:19013527
Foxj2	Rat	sulfadimethoxine	decreases expression	EXP		6480464	Sulfadimethoxine results in decreased expression of FOXJ2 mRNA	CTD	PMID:30047161
Foxj2	Rat	titanium dioxide	decreases methylation	ISO	Foxj2 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of FOXJ2 promoter	CTD	PMID:35295148
Foxj2	Rat	tunicamycin	increases expression	ISO	FOXJ2 (Homo sapiens)	6480464	Tunicamycin results in increased expression of FOXJ2 mRNA	CTD	PMID:22378314

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Foxj2	Rat	male meiosis I	involved_in	ISO	Foxj2 (Mus musculus)	1624291	PMID:27316861	RGD	PMID:27316861
Foxj2	Rat	male meiosis I	involved_in	IEA	UniProtKB:Q9ES18 and ensembl:ENSMUSP00000003238	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	negative regulation of angiogenesis	involved_in	ISO	FOXJ2 (Homo sapiens)	1624291	PMID:24792364	RGD	PMID:24792364
Foxj2	Rat	negative regulation of angiogenesis	involved_in	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	negative regulation of blood vessel endothelial cell differentiation	involved_in	ISO	FOXJ2 (Homo sapiens)	1624291	PMID:24792364	RGD	PMID:24792364
Foxj2	Rat	negative regulation of blood vessel endothelial cell differentiation	involved_in	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	positive regulation of DNA-templated transcription	involved_in	ISO	FOXJ2 (Homo sapiens) and UniProtKB:Q9P0K8-1	1624291	PMID:10777590	RGD	PMID:10777590
Foxj2	Rat	positive regulation of DNA-templated transcription	involved_in	ISO	FOXJ2 (Homo sapiens) more ...	1624291	PMID:10966786	RGD	PMID:10966786
Foxj2	Rat	positive regulation of transcription by RNA polymerase II	involved_in	ISO	FOXJ2 (Homo sapiens)	1624291	PMID:10777590	RGD	PMID:10777590
Foxj2	Rat	positive regulation of transcription by RNA polymerase II	involved_in	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	positive regulation of vascular associated smooth muscle cell proliferation	involved_in	ISO	FOXJ2 (Homo sapiens)	1624291	PMID:24792364	RGD	PMID:24792364
Foxj2	Rat	positive regulation of vascular associated smooth muscle cell proliferation	involved_in	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	regulation of DNA-templated transcription	involved_in	IEA	InterPro:IPR001766 and InterPro:IPR030456	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Foxj2	Rat	regulation of transcription by RNA polymerase II	involved_in	IBA	PANTHER:PTN002918318 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Foxj2	Rat	spermatogenesis	involved_in	ISO	Foxj2 (Mus musculus)	1624291	PMID:27316861	RGD	PMID:27316861
Foxj2	Rat	spermatogenesis	involved_in	IEA	UniProtKB:Q9ES18 and ensembl:ENSMUSP00000003238	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Foxj2	Rat	fibrillar center	located_in	ISO	FOXJ2 (Homo sapiens) and UniProtKB:Q9P0K8-1	1624291		RGD	GO_REF:0000052
Foxj2	Rat	fibrillar center	located_in	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	nucleoplasm	located_in	ISO	FOXJ2 (Homo sapiens) and UniProtKB:Q9P0K8-1	1624291		RGD	GO_REF:0000052
Foxj2	Rat	nucleoplasm	located_in	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Foxj2	Rat	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Foxj2	Rat	nucleus	is_active_in	IBA	PANTHER:PTN002918318 and UniProtKB:Q9P0K8	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Foxj2	Rat	nucleus	located_in	IEA	UniRule:UR000413741	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Foxj2	Rat	nucleus	located_in	ISO	FOXJ2 (Homo sapiens)	1624291	PMID:24792364	RGD	PMID:24792364
Foxj2	Rat	nucleus	located_in	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Foxj2	Rat	DNA binding	enables	IEA	UniRule:UR000413741	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Foxj2	Rat	DNA binding	enables	IEA	UniProtKB-KW:KW-0238	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Foxj2	Rat	DNA-binding transcription activator activity, RNA polymerase II-specific	enables	ISO	FOXJ2 (Homo sapiens)	1624291	PMID:10777590	RGD	PMID:10777590
Foxj2	Rat	DNA-binding transcription activator activity, RNA polymerase II-specific	enables	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	DNA-binding transcription factor activity	enables	IEA	InterPro:IPR001766 and InterPro:IPR030456	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Foxj2	Rat	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IBA	PANTHER:PTN002918318 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Foxj2	Rat	identical protein binding	enables	ISO	FOXJ2 (Homo sapiens)	1624291	UniProtKB:Q9P0K8 and PMID:25609649	RGD	PMID:25609649
Foxj2	Rat	identical protein binding	enables	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	protein binding	enables	ISO	FOXJ2 (Homo sapiens)	1624291	UniProtKB:Q9H0L4 more ...	RGD	PMID:25416956 and PMID:32296183
Foxj2	Rat	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	ISO	FOXJ2 (Homo sapiens)	1624291	PMID:10777590	RGD	PMID:10777590
Foxj2	Rat	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IBA	PANTHER:PTN002918318 and UniProtKB:Q9P0K8	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Foxj2	Rat	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Foxj2	Rat	sequence-specific DNA binding	enables	ISO	FOXJ2 (Homo sapiens) and UniProtKB:Q9P0K8-1	1624291	PMID:10777590	RGD	PMID:10777590
Foxj2	Rat	sequence-specific DNA binding	enables	IEA	InterPro:IPR001766 and InterPro:IPR030456	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Foxj2	Rat	sequence-specific double-stranded DNA binding	enables	ISO	FOXJ2 (Homo sapiens)	1624291	PMID:28473536	RGD	PMID:28473536
Foxj2	Rat	sequence-specific double-stranded DNA binding	enables	IEA	UniProtKB:Q9P0K8 and ensembl:ENSP00000162391	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:10777590	PMID:10966786	PMID:22246994	PMID:24792364	PMID:25609649

Foxj2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	157,718,990 - 157,745,468 (+)	NCBI		GRCr8
mRatBN7.2	4	156,047,043 - 156,073,540 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	156,046,969 - 156,073,518 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	162,317,196 - 162,343,161 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	158,100,418 - 158,126,383 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	156,745,505 - 156,771,468 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	155,653,446 - 155,679,815 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	155,653,718 - 155,679,793 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	222,674,331 - 222,700,694 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	159,295,252 - 159,321,208 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	144,867,747 - 144,893,819 (+)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

FOXJ2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	8,032,716 - 8,055,517 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	8,032,716 - 8,055,517 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	8,185,312 - 8,208,113 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	8,076,626 - 8,099,385 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	8,076,625 - 8,099,384	NCBI
Celera	12	9,762,431 - 9,785,190 (+)	NCBI		Celera
Cytogenetic Map	12	p13.31	NCBI
HuRef	12	7,996,913 - 8,019,846 (+)	NCBI		HuRef
CHM1_1	12	8,184,575 - 8,207,342 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	8,046,312 - 8,069,122 (+)	NCBI		T2T-CHM13v2.0

Foxj2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	122,797,143 - 122,822,325 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	122,796,873 - 122,822,325 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	122,820,184 - 122,845,366 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	122,819,914 - 122,845,366 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	122,770,202 - 122,795,384 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	122,786,130 - 122,810,982 (+)	NCBI		MGSCv36	mm8
Celera	6	124,622,347 - 124,647,534 (+)	NCBI		Celera
Cytogenetic Map	6	F2	NCBI
cM Map	6	57.91	NCBI

Foxj2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	6,686,398 - 6,703,173 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	6,692,343 - 6,705,760 (+)	NCBI	ChiLan1.0	ChiLan1.0

FOXJ2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	13,586,695 - 13,611,942 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	13,585,787 - 13,608,715 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	8,152,037 - 8,175,291 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	8,194,519 - 8,217,778 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	8,194,519 - 8,217,778 (+)	Ensembl	panpan1.1		panPan2

FOXJ2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	37,412,148 - 37,430,861 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	37,411,358 - 37,428,887 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	9,185,094 - 9,204,722 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	37,765,223 - 37,784,865 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	37,765,255 - 37,784,853 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	37,640,826 - 37,659,521 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	37,681,129 - 37,700,782 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	8,671,639 - 8,691,483 (-)	NCBI		UU_Cfam_GSD_1.0

Foxj2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	99,140,505 - 99,158,922 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936892	331,239 - 344,624 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936892	324,103 - 344,739 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FOXJ2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	63,061,978 - 63,085,037 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	63,061,978 - 63,087,689 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

FOXJ2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	8,101,982 - 8,125,764 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	8,109,340 - 8,125,743 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666089	195,607 - 219,438 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Foxj2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624860	5,176,257 - 5,195,682 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624860	5,176,301 - 5,195,715 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Foxj2
151 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	847
Count of miRNA genes:	298
Interacting mature miRNAs:	395
Transcripts:	ENSRNOT00000065419
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	144639524	182687754	Rat
724558	Plsm2	Polydactyly-luxate syndrome (PLS) morphotypes QTL 2		0.0003	hindlimb integrity trait (VT:0010563)	hind foot phalanges count (CMO:0001949)	4	132422778	177422778	Rat
1582237	Kidm34	Kidney mass QTL 34	4	0.0001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	4	148090542	168069246	Rat
61446	Coreg2	Compensatory renal growth QTL 2	3.5		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	4	148423102	157580971	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	144639524	182687754	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	26775591	168368347	Rat
631683	Bp116	Blood pressure QTL 116		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	124303370	169303370	Rat
61451	Ciaa4	CIA Autoantibody QTL 4	3.1		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	4	126395976	167139601	Rat
1331802	Srn5	Serum renin concentration QTL 5	3.045		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	4	119428175	157578333	Rat
1331738	Bp209	Blood pressure QTL 209	2.979		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	138503169	179293946	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	138503169	173369699	Rat
10053718	Scort25	Serum corticosterone level QTL 25	2.15	0.0097	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	155561574	182687754	Rat
1549827	Scl46	Serum cholesterol level QTL 46	3.5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	4	132396220	177396220	Rat
634335	Anxrr16	Anxiety related response QTL 16	7.22		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	93308457	167139447	Rat
737821	Hcar9	Hepatocarcinoma resistance QTL 9	3.7		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	4	109866907	167139601	Rat
7411558	Bw133	Body weight QTL 133	13.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	125590636	170590636	Rat
6478778	Anxrr51	Anxiety related response QTL 51		0.25384	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	124778595	169778595	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	145568712	182687754	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
631511	Pia7	Pristane induced arthritis QTL 7	4.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	131730738	167139601	Rat
1581574	Eae20	Experimental allergic encephalomyelitis QTL 20	7.8		nervous system integrity trait (VT:0010566)	percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)	4	153031106	158841762	Rat
731178	Oia7	Oil induced arthritis QTL 7		0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	156050654	157232313	Rat
634347	Hcar8	Hepatocarcinoma resistance QTL 8	5.8		liver integrity trait (VT:0010547)	liver tumorous lesion area to total liver area ratio (CMO:0001075)	4	123143783	168143783	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	4	83428419	177635233	Rat
2303623	Vencon2	Ventilatory control QTL 2	3.8		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	4	135204660	180204660	Rat
1578674	Bmd12	Bone mineral density QTL 12	3.8		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	4	135699135	180699135	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	0.02	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	85379421	167139601	Rat
61422	Cia13	Collagen induced arthritis QTL 13	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	132642577	167139601	Rat
634342	Cia24	Collagen induced arthritis QTL 24	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	146565735	175236377	Rat
737978	Pia23	Pristane induced arthritis QTL 23	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	131730738	167139601	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	138503169	173369699	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	64528739	157573521	Rat
12798519	Anxrr54	Anxiety related response QTL 54	2.54	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	114627026	159627026	Rat
2293659	Bmd35	Bone mineral density QTL 35	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	4	137755016	181392681	Rat
1331759	Hrtrt13	Heart rate QTL 13	3.54628		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	110275411	168266883	Rat
724535	Cm18	Cardiac mass QTL 18	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	4	118856416	163856416	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	11320076	180699135	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
12798525	Anxrr57	Anxiety related response QTL 57	3.21	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	147278504	167139601	Rat

D4Got126

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	156,050,654 - 156,050,920 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	155,657,051 - 155,657,314	NCBI	Rnor6.0
Rnor_5.0	4	222,677,930 - 222,678,193	UniSTS	Rnor5.0
RGSC_v3.4	4	159,298,584 - 159,298,848	RGD	RGSC3.4
RGSC_v3.4	4	159,298,585 - 159,298,848	UniSTS	RGSC3.4
RGSC_v3.1	4	159,543,521 - 159,543,784	RGD
Celera	4	144,871,081 - 144,871,344	UniSTS
RH 3.4 Map	4	997.3	RGD
RH 3.4 Map	4	997.3	UniSTS
Cytogenetic Map	4	q42	UniSTS

RH134938

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	156,073,235 - 156,073,416 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	155,679,511 - 155,679,691	NCBI	Rnor6.0
Rnor_5.0	4	222,700,390 - 222,700,570	UniSTS	Rnor5.0
RGSC_v3.4	4	159,320,926 - 159,321,106	UniSTS	RGSC3.4
Celera	4	144,893,537 - 144,893,717	UniSTS
RH 3.4 Map	4	1001.8	UniSTS
Cytogenetic Map	4	q42	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001109352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000065419 ⟹ ENSRNOP00000062121

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	156,047,322 - 156,073,518 (+)	Ensembl
Rnor_6.0 Ensembl	4	155,653,718 - 155,679,793 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087883 ⟹ ENSRNOP00000069705

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	156,046,969 - 156,073,518 (+)	Ensembl
Rnor_6.0 Ensembl	4	155,654,911 - 155,679,753 (+)	Ensembl

RefSeq Acc Id:

NM_001109352 ⟹ NP_001102822

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	157,719,259 - 157,745,450 (+)	NCBI
mRatBN7.2	4	156,047,322 - 156,073,518 (+)	NCBI
Rnor_6.0	4	155,653,718 - 155,679,793 (+)	NCBI
Rnor_5.0	4	222,674,331 - 222,700,694 (+)	NCBI
RGSC_v3.4	4	159,295,252 - 159,321,208 (+)	RGD
Celera	4	144,867,747 - 144,893,819 (+)	RGD

Sequence:

show sequence

CCCAGTGCCCGGACCTGCCCCTCTCCCTTGGGAGGGGGGACCCTCCCCACTCCCGGGACAGCCAGAAGAGACCGCCGCAGGGCACGCGGCTGTCCCTCCCACGGTGGCTCTAGAGGAGACCCCTAGAA
GTCGGACCTGAAGGACCTGGAGTGAGACCTCACGCCTCAACGCACGCCAGACAGTTCGGGACTTTTGAGGCAGAGAGAAAGGGAGCCATGCCTGTGGAGTAGGCACCCCGCGTCCCACCCGGGACTCA
CCGCGGAGAGGCGTCCTGACACGCACAGCCAGGACCCTCCAGGGAACCGCCAGGAATTGGTTCCAGTTTGCTGGAGAGTAGAAGACCTCGCCCCTCAACTTCCGTGCACCCAGACAGTGGACCGGGGC
CGAGCCCCTCCGCTCAGATCACCAACTGACAGAAAGAGCCCTCAGCCCCTGAAAGATCCAGTTTGGGGGGGGAGGGGGATTCCCCCAAAGGGGAGGAGACAACTCCTGGCTGGGAGAGGCTCCTCCCC
TCCTCCCTAGGGTAGCAGGCAGGGTGTGGGGGGTGTGCCATCTTCCCCAGGTAGGTCCTCCCTCTCCCCCTCCTCCTCCTTCGATTCCTCGTCCTCAGGGGACTCAGTTCCCCGCTCCAGCCTGGGAG
GCTCCGCCAGGCACTGGAAGAGTCACTGAGGATGTCACCTGTCACCTGCCACTAAAGAGGGGAGTCCCTGCAACCTCAAACTTCAGTACCAGGTGGTTTCCTCCAGCGGCCGGGGGAACCTTGGAGAC
AGAACCTGGAAGTACAATGGCCTCCGACCTGGAGAGTAGCCTCACCTCCATAGACTGGCTGCCACAGCTGACTCTCAGAGCCACTATTGAGAAGCTTGGGAGTGCTTCTCAGGCTGGGCCTCCAGGGG
GCACCCGGAAGTGCTCGCCAGGCTCCCCGACAGATCCAAACGCCACCCTCAGCAAAGATGAGGCATCAGTCCACCAAGATGGCAAGCCGCGGTACAGCTATGCCACCCTCATCACCTACGCCATCAAT
TCCTCTCCAGCTAAGAAGATGACTCTCAGTGAGATTTACCGCTGGATCTGCGACAACTTCCCCTATTACAAGAACGCCGGCATCGGCTGGAAGAATTCCATTCGACACAACCTTTCCCTTAACAAGTG
TTTCCGGAAGGTGCCCAGACCTCGGGATGATCCTGGGAAGGGCTCCTATTGGACAATTGACACCTGCCCTGACATTTCCCGGAAGAGAAGACACCCTCCAGATGATGACCTATCCCAAGACTCCCCAG
AGCAGGAGGCCAGCAAGAGCCCCCGGGGAGGTGTTCCAGGGAGTGGAGAAGCCTCACTCTCTCATGAGGGCAATCCTCAGATGTCACTGCAGAGCCCCTCCTCCATGGCCAGCTACAGCCAGGGCCCA
GGGCCTGTGGATGGTGGAGCAGTGGCAGCAGGGGCCCCAGGCCAGGAGAGCACAGAGGGTGCCCCTCCCCTCTACAACACCAACCATGACTTCAAATTCTCCTACTCCGAGATCAACTTTCAGGACCT
AAGCTGGTCCTTCCGAAACCTCTACAAGTCCATGCTGGAGCGGTCCTCCTCCTCCCAGCACGGCTTTTCCTCACTCCTTGGAGACATGCCACCTTCCAACAACTATTACATGTACCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCCACCGCCGCAGCCTCAGCCCCCACCCCAGCAACCACAACCGCAGCAGCAGCAGGCACCCACTCAG
GGCCCCTCAAATGTAGGGGGTGCCCCTCCACTGCACACCCCAAGCCCCGATGGCTGTACTACACCAGGGGGAAAACAGGCAGGAGCTGAAGTCTACGGCCCCCCCACTGGGATGGCCATGCACCCTCC
CCCACTGCAGCATGGAGGCTACCACCCTCATCAGCACCATCCCCACTCCCACCCTGCCCAGCAGCCACCACAGCAGCAGGCACAGAGCCAGGCACCCATCAACAGCACCGGCTTTGCCTTTCCTCCAG
ACTGGTGCTCCAATATTGACTCCTTAAAGGAAAGCTTCAAAATGGTGAACCGGCTCAACTGGTCCAGCATCGAGCAATCCCAGTTCTCAGAGCTGATGGAGAGCCTACGGCAGGCAGAGCAGAGGAAC
TGGACCCTCGATCAGCATCACATCGCCAACTTGTGTGACTCCCTCAACCACTTCCTCACCCAGACTGGTCACATGCCCCCGCAAGGGGGCTCCCACCGACCACCTGCCCCTTCCCGGATCACTGACTC
CTGTGCTCTCACCAGTGGCAAACCGGAGCCATCTATGAACCAAGTGAACTCTTATGGGCACCCGCAAGCCTCTCATCTCTACCCTGGCCCAGCACCAATGTACCCAATCTCCACCCAAGACTCAGCAG
GATACAGTCGCCCAACACACCACATGGTTCCCCGGCCACCTGTCCCACCTCCTGGTGCCAATGAGGAGATCACTGATGACTTCGACTGGGACTTGATCACTTAACAAATCACAGTGGACATCAGCCTA
AGACCTGGTGGTGAATTCTAGCCACGGGGGAAGAACAGTCCTGTCCATCCTCCCCAAACCTGTATATAGATATATAGCTTCCTTCTGTTCTCTCTGTCAGAGAAGCCACTGCAAGATGCTGCCGAGGA
TAATCCTCTTTCCCTCCTCATTCTTCGTTCCCTTTTAGTTCTTTTATTATTATTCTAATTATATTGTTATTGGTTATCTGCTGCCCAGTCTCCTGCCCTCCTACCCTGGGCTTTGCCCATTTGAAATC
TTCAGGCCTCAAGATGAGGCCATGATAGCTGTCAAGGAAGGCTTTACATTCTAGTTCACCTTTCTGTCCGAGAAGCTCAGTGCTGATCCCACCTTCCAGCTCTGAATTGTGTTCTGGTCCTGCCTGTT
TCAGGCTGGCCTGCAGAGGCCTCAGTCAGTAGAGGGGAGTCTAAGACACTGCTTGGCAACCATAATGTTGCAGCTTTACTCAATGGTGCTAATTGTGTCCTCTGAGCTCGCCTATTAAACACCCAATC
TTTACTATGTTCGGCAGTCCTCATGCCATGACGGCTGGACTTGGAGAGCTGGGCTCGGTGGAGTCGGTATAACCCAGCGTGAGGTTGGGTGTGCACTGCCATGCCAAAGCACCCCTGGCTTCTCCCAG
CCGTTGCTCTAGGAGGTTTGCTTGTCTGCTCAGGCACAAAGACCACTGTCCATCATAGTTTAGCTTCTCGGAAACAATTTCAATTTAAGGCATTTTGGCTTTGGAAAAGGAATTCTTTCTGAGAGTTA
ACTGACTATTCTGCATATATCAATGACCTTCCATCATCTCTTCTTCTTCAGCAAATACTATTTTGTCTTCCTAAAGCTGTTTGTCCAAATCATCCACCTGTCTTATCTTTTGTTCTCCCATTTTCTGG
GATTCTCAAAAAGACAAAAGGAAGCCATTCTCACTCCTAGTCCCCTCATGTCGTAGACATGCTGTGGAAACCTCTTTCCCTCCCGCCTTGGCAGACCTGTGGTCCTGCTGCTGGGAGGGTGGGGAAGT
TAGGGAGCTGGCGTAGACCTGGGTGGGGACCTGTCACTGCGCAGGGAGATGCTTCTCTTGAAGTTCCTGTTGGTGGGGTGGAAGCTTTTGATTTTGACAGGCAATGAAAACTGTAAGACGGAAATGAC
TAATACAGAGTCAGGGCTCAGCGAGGGCAAGGCGCACCCGTAGGCTCGGAGTGAGGAGTCTCCACTAAAATGAGCAGCCATGACTTACGGCTGCAGAGTTCTTAGCACGTGTGTGGCTGTCTTGCGAG
AGAGAAGTCCAGTCTCACTTCCATCGTATTTTCACTAAACCTTCTGGAACAGACAAAATGTGTTGTATCTTCCACAGGGCCAACCTCTGTGATTTTTGTTCATATTCTCTTATTTATCCACGATTTCC
GAGACACTGAGCTTCCCATTCTCACTTCCCCTCATCAACCCCTTTCCTTTCTTTAGAAGGGGGCTTATGTATGAGACTGGTGGAGTCCAGTGAAGTAAAGGGGGCAAGATGGGGGCAGTTCACTGAAG
AGCACTTTATTTCTTTGTAAGGAAAATAAAAGGGAGTATAAGGAAAAAGAGTGCGCTCCAGCACAGTGTGCAGTGTACTGGAGAGCATCTGGTAGGGCCGATGCATGACAGACGCAATGTTTCCCTCC
CGGGAGAGGGGTGTTTCCCCACACACACCCTGCCTGGTGTCCTACTAGACATCTCTTGCTGTTCCTTCCATTCAGGTGTATTCTACACGGCTTCCCTTTGGTTTCCTCAAGGTCTTGCCCTTGCACAG
TACCACCTCTTTTCCTAAGCACCTTTCCTGGTCAGATCTGTCCCAGGTTGGGGGGCATAGGCTGAGTCATACTTCCAGATGCCCCTGGCTTCTCCATGTCTTGAGAGCCAGTCTCCCTGGTGGGCAGC
CTGAGCAGCTGCCTTGGGCTGGAGACTGGAGGGTGGCTTTAGGGCCCCCTGAGGCTCTAGCCTCTCCTGGGTCAGGCTTGCAGAATGGGGCAGTTCAAACCTGGTCCCCCTTGGGCCTCAGTTTCCCA
TGCCCTCTGTGACATGGAAAGAGAACTACACTTATTTTGTTGGTCCGATGTTGCTGGACATGAAGTATAGTCATTGCTGTTGTCTTGGGTGATGTGTGCACAGTTGTAGGGGTCACTGCCTGTAAGAG
GAAACAGGGGAGACAGCAGAGGAGCAGGACAAAGGAGAAGTCATTTGTGTTGATTCACCTATCCTAGGCTTCCTCTCCTCAACCCCATGTTTCTGGTTTGGTGAGTTCTTTACACCACCCATAATGCT
TTGCATTGGTGCAGGCTGGGAAGGGGGGGTGTATGGGCTCACAACTTGTTTGGTTTTTTTTTTTTTTTGTTTTGTTTTTATTTTTGTTTTGTTTTTGTTTTTTTGCATGCTTTCTT

hide sequence

RefSeq Acc Id:

XM_006237311 ⟹ XP_006237373

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	157,718,992 - 157,745,468 (+)	NCBI
mRatBN7.2	4	156,047,049 - 156,073,540 (+)	NCBI
Rnor_6.0	4	155,653,446 - 155,679,815 (+)	NCBI
Rnor_5.0	4	222,674,331 - 222,700,694 (+)	NCBI

Sequence:

show sequence

GGCCTGCAGCGGAGCCGAGCCGAGCCCGAGCCGAGCCCCGACGCGCTCCGTCCGCCTGCCGGCTCCTGGGAGCCCCGACCGGCTGGAGCCTCAGAGGCGGCAGCGCGGGGAGTTCCACGCGCCGGGAA
GCGCGGCGGACAGGGGACGCGACCAGGGAGGCGCTGCCGCCCGGCAGCTGGTAACCGGAGCCGGGACCGCGGCCTCCGGGACCCTGCTGCCCAGGCCGGCCGGCCGGGCGGGAACGGGAGTGCGAGGA
CCCCACCCTTGGGGCACCCAGTGCCCGGACCTGCCCCTCTCCCTTGGGAGGGGGGACCCTCCCCACTCCCGGGACAGCCAGAAGAGACCGCCGCAGGGCACGCGGCTGTCCCTCCCACGGTGGCTCTA
GAGGAGACCCCTAGAAGTCGGACCTGAAGGACCTGGAGTGAGACCTCACGCCTCAACGCACGCCAGACAGTTCGGGACTTTTGAGGCAGAGAGAAAGGGAGCCATGCCTGTGGAGTAGGCACCCCGCG
TCCCACCCGGGACTCACCGCGGAGAGGCGTCCTGACACGCACAGCCAGGACCCTCCAGGGAACCGCCAGGAATTGGTTCCAGTTTGCTGGAGAGTAGAAGACCTCGCCCCTCAACTTCCGTGCACCCA
GACAGTGGACCGGGGCCGAGCCCCTCCGCTCAGATCACCAACTGACAGAAAGAGCCCTCAGCCCCTGAAAGATCCAGTTTGGGGGGGAGGGGGATTCCCCCAAAGGGGAGGAGACAACTCCTGGCTGG
GAGAGGCTCCTCCCCTCCTCCCTAGGGTAGCAGGCAGGGTGTGGGGGGTGTGCCATCTTCCCCAGGTAGGTCCTCCCTCTCCCCCTCCTCCTCCTTCGATTCCTCGTCCTCAGGGGACTCAGTTCCCC
GCTCCAGCCTGGGAGGCTCCGCCAGGCACTGGAAGAGTCACTGAGGATGTCACCTGTCACCTGCCACTAAAGAGGGGAGTCCCTGCAACCTCAAACTTCAGTACCAGGTGGTTTCCTCCAGCGGCCGG
GGGAACCTTGGAGACAGGGCATGCCTAGGTCGGTTTAATATTCAACAGGAACCTTCTTTCCAGTCTATCACAATGACTGCTTGCCTGACTGACTGGCAACCGGTCCCTACCCACTCTATCTTGGATGC
CAGGAGGGAGGCCCCTACTTCAGGCTGGATATCTGCCTCTCTGTGTAAAAGCCAAGGGGAAATGCGAATCCTCATGTCCCGGGATGAGAAGAGACTGTCAGGAACCTGGAAGTACAATGGCCTCCGAC
CTGGAGAGTAGCCTCACCTCCATAGACTGGCTGCCACAGCTGACTCTCAGAGCCACTATTGAGAAGCTTGGGAGTGCTTCTCAGGCTGGGCCTCCAGGGGGCACCCGGAAGTGCTCGCCAGGCTCCCC
GACAGATCCAAACGCCACCCTCAGCAAAGATGAGGCATCAGTCCACCAAGATGGCAAGCCGCGGTACAGCTATGCCACCCTCATCACCTACGCCATCAATTCCTCTCCAGCTAAGAAGATGACTCTCA
GTGAGATTTACCGCTGGATCTGCGACAACTTCCCCTATTACAAGAACGCCGGCATCGGCTGGAAGAATTCCATTCGACACAACCTTTCCCTTAACAAGTGTTTCCGGAAGGTGCCCAGACCTCGGGAT
GATCCTGGGAAGGGCTCCTATTGGACAATTGACACCTGCCCTGACATTTCCCGGAAGAGAAGACACCCTCCAGATGATGACCTATCCCAAGACTCCCCAGAGCAGGAGGCCAGCAAGAGCCCCCGGGG
AGGTGTTCCAGGGAGTGGAGAAGCCTCACTCTCTCATGAGGGCAATCCTCAGATGTCACTGCAGAGCCCCTCCTCCATGGCCAGCTACAGCCAGGGCCCAGGGCCTGTGGATGGTGGAGCAGTGGCAG
CAGGGGCCCCAGGCCAGGAGAGCACAGAGGGTGCCCCTCCCCTCTACAACACCAACCATGACTTCAAATTCTCCTACTCCGAGATCAACTTTCAGGACCTAAGCTGGTCCTTCCGAAACCTCTACAAG
TCCATGCTGGAGCGGTCCTCCTCCTCCCAGCACGGCTTTTCCTCACTCCTTGGAGACATGCCACCTTCCAACAACTATTACATGTACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCCACCGCCGCAGCCTCAGCCCCCACCCCAGCAACCACAACCGCAGCAGCAGCAGGCACCCACTCAGGGCCCCTCAAATGTAGGGGGTGCCCCTC
CACTGCACACCCCAAGCCCCGATGGCTGTACTACACCAGGGGGAAAACAGGCAGGAGCTGAAGTCTACGGCCCCCCCACTGGGATGGCCATGCACCCTCCCCCACTGCAGCATGGAGGCTACCACCCT
CATCAGCACCATCCCCACTCCCACCCTGCCCAGCAGCCACCACAGCAGCAGGCACAGAGCCAGGCACCCATCAACAGCACCGGCTTTGCCTTTCCTCCAGACTGGTGCTCCAATATTGACTCCTTAAA
GGAAAGCTTCAAAATGGTGAACCGGCTCAACTGGTCCAGCATCGAGCAATCCCAGTTCTCAGAGCTGATGGAGAGCCTACGGCAGGCAGAGCAGAGGAACTGGACCCTCGATCAGCATCACATCGCCA
ACTTGTGTGACTCCCTCAACCACTTCCTCACCCAGACTGGTCACATGCCCCCGCAAGGGGGCTCCCACCGACCACCTGCCCCTTCCCGGATCACTGACTCCTGTGCTCTCACCAGTGGCAAACCGGAG
CCATCTATGAACCAAGTGAACTCTTATGGGCACCCGCAAGCCTCTCATCTCTACCCTGGCCCAGCACCAATGTACCCAATCTCCACCCAAGACTCAGCAGGATACAGTCGCCCAACACACCACATGGT
TCCCCGGCCACCTGTCCCACCTCCTGGTGCCAATGAGGAGATCACTGATGACTTCGACTGGGACTTGATCACTTAACAAATCACAGTGGACATCAGCCTAAGACCTGGTGGTGAATTCTAGCCACGGG
GGAAGAACAGTCCTGTCCATCCTCCCCAAACCTGTATATAGATATATAGCTTCCTTCTGTTCTCTCTGTCAGAGAAGCCACTGCAAGATGCTGCCGAGGATAATCCTCTTTCCCTCCTCATTCTTCGT
TCCCTTTTAGTTCTTTTATTATTATTCTAATTATATTGTTATTGGTTATCTGCTGCCCAGTCTCCTGCCCTCCTACCCTGGGCTTTGCCCATTTGAAATCTTCAGGCCTCAAGATGAGGCCATGATAG
CTGTCAAGGAAGGCTTTACATTCTAGTTCACCTTTCTGTCCGAGAAGCTCAGTGCTGATCCCACCTTCCAGCTCTGAATTGTGTTCTGGTCCTGCCTGTTTCAGGCTGGCCTGCAGAGGCCTCAGTCA
GTAGAGGGGAGTCTAAGACACTGCTTGGCAACCATAATGTTGCAGCTTTACTCAATGGTGCTAATTGTGTCCTCTGAGCTCGCCTATTAAACACCCAATCTTTACTATGTTCGGCAGTCCTCATGCCA
TGACGGCTGGACTTGGAGAGCTGGGCTCGGTGGAGTCGGTATAACCCAGCGTGAGGTTGGGTGTGCACTGCCATGCCAAAGCACCCCTGGCTTCTCCCAGCCGTTGCTCTAGGAGGTTTGCTTGTCTG
CTCAGGCACAAAGACCACTGTCCATCATAGTTTAGCTTCTCGGAAACAATTTCAATTTAAGGCATTTTGGCTTTGGAAAAGGAATTCTTTCTGAGAGTTAACTGACTATTCTGCATATATCAATGACC
TTCCATCATCTCTTCTTCTTCAGCAAATACTATTTTGTCTTCCTAAAGCTGTTTGTCCAAATCATCCACCTGTCTTATCTTTTGTTCTCCCATTTTCTGGGATTCTCAAAAAGACAAAAGGAAGCCAT
TCTCACTCCTAGTCCCCTCATGTCGTAGACATGCTGTGGAAACCTCTTTCCCTCCCGCCTTGGCAGACCTGTGGTCCTGCTGCTGGGAGGGTGGGGAAGTTAGGGAGCTGGCGTAGACCTGGGTGGGG
ACCTGTCACTGCGCAGGGAGATGCTTCTCTTGAAGTTCCTGTTGGTGGGGTGGAAGCTTTTGATTTTGACAGGCAATGAAAACTGTAAGACGGAAATGACTAATACAGAGTCAGGGCTCAGCGAGGGC
AAGGCGCACCCGTAGGCTCGGAGTGAGGAGTCTCCACTAAAATGAGCAGCCATGACTTACGGCTGCAGAGTTCTTAGCACGTGTGTGGCTGTCTTGCGAGAGAGAAGTCCAGTCTCACTTCCATCGTA
TTTTCACTAAACCTTCTGGAACAGACAAAATGTGTTGTATCTTCCACAGGGCCAACCTCTGTGATTTTTGTTCATATTCTCTTATTTATCCACGATTTCCGAGACACTGAGCTTCCCATTCTCACTTC
CCCTCATCAACCCCTTTCCTTTCTTTAGAAGGGGGCTTATGTATGAGACTGGTGGAGTCCAGTGAAGTAAAGGGGGCAAGATGGGGGCAGTTCACTGAAGAGCACTTTATTTCTTTGTAAGGAAAATA
AAAGGGAGTATAAGGAAAAAGAGTGCGCTCCAGCACAGTGTGCAGTGTACTGGAGAGCATCTGGTAGGGCCGATGCATGACAGACGCAATGTTTCCCTCCCGGGAGAGGGGTGTTTCCCCACACACAC
CCTGCCTGGTGTCCTACTAGACATCTCTTGCTGTTCCTTCCATTCAGGTGTATTCTACACGGCTTCCCTTTGGTTTCCTCAAGGTCTTGCCCTTGCACAGTACCACCTCTTTTCCTAAGCACCTTTCC
TGGTCAGATCTGTCCCAGGTTGGGGGGCATAGGCTGAGTCATACTTCCAGATGCCCCTGGCTTCTCCATGTCTTGAGAGCCAGTCTCCCTGGTGGGCAGCCTGAGCAGCTGCCTTGGGCTGGAGACTG
GAGGGTGGCTTTAGGGCCCCCTGAGGCTCTAGCCTCTCCTGGGTCAGGCTTGCAGAATGGGGCAGTTCAAACCTGGTCCCCCTTGGGCCTCAGTTTCCCATGCCCTCTGTGACATGGAAAGAGAACTA
CACTTATTTTGTTGGTCCGATGTTGCTGGACATGAAGTATAGTCATTGCTGTTGTCTTGGGTGATGTGTGCACAGTTGTAGGGGTCACTGCCTGTAAGAGGAAACAGGGGAGACAGCAGAGGAGCAGG
ACAAAGGAGAAGTCATTTGTGTTGATTCACCTATCCTAGGCTTCCTCTCCTCAACCCCATGTTTCTGGTTTGGTGAGTTCTTTACACCACCCATAATGCTTTGCATTGGTGCAGGCTGGGAAGGGGGG
GTGTATGGGCTCACAACTTGTTTGGTTTTTTTTTTTTTTTGTTTTGTTTTTATTTTTGTTTTGTTTTTGTTTTTTTGCATGCTTTCTTAATAAAAAAAGAAAAGAACGTT

hide sequence

RefSeq Acc Id:

XM_039108257 ⟹ XP_038964185

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	157,718,990 - 157,745,468 (+)	NCBI
mRatBN7.2	4	156,047,047 - 156,073,540 (+)	NCBI


Protein RefSeqs	NP_001102822	(Get FASTA)	NCBI Sequence Viewer
	XP_006237373	(Get FASTA)	NCBI Sequence Viewer
	XP_038964185	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM01979	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000062121
	ENSRNOP00000062121.1
	ENSRNOP00000069705
	ENSRNOP00000069705.1

RefSeq Acc Id:

NP_001102822 ⟸ NM_001109352

- UniProtKB:

D3Z992 (UniProtKB/TrEMBL), A6ILG0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASDLESSLTSIDWLPQLTLRATIEKLGSASQAGPPGGTRKCSPGSPTDPNATLSKDEASVHQDGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVP
RPRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDSPEQEASKSPRGGVPGSGEASLSHEGNPQMSLQSPSSMASYSQGPGPVDGGAVAAGAPGQESTEGAPPLYNTNHDFKFSYSEINFQDLSWSFR
NLYKSMLERSSSSQHGFSSLLGDMPPSNNYYMYQQQQQQQQQQQQQQQQQQQQQQQQQPPPQPQPPPQQPQPQQQQAPTQGPSNVGGAPPLHTPSPDGCTTPGGKQAGAEVYGPPTGMAMHPPPLQHG
GYHPHQHHPHSHPAQQPPQQQAQSQAPINSTGFAFPPDWCSNIDSLKESFKMVNRLNWSSIEQSQFSELMESLRQAEQRNWTLDQHHIANLCDSLNHFLTQTGHMPPQGGSHRPPAPSRITDSCALTS
GKPEPSMNQVNSYGHPQASHLYPGPAPMYPISTQDSAGYSRPTHHMVPRPPVPPPGANEEITDDFDWDLIT

hide sequence

RefSeq Acc Id:	XP_006237373 ⟸ XM_006237311
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JW18 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPGGRPLLQAGYLPLCVKAKGKCESSCPGMRRDCQEPGSTMASDLESSLTSIDWLPQLTLRATIEKLGSASQAGPPGGTRKCSPGSPTDPNATLSKDEASVHQDGKPRYSYATLITYAINSSPAKKMT LSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDSPEQEASKSPRGGVPGSGEASLSHEGNPQMSLQSPSSMASYSQGPGPVDGGAV AAGAPGQESTEGAPPLYNTNHDFKFSYSEINFQDLSWSFRNLYKSMLERSSSSQHGFSSLLGDMPPSNNYYMYQQQQQQQQQQQQQQQQQQQQQQQQQPPPQPQPPPQQPQPQQQQAPTQGPSNVGGA PPLHTPSPDGCTTPGGKQAGAEVYGPPTGMAMHPPPLQHGGYHPHQHHPHSHPAQQPPQQQAQSQAPINSTGFAFPPDWCSNIDSLKESFKMVNRLNWSSIEQSQFSELMESLRQAEQRNWTLDQHHI ANLCDSLNHFLTQTGHMPPQGGSHRPPAPSRITDSCALTSGKPEPSMNQVNSYGHPQASHLYPGPAPMYPISTQDSAGYSRPTHHMVPRPPVPPPGANEEITDDFDWDLIT hide sequence

Ensembl Acc Id:

ENSRNOP00000069705 ⟸ ENSRNOT00000087883

Ensembl Acc Id:

ENSRNOP00000062121 ⟸ ENSRNOT00000065419

RefSeq Acc Id:	XP_038964185 ⟸ XM_039108257
- Peptide Label:	isoform X2

Protein Domains

Fork-head

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JW18-F1-model_v2	AlphaFold	A0A0G2JW18	1-623	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-43142	BioCyc
Ensembl Genes	ENSRNOG00000009000	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000065419	ENTREZGENE
	ENSRNOT00000065419.3	UniProtKB/TrEMBL
	ENSRNOT00000087883	ENTREZGENE
	ENSRNOT00000087883.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.10	UniProtKB/TrEMBL
InterPro	FH_FOXJ2	UniProtKB/TrEMBL
	FOXJ2/3-like	UniProtKB/TrEMBL
	TF_fork_head	UniProtKB/TrEMBL
	TF_fork_head_CS_2	UniProtKB/TrEMBL
	WH-like_DNA-bd_sf	UniProtKB/TrEMBL
	WH_DNA-bd_sf	UniProtKB/TrEMBL
KEGG Report	rno:502886	UniProtKB/TrEMBL
NCBI Gene	502886	ENTREZGENE
PANTHER	FORKHEAD BOX PROTEIN J2	UniProtKB/TrEMBL
	PTHR46078	UniProtKB/TrEMBL
Pfam	Fork_head	UniProtKB/TrEMBL
PhenoGen	Foxj2	PhenoGen
PRINTS	FORKHEAD	UniProtKB/TrEMBL
PROSITE	FORK_HEAD_2	UniProtKB/TrEMBL
	FORK_HEAD_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000009000	RatGTEx
SMART	SM00339	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46785	UniProtKB/TrEMBL
UniProt	A0A0G2JW18	ENTREZGENE, UniProtKB/TrEMBL
	A6ILG0	ENTREZGENE, UniProtKB/TrEMBL
	D3Z992	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-06	Foxj2	forkhead box J2	RGD1565101_predicted	similar to fork head transcription factor Fhx (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1565101_predicted	similar to fork head transcription factor Fhx (predicted)	LOC502886	similar to fork head transcription factor Fhx	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC502886	similar to fork head transcription factor Fhx			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar