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Gene: Rab7b (Rab7b, member RAS oncogene family) Rattus norvegicus

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Symbol:

Rab7b

Name:

Rab7b, member RAS oncogene family

RGD ID:

1562617

Description:

Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in several processes, including late endosome to Golgi transport; regulation of gene expression; and regulation of pattern recognition receptor signaling pathway. Predicted to act upstream of or within cellular response to type II interferon. Predicted to be located in trans-Golgi network. Predicted to be active in late endosome; lysosome; and phagocytic vesicle. Orthologous to human RAB7B (RAB7B, member RAS oncogene family); PARTICIPATES IN Entamoebiasis pathway; phagocytosis pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC501854; ras-related protein Rab-7b; RGD1562617; similar to RAB7-like protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	45,673,396 - 45,699,798 (+)	NCBI		GRCr8
mRatBN7.2	13	43,121,168 - 43,147,581 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	43,121,226 - 43,147,581 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	45,724,566 - 45,751,219 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	47,012,704 - 47,039,362 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	44,277,285 - 44,303,944 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	48,456,143 - 48,483,714 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	48,455,923 - 48,482,138 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	53,528,328 - 53,554,460 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	44,620,063 - 44,636,864 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	13	43,459,652 - 43,485,905 (+)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab7b	Rat	autistic disorder		ISO	RAB7B (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 and PMID:30208311

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab7b	Rat	Acute Coronary Syndrome		ISO	RAB7B (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:21751358
Rab7b	Rat	osteoporosis		ISO	RAB7B (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:18924182

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab7b	Rat	(1->4)-beta-D-glucan	multiple interactions	ISO	Rab7b (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of RAB7B mRNA	CTD	PMID:36331819
Rab7b	Rat	1-naphthyl isothiocyanate	increases expression	EXP		6480464	1-Naphthylisothiocyanate results in increased expression of RAB7B mRNA	CTD	PMID:30723492
Rab7b	Rat	17beta-estradiol	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[Estradiol co-treated with TGFB1 protein] results in decreased expression of RAB7B mRNA	CTD	PMID:30165855
Rab7b	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of RAB7B mRNA	CTD	PMID:34747641
Rab7b	Rat	2,4-dibromophenyl 2,4,5-tribromophenyl ether	affects expression	ISO	Rab7b (Mus musculus)	6480464	2 more ...	CTD	PMID:38648751
Rab7b	Rat	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of RAB7B mRNA	CTD	PMID:28628672
Rab7b	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	Rab7b (Mus musculus)	6480464	bisphenol S results in increased expression of RAB7B mRNA	CTD	PMID:30951980
Rab7b	Rat	4-hydroxyphenyl retinamide	decreases expression	ISO	Rab7b (Mus musculus)	6480464	Fenretinide results in decreased expression of RAB7B mRNA	CTD	PMID:28973697
Rab7b	Rat	6-propyl-2-thiouracil	decreases expression	EXP		6480464	Propylthiouracil results in decreased expression of RAB7B mRNA	CTD	PMID:24780913
Rab7b	Rat	acetamide	increases expression	EXP		6480464	acetamide results in increased expression of RAB7B mRNA	CTD	PMID:31881176
Rab7b	Rat	aflatoxin B1	increases expression	ISO	RAB7B (Homo sapiens)	6480464	Aflatoxin B1 results in increased expression of RAB7B mRNA	CTD	PMID:22100608
Rab7b	Rat	aflatoxin B1	increases expression	EXP		6480464	Aflatoxin B1 results in increased expression of RAB7B mRNA	CTD	PMID:25378103
Rab7b	Rat	atrazine	affects methylation	EXP		6480464	Atrazine affects the methylation of RAB7B gene	CTD	PMID:28931070
Rab7b	Rat	bisphenol A	decreases expression	ISO	Rab7b (Mus musculus)	6480464	bisphenol A results in decreased expression of RAB7B mRNA	CTD	PMID:26063408
Rab7b	Rat	bisphenol A	increases expression	ISO	Rab7b (Mus musculus)	6480464	bisphenol A results in increased expression of RAB7B mRNA	CTD	PMID:30951980
Rab7b	Rat	bisphenol A	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of RAB7B mRNA	CTD	PMID:28628672
Rab7b	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of RAB7B mRNA	CTD	PMID:30816183 more ...
Rab7b	Rat	bisphenol A	increases expression	ISO	RAB7B (Homo sapiens)	6480464	bisphenol A results in increased expression of RAB7B mRNA	CTD	PMID:27685785
Rab7b	Rat	butanal	increases expression	ISO	RAB7B (Homo sapiens)	6480464	butyraldehyde results in increased expression of RAB7B mRNA	CTD	PMID:26079696
Rab7b	Rat	cadmium atom	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of RAB7B mRNA	CTD	PMID:35301059
Rab7b	Rat	cadmium dichloride	decreases expression	ISO	RAB7B (Homo sapiens)	6480464	Cadmium Chloride results in decreased expression of RAB7B mRNA	CTD	PMID:38568856
Rab7b	Rat	cadmium dichloride	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of RAB7B mRNA	CTD	PMID:35301059
Rab7b	Rat	cannabidiol	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[PSEN1 protein affects the susceptibility to Cannabidiol] which affects the expression of RAB7B mRNA	CTD	PMID:33096116
Rab7b	Rat	cobalt dichloride	increases expression	ISO	RAB7B (Homo sapiens)	6480464	cobaltous chloride results in increased expression of RAB7B mRNA	CTD	PMID:22941251
Rab7b	Rat	cobalt dichloride	increases expression	EXP		6480464	cobaltous chloride results in increased expression of RAB7B mRNA	CTD	PMID:24386269
Rab7b	Rat	copper atom	increases expression	EXP		6480464	Copper deficiency results in increased expression of RAB7B mRNA	CTD	PMID:26033743
Rab7b	Rat	copper(0)	increases expression	EXP		6480464	Copper deficiency results in increased expression of RAB7B mRNA	CTD	PMID:26033743
Rab7b	Rat	dexamethasone	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of RAB7B mRNA	CTD	PMID:28628672
Rab7b	Rat	dorsomorphin	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Rab7b	Rat	endosulfan	increases expression	EXP		6480464	Endosulfan results in increased expression of RAB7B mRNA	CTD	PMID:29391264
Rab7b	Rat	fenvalerate	increases expression	EXP		6480464	fenvalerate results in increased expression of RAB7B mRNA	CTD	PMID:30307764
Rab7b	Rat	FR900359	increases phosphorylation	ISO	RAB7B (Homo sapiens)	6480464	FR900359 results in increased phosphorylation of RAB7B protein	CTD	PMID:37730182
Rab7b	Rat	fumonisin B1	multiple interactions	ISO	Rab7b (Mus musculus)	6480464	[NR1H2 protein affects the susceptibility to fumonisin B1] which affects the expression of RAB7B mRNA and [NR1H3 protein affects the susceptibility to fumonisin B1] which affects the expression of RAB7B mRNA	CTD	PMID:30448865
Rab7b	Rat	genistein	decreases expression	ISO	Rab7b (Mus musculus)	6480464	Genistein results in decreased expression of RAB7B mRNA	CTD	PMID:32186404
Rab7b	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of RAB7B mRNA	CTD	PMID:33387578
Rab7b	Rat	hydroquinone	decreases expression	ISO	RAB7B (Homo sapiens)	6480464	hydroquinone results in decreased expression of RAB7B mRNA	CTD	PMID:31256213
Rab7b	Rat	indometacin	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in increased expression of RAB7B mRNA	CTD	PMID:28628672
Rab7b	Rat	lead diacetate	increases expression	EXP		6480464	lead acetate results in increased expression of RAB7B mRNA	CTD	PMID:22641619
Rab7b	Rat	lidocaine	increases expression	EXP		6480464	Lidocaine results in increased expression of RAB7B mRNA	CTD	PMID:35283115
Rab7b	Rat	lipopolysaccharide	decreases expression	ISO	Rab7b (Mus musculus)	6480464	Lipopolysaccharides results in decreased expression of RAB7B mRNA	CTD	PMID:26582142
Rab7b	Rat	MeIQx	increases expression	ISO	RAB7B (Homo sapiens)	6480464	2-amino-3 more ...	CTD	PMID:20816883
Rab7b	Rat	niclosamide	increases expression	ISO	RAB7B (Homo sapiens)	6480464	Niclosamide results in increased expression of RAB7B mRNA	CTD	PMID:36318118
Rab7b	Rat	panobinostat	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of RAB7B mRNA	CTD	PMID:27188386
Rab7b	Rat	panobinostat	increases expression	ISO	RAB7B (Homo sapiens)	6480464	panobinostat results in increased expression of RAB7B mRNA	CTD	PMID:26272509
Rab7b	Rat	paracetamol	decreases expression	EXP		6480464	Acetaminophen results in decreased expression of RAB7B mRNA	CTD	PMID:33387578
Rab7b	Rat	paraquat	increases expression	EXP		6480464	Paraquat results in increased expression of RAB7B mRNA	CTD	PMID:32680482
Rab7b	Rat	pentanal	increases expression	ISO	RAB7B (Homo sapiens)	6480464	pentanal results in increased expression of RAB7B mRNA	CTD	PMID:26079696
Rab7b	Rat	perfluorooctane-1-sulfonic acid	multiple interactions	ISO	Rab7b (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of RAB7B mRNA	CTD	PMID:36331819
Rab7b	Rat	propanal	increases expression	ISO	RAB7B (Homo sapiens)	6480464	propionaldehyde results in increased expression of RAB7B mRNA	CTD	PMID:26079696
Rab7b	Rat	SB 431542	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Rab7b	Rat	silicon dioxide	decreases expression	ISO	RAB7B (Homo sapiens)	6480464	Silicon Dioxide analog results in decreased expression of RAB7B mRNA	CTD	PMID:25895662
Rab7b	Rat	silicon dioxide	increases expression	EXP		6480464	Silicon Dioxide results in increased expression of RAB7B mRNA	CTD	PMID:22431001
Rab7b	Rat	sodium arsenite	increases expression	ISO	RAB7B (Homo sapiens)	6480464	sodium arsenite results in increased expression of RAB7B mRNA	CTD	PMID:28595984 more ...
Rab7b	Rat	sodium arsenite	decreases expression	ISO	RAB7B (Homo sapiens)	6480464	sodium arsenite results in decreased expression of RAB7B mRNA	CTD	PMID:38568856
Rab7b	Rat	sodium dodecyl sulfate	decreases expression	ISO	RAB7B (Homo sapiens)	6480464	Sodium Dodecyl Sulfate results in decreased expression of RAB7B mRNA	CTD	PMID:31734321
Rab7b	Rat	Soman	increases expression	EXP		6480464	Soman results in increased expression of RAB7B mRNA	CTD	PMID:19281266
Rab7b	Rat	sotorasib	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[sotorasib co-treated with trametinib co-treated with NVP-BKM120] results in decreased expression of RAB7B mRNA	CTD	PMID:36139627
Rab7b	Rat	temozolomide	decreases expression	ISO	RAB7B (Homo sapiens)	6480464	Temozolomide results in decreased expression of RAB7B mRNA	CTD	PMID:31758290
Rab7b	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of RAB7B mRNA	CTD	PMID:34492290
Rab7b	Rat	thiram	decreases expression	ISO	RAB7B (Homo sapiens)	6480464	Thiram results in decreased expression of RAB7B mRNA	CTD	PMID:38568856
Rab7b	Rat	titanium dioxide	increases expression	EXP		6480464	titanium dioxide results in increased expression of RAB7B mRNA	CTD	PMID:30012374
Rab7b	Rat	trametinib	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[sotorasib co-treated with trametinib co-treated with NVP-BKM120] results in decreased expression of RAB7B mRNA	CTD	PMID:36139627
Rab7b	Rat	trichostatin A	increases expression	ISO	RAB7B (Homo sapiens)	6480464	trichostatin A results in increased expression of RAB7B mRNA	CTD	PMID:24935251
Rab7b	Rat	triptonide	decreases expression	ISO	Rab7b (Mus musculus)	6480464	triptonide results in decreased expression of RAB7B mRNA	CTD	PMID:33045310
Rab7b	Rat	trovafloxacin	increases expression	ISO	Rab7b (Mus musculus)	6480464	trovafloxacin results in increased expression of RAB7B mRNA	CTD	PMID:35537566
Rab7b	Rat	valproic acid	increases expression	ISO	RAB7B (Homo sapiens)	6480464	Valproic Acid results in increased expression of RAB7B mRNA	CTD	PMID:28001369
Rab7b	Rat	vinclozolin	decreases methylation	EXP		6480464	vinclozolin results in decreased methylation of RAB7B gene	CTD	PMID:31682807
Rab7b	Rat	vorinostat	increases expression	ISO	RAB7B (Homo sapiens)	6480464	vorinostat results in increased expression of RAB7B mRNA	CTD	PMID:26272509
Rab7b	Rat	vorinostat	multiple interactions	ISO	RAB7B (Homo sapiens)	6480464	[NOG protein co-treated with Vorinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of RAB7B mRNA	CTD	PMID:27188386

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab7b	Rat	cellular response to type II interferon	acts_upstream_of_or_within	IEA	UniProtKB:Q8VEA8 and ensembl:ENSMUSP00000065456	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	cellular response to type II interferon	acts_upstream_of_or_within	ISO	Rab7b (Mus musculus)	1624291	PMID:19144319	RGD	PMID:19144319
Rab7b	Rat	endosome to lysosome transport	involved_in	IBA	FB:FBgn0015795 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab7b	Rat	late endosome to Golgi transport	involved_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:20375062	RGD	PMID:20375062
Rab7b	Rat	late endosome to Golgi transport	involved_in	IEA	UniProtKB:Q96AH8 and ensembl:ENSP00000482499	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	negative regulation of toll-like receptor 4 signaling pathway	involved_in	ISO	Rab7b (Mus musculus)	1624291	PMID:17395780	RGD	PMID:17395780
Rab7b	Rat	negative regulation of toll-like receptor 4 signaling pathway	involved_in	IEA	UniProtKB:Q8VEA8 and ensembl:ENSMUSP00000065456	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	negative regulation of toll-like receptor 9 signaling pathway	involved_in	ISO	Rab7b (Mus musculus)	1624291	PMID:19587007	RGD	PMID:19587007
Rab7b	Rat	negative regulation of toll-like receptor 9 signaling pathway	involved_in	IEA	UniProtKB:Q8VEA8 and ensembl:ENSMUSP00000065456	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	phagosome-lysosome fusion	involved_in	IBA	PANTHER:PTN000635769 and UniProtKB:P51149	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab7b	Rat	positive regulation of interleukin-6 production	involved_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:20953574	RGD	PMID:20953574
Rab7b	Rat	positive regulation of interleukin-6 production	involved_in	IEA	UniProtKB:Q96AH8 and ensembl:ENSP00000482499	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	positive regulation of megakaryocyte differentiation	involved_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:20953574	RGD	PMID:20953574
Rab7b	Rat	positive regulation of megakaryocyte differentiation	involved_in	IEA	UniProtKB:Q96AH8 and ensembl:ENSP00000482499	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	positive regulation of NF-kappaB transcription factor activity	involved_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:20953574	RGD	PMID:20953574

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab7b	Rat	Golgi apparatus	located_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:20375062	RGD	PMID:20375062
Rab7b	Rat	Golgi apparatus	located_in	IEA	UniProtKB:Q96AH8 and ensembl:ENSP00000482499	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	late endosome	located_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:20375062	RGD	PMID:20375062
Rab7b	Rat	late endosome	located_in	IEA	UniProtKB:Q8VEA8 and ensembl:ENSMUSP00000065456	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	late endosome	located_in	IEA	UniProtKB:Q96AH8 and ensembl:ENSP00000482499	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	late endosome	located_in	ISO	Rab7b (Mus musculus)	1624291	PMID:17395780 and PMID:19587007	RGD	PMID:17395780 and PMID:19587007
Rab7b	Rat	late endosome	is_active_in	IBA	FB:FBgn0015795 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab7b	Rat	lysosome	located_in	ISO	Rab7b (Mus musculus)	1624291	PMID:17395780 and PMID:19587007	RGD	PMID:17395780 and PMID:19587007
Rab7b	Rat	lysosome	located_in	IEA	UniProtKB:Q96AH8 and ensembl:ENSP00000482499	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	lysosome	is_active_in	IBA	MGI:105068 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab7b	Rat	lysosome	located_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:20375062	RGD	PMID:20375062
Rab7b	Rat	lysosome	located_in	IEA	UniProtKB:Q8VEA8 and ensembl:ENSMUSP00000065456	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	phagocytic vesicle	located_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:21255211	RGD	PMID:21255211
Rab7b	Rat	phagocytic vesicle	located_in	IEA	UniProtKB:Q96AH8 and ensembl:ENSP00000482499	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	phagocytic vesicle	located_in	IEA	UniProtKB:Q8VEA8 and ensembl:ENSMUSP00000065456	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab7b	Rat	phagocytic vesicle	is_active_in	IBA	MGI:2442295 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab7b	Rat	phagocytic vesicle	located_in	ISO	Rab7b (Mus musculus)	1624291	PMID:19144319	RGD	PMID:19144319
Rab7b	Rat	trans-Golgi network	located_in	ISO	RAB7B (Homo sapiens)	1624291	PMID:20375062	RGD	PMID:20375062
Rab7b	Rat	trans-Golgi network	located_in	IEA	UniProtKB:Q96AH8 and ensembl:ENSP00000482499	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab7b	Rat	GTP binding	enables	IEA	UniProtKB-KW:KW-0342	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Rab7b	Rat	GTP binding	enables	IEA	InterPro:IPR001806	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Rab7b	Rat	GTP binding	enables	IEA	InterPro:IPR001806 and InterPro:IPR005225	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Rab7b	Rat	GTPase activity	enables	IEA	InterPro:IPR001806	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Rab7b	Rat	nucleotide binding	enables	IEA	UniProtKB-KW:KW-0547	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Rab7b	Rat	protein binding	enables	ISO	RAB7B (Homo sapiens)	1624291	UniProtKB:Q92624 and PMID:32296183	RGD	PMID:32296183

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab7b	Rat	Entamoebiasis pathway		IEA		6907045		KEGG	rno:05146
Rab7b	Rat	phagocytosis pathway		IEA		6907045		KEGG	rno:04145

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:17395780	PMID:19144319	PMID:19587007	PMID:20375062	PMID:20953574	PMID:21255211	PMID:30911939

Rab7b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	45,673,396 - 45,699,798 (+)	NCBI		GRCr8
mRatBN7.2	13	43,121,168 - 43,147,581 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	43,121,226 - 43,147,581 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	45,724,566 - 45,751,219 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	47,012,704 - 47,039,362 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	44,277,285 - 44,303,944 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	48,456,143 - 48,483,714 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	48,455,923 - 48,482,138 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	53,528,328 - 53,554,460 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	44,620,063 - 44,636,864 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	13	43,459,652 - 43,485,905 (+)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

RAB7B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	205,976,740 - 206,003,395 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	205,976,740 - 206,003,461 (-)	Ensembl	GRCh38		hg38	GRCh38
Celera	1	179,083,656 - 179,111,173 (-)	NCBI		Celera
Cytogenetic Map	1	q32.1	NCBI
T2T-CHM13v2.0	1	205,240,788 - 205,267,388 (-)	NCBI		T2T-CHM13v2.0

Rab7b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	131,616,412 - 131,646,288 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	131,616,433 - 131,643,177 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	131,688,681 - 131,715,443 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	131,688,695 - 131,715,439 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	133,585,272 - 133,610,041 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	133,516,271 - 133,540,610 (+)	NCBI		MGSCv36	mm8
Celera	1	134,288,561 - 134,315,745 (+)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	57.18	NCBI

Rab7b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	41,615,302 - 41,638,151 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	41,615,302 - 41,638,157 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAB7B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	43,366,553 - 43,393,623 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	43,332,079 - 43,359,104 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	181,584,814 - 181,611,831 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	185,868,040 - 185,894,691 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	185,867,145 - 185,894,691 (-)	Ensembl	panpan1.1		panPan2

RAB7B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	2,333,939 - 2,359,531 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	2,335,535 - 2,359,469 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	2,426,274 - 2,452,097 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	2,331,177 - 2,356,692 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	2,331,172 - 2,356,652 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	2,324,856 - 2,350,846 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	2,716,580 - 2,742,361 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	2,917,536 - 2,943,551 (-)	NCBI		UU_Cfam_GSD_1.0

Rab7b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	69,264,259 - 69,283,993 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936557	6,504,509 - 6,519,219 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936557	6,504,562 - 6,519,219 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAB7B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	66,635,638 - 66,666,036 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	66,635,636 - 66,666,034 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	72,916,252 - 72,946,414 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAB7B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	23,341,090 - 23,367,414 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	23,341,490 - 23,367,398 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	24,038,503 - 24,064,596 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rab7b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	5,307,440 - 5,334,945 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624807	5,307,361 - 5,334,578 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Rab7b
174 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	49
Count of miRNA genes:	47
Interacting mature miRNAs:	48
Transcripts:	ENSRNOT00000009280
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10755495	Bp387	Blood pressure QTL 387	3.78		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	34663461	87525369	Rat
9589141	Insul28	Insulin level QTL 28	10.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	13	9313465	54313465	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	37374509	82374509	Rat
61391	Bp5	Blood pressure QTL 5	5.6		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	22301875	67301875	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	37415584	80753406	Rat
1300163	Cardf1	Cardiac cell morphology QTL 1	4.18		aorta morphology trait (VT:0000272)	artery lesion measurement (CMO:0000975)	13	11929449	45417941	Rat
2317040	Aia21	Adjuvant induced arthritis QTL 21	2.75		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	9831541	54831541	Rat
631645	Bp121	Blood pressure QTL 121	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	14915655	59915655	Rat
2317046	Aia8	Adjuvant induced arthritis QTL 8	3.9700000286102295		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	9831541	54831541	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	39754544	84754544	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	8897350	101631289	Rat
61339	Bp24	Blood pressure QTL 24		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	5994668	44807491	Rat
70170	Eae14	Experimental allergic encephalomyelitis QTL 14		0.0024	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	23203448	68203448	Rat
2303032	Bp328	Blood pressure QTL 328			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	41184022	45417941	Rat
1331784	Bp222	Blood pressure QTL 222	2.944		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	17694436	53050594	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	34535218	79535218	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	5994833	77046787	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	38433408	83433408	Rat
2302275	Gluco37	Glucose level QTL 37	3.8		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	13	11929449	46193066	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	20605871	101339738	Rat
1558644	Cm45	Cardiac mass QTL 45	3.6	0.002	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	13	23692969	68692969	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	31241331	93395974	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	37374509	82374509	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	32284471	77284471	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	30395351	101056920	Rat
2301962	Cm72	Cardiac mass QTL 72	4.12		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	13	31241331	58363171	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	5994833	77046787	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	37262092	82262092	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	37415584	82415584	Rat
6893338	Cm76	Cardiac mass QTL 76	0	0.99	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	23692969	68692969	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	101056920	Rat
9589164	Gluco66	Glucose level QTL 66	6.67	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	13	15158722	60158722	Rat
7411662	Foco29	Food consumption QTL 29	20.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	13	9313465	54313465	Rat

BF390192

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	43,147,351 - 43,147,506 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	48,482,119 - 48,482,273	NCBI	Rnor6.0
Rnor_5.0	13	53,554,231 - 53,554,385	UniSTS	Rnor5.0
RGSC_v3.4	13	44,637,946 - 44,638,100	UniSTS	RGSC3.4
Celera	13	43,485,676 - 43,485,830	UniSTS
RH 3.4 Map	13	112.3	UniSTS
Cytogenetic Map	13	q13	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001109328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FM076322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009280 ⟹ ENSRNOP00000009280

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	43,121,226 - 43,147,581 (+)	Ensembl
Rnor_6.0 Ensembl	13	48,455,923 - 48,482,138 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103032 ⟹ ENSRNOP00000094821

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	43,121,226 - 43,144,754 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109645 ⟹ ENSRNOP00000088975

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	43,121,226 - 43,147,580 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113839 ⟹ ENSRNOP00000081874

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	43,121,226 - 43,145,787 (+)	Ensembl

RefSeq Acc Id:

NM_001109328 ⟹ NP_001102798

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	45,673,445 - 45,699,798 (+)	NCBI
mRatBN7.2	13	43,121,226 - 43,147,581 (+)	NCBI
Rnor_6.0	13	48,456,216 - 48,482,348 (+)	NCBI
Rnor_5.0	13	53,528,328 - 53,554,460 (+)	NCBI
RGSC_v3.4	13	44,620,063 - 44,636,864 (+)	RGD
Celera	13	43,459,652 - 43,485,905 (+)	NCBI

Sequence:

show sequence

GTGGCCTCTCACCAAAACCGTTTACGTTCTCAATACTGGCCAGATTGAAACTGCCACTCAGGGAAGAGAGGCCCAGACCCAGAACTCCCACCTGTGTGAGGCCCTCATGAATCCCCGAAAGAAAGTGG
ACTTGAAACTTATCATTGTTGGTGCACTTGGTGTGGGAAAGACCTCTCTCCTTCATCAATATGTACACAAGACATTTTTTGAGGAATACCAGACCACACTGGGGGCCAGCATCCTCTCCAAAATTATC
ATACTGGATGACACAACTTTGAAGCTGCAGATCTGGGACACAGGTGGTCAAGAGCGGTTCCGCTCAATGGTATCAACATTCTACAAAGGTTCCGATGGCTGTATCCTGGCATTTGATGTTACTGATCC
AGAGTCCTTTGAAGCCCTGGATATCTGGAGGGATGATGTCCTGGCAAAGATCGTCCCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGCAACAAAATCGATCTGGAAGATAGGAAGGTGCCCCAGG
AGGTGGCCCATGAATGGTGTAAAGAGAAGGACATGCCATACTTTGAAGTTAGTGCGAAGAATGACATCAATGTGGTGCAGGCCTTTGAGGTTCTGGCCAGCCGGGCTCTGTTGAGGTACCAAGGCATT
GCCGAGAATCACCTTGCAGACTCCATCAAGCTCTCTCCGGGCCAACCAAGGAGCAAATGCTGCTGATCCTGGACCCCCTCCTTCCAGACTCCTGATGCTCAATCCCTCAAGCCCGTAGTCAGCGAGGA
GACTGAGCCACTGCAGCAGGAGAGACTGTCACAAGGCAAACCCTGGCTCCAGAGAAATCATGGGAGTCTTGATGACTCAAGCTTTTCTTTCTCCTCTCCTCCAACACAATCCTGCGAGTCTCTGGAGA
CAAGCCTCTCCCTTGAGCACTGAGGAGCTTTGGATGGAAATGCACCTCTGACTCCCTCAGCAGCCAGGACACGGACCGCTCCTGACAGGCAGAAGCCTACAGGCCTGAGACTTCCCACGGCTTCTTCC
AAAGAGAGCTGAGGGAGCAAGATAAAACCAGTTGTTCCTGCTTCCTGGGTGTTCAAACGGCTTCCATAACTGACCAGGCCTCAGTGTGCCCTCTGCCAAATGAGAGCTCCCCAGGTTCCCCATATCCC
AATGTGAGTTGAGGACCATAAACTCCATTTAAATCTCACTCACTGGTGTGGCCACACACGTTTACTCCTTCGGCAAGCATTTTGTTGCCTTCTACGTATGGTGCGTTGATGTCTGGAAACACACAAAA
CAGGCAGGAGTCCTGGCCTCCCAGAGGCACACCTGGAGACAGAGGGACAGACAGCAGGCCACCAGCAGGACAGAGGACAGCAATGAGGTGCTATTTTAAACAAAGGGGCCAAGCAGGCTTCCCTGTGA
TGTGACAGTTGGGCTGACAGTTACAGTGCAAGCTACAGGAGTCAGGAGAGGGAGCAGCAAGGCCAAGGCCCTGAGGCATTAGACAGCTACTTTCCATGTGAAAGCTCTTTCCCTGAGGACTCAAAGCT
GCTGCCAGTGATATCCTGTTCCCAGAAGGTGCCTTGAGCATTTGATGACTGGCCACTAGGGGGCAGAAGTGTCCTCTACTTCCAGGCCAGGGAGTTCTGGGGATACTTGAAAAGCTGGTGTTTCTGTC
AAGAAAATGGCTGAAACATGTCCCCAGGCTGTAGGAATGTCAGACCTGGGCTAGTTGGGTAAAAAAAACAAACAAACAAAAAAACAAAACAAAACAAAAAACCTTCAGGATACTTGATTCAGGGAACA
AATCAAAATCAGTAACAGATCCCAGAGCAAGCTACGTAGAGAGATATGGATTCTGTGTCCTGTACATTTCAAAGCTAGAACCTGGTTTTTTTTTTTCTTCTGGCTTCACACAGCACAGATAGGTTGGC
CCATTCTAAAAATGGTAGACGGGATGAACTCTCAAGATCTACAATGGTCAGGTTCATACCTCATGCCTACCAGACATTCCTGTCTCCACAGAAGTCTTCTTTTCTGAGTTCCGAGCAGATCAGAGGTA
TTCATCTCTAGGAAGCAACTGACCCCAAAGATTTCACTGAGAGGCAGGTAGTCAGGGGGCACCAAGCGGAGGTCCTGGGGTCCCTGTCTGTCCCCACCTAGCTCTGAAGGATAAAGCAACTCCCCATG
GGCAGTGGTCACAGGAACAGTGAGCCCTGTGTCCCTCAGAGATGAATGATTTGTCCCTGTCATACACAGGTGTGGCTCTCCTGGAAGTCAGACGGTGGAGGGATGTGTGGTATGGGGAAGGGGGGAGG
GGGGAGAGTTCAGCACCACAATGAACACAAGAACCATATTTAAAGTTACACAACAAATAGTGTTTCCTGTTTTTAATCCTTTGTGGGACAATAGTCCCCCTTGGTCTGTGATGCCAGTCTCAGTTACC
CGTGGGTCAACTGTGGACCAAAAATATTAAGTAGCAAATCCCAGAAATAAATAACTTATAACTTTCAA

hide sequence

RefSeq Acc Id:

XM_008769491 ⟹ XP_008767713

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	45,675,070 - 45,699,798 (+)	NCBI
mRatBN7.2	13	43,122,867 - 43,146,844 (+)	NCBI
Rnor_6.0	13	48,457,132 - 48,477,912 (+)	NCBI

Sequence:

show sequence

GTGTGTATGTGTGTGTGTTGTGTTATGTTTTCTGTGAATGAAAGGCATGCATACTTACCACGGCATATTTGTGGAGATCGGAGGATAGCTCCGTTGAGTTGATTTTCTCCTTCTACCCTTACATGGGT
TCTGGCAAGTACCTTTCCTTGCTGAGCCATCTCGCTGGCCTACCAAGTAGTTTCGACTGCAGAATCTCTGGACTTATAATGGCATTTTATAAAATGCAAGCATTCTATAATTGGTAGGCATTGCTTAT
TGATAAAAAGAATTGTTCTGGGCTTATCGATCAGTCCCCCACTACAAAGATCTTATGCAGATAGTAGTTTGTGAGTATCCTTAGACATACTGTGCTTCTGCATAGCAGGTGTGCACTACATGGGTGTC
TAGATACCTGGATGGGCGAATGAATATCCATTCATACATGCATAGAGAGGACACATGGATGGATATGTCACTCTTCAGAAAAGCTTCTGTATCTGCAGCATCAGTCACCATGCTTTGGGGACAGGTGT
ACAGAGAGATAAGAGGTGCTGTCTAGGGTACGGGTAGTCTACTTGGGGAAGCAGGAAAAACATCTCCCCAAAGAGCTTAAAGAATGAGAACCGGGAGCTCTGAGAGCAGCGTTGTGGGTGTGCTTTGT
GGAGGAAGCAGGTTTAGACCTGCAAGGATGGCTGGGTGATGCAGACTGTCACGTGACAACTGGCAGGCAACAAAGCCTCCTGTGCCCCGAGAACACATCAAACAGAAAGCCTTATGCTCAGCCTGTGA
GTTCACTGTTAGAATGAATAAAGTTCGGGGTGCAAAGGGGAGACGAGAAACCGTGGAGCAAGACTAGAAGCAGAGGAAAGACCGGACAGAGAAACTGGGACTGCTGCAAAACTCTCAGCTGCCCCTGT
TCACTGGTCTCCCTGGCAACTTGCGTAGGACCTCATCCAGGACAAGCCCTCATGAATCCCCGAAAGAAAGTGGACTTGAAACTTATCATTGTTGGTGCACTTGGTGTGGGAAAGACCTCTCTCCTTCA
TCAATATGTACACAAGACATTTTTTGAGGAATACCAGACCACACTGGGGGCCAGCATCCTCTCCAAAATTATCATACTGGATGACACAACTTTGAAGCTGCAGATCTGGGACACAGGTGGTCAAGAGC
GGTTCCGCTCAATGGTATCAACATTCTACAAAGGTTCCGATGGCTGTATCCTGGCATTTGATGTTACTGATCCAGAGTCCTTTGAAGCCCTGGATATCTGGAGGGATGATGTCCTGGCAAAGATCGTC
CCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGCAACAAAATCGATCTGGAAGATAGGAAGGTGCCCCAGGAGGTGGCCCATGAATGGTGTAAAGAGAAGGACATGCCATACTTTGAAGTTAGTGC
GAAGAATGACATCAATGTGGTGCAGGCCTTTGAGGTTCTGGCCAGCCGGGCTCTGTTGAGGGTGAGTGATGCAGTAGTGGAACCAGTCAGAACTGCCCTAGGCGGGATCCTCAGGATCTTCCAAAGGA
GAAAATGCGGGCGTAGATAAGGGCATGGAGAGGATAGGAGTTCTCATTGTCTTCATTATTCGGTAGTTGAATGGGCTTAGCAATTCTGGTGCCACAGAAGCCAGAGGTGTAAGTACCTGGGAGTAAGC
GCTTAGTTGGTTTTGCAGTCTGGCCAGCTACCACAGTCCCTTGTTACTGATTGATGCTGGTCGTAGGTGCTGCAGTAGAGAGAGGCGCTCACCAAGATGCTAAGCCTTCATTTTTCTGAAGGAGCAGA
AGGGTACAGCCTCTTGAAGAAGGCTGTCACCCAGCCAGCTCACTCCAGTTACTTTATTCAAATATTATACAAGGTTAATTGGGGCTGGGAAAGGTTCCAACTATCAACGTTGCCTTGCCCTTGCTGCC
TGTGTGAGCAGACAACCCACATGGATCTCGGTCCCTTTTGACCATAGCTGGCCATAATCAAAAGTAAGAACTCCAGGTTTGCCAGCAGTGTCTTAGGATCAAGATTAGTGCATCTGTAAGCACCAAGT
GCAGACCTTGTAGACAGAGAACATTTTTTCAAGGGTCAAATAGTCTCATAACAACTTCTCAGCCTCTACTGATTGGCCCAAACATAGCAAAGGCTTGGCTGAAACATTTCACTCAAAGCCAGACACAA
ATGTCTTACTATACACATCACTCCATCTTCCCGCATTTTTTGTTTTAAGCAGATCTGCAAGGGATAACAATTATTGTTGGAGAATGATGGAGTTACACAGTAAACGTGGCCTTTGTCTATCTAGTTGT
CTATCATTCTATGCAAATAAATACACTTCAAAGCCAATAAAGTTGTCACCACAAAGAGAATTATAAAAATCACGAGAGCAAGAAACTTAGCAAAATGATTCATGGGATGAAATGAAGTTACACCATCC
ACAAGACATACTATGATGTTCGTCCCTGCTCTAGTAGGCAGCTTCTTTGAAAAATGCTTCTACGGTTTCTTGCTGCAAATCCTAGATCATTTGAGAAGAATTAGGACGACCTAACAAATGCATTTTAA
CCTTCTCCCAGTCATACTTGCTGTCATTGACCCTTTCAATGTCACTTGATCCCTTAATAGTTCTAATTGACCTCCAGTGAGTATTTCAGCTCGTCTCAATACTCCTCTGTCATCAACTGTTTCCCTGT
CTATCTTGTTATCGAGTCCAAAGTTCATAAGAATGCATACACCAGTCTTTAACAACTTCAGCAGTTCGAACTGCTTTATGAGGGGAACTCTAGCTGTGACAGCTAATGCGACGATTCCTAGGACCTCG
GTGATTATCCTTCCACCATCCTCTGAGTCCTTAATATTCTTTCAGCAAGCTTCCACACGAGTGTCACCACAGGTGAGTCTTGCCATGGTCTTGACGGTCTCACTGGCTTGCTGGTCTTGCTCTGAGAA
TATATTCACCTTCAAACGCAAAGACATACTAGCGTCGACACAGTTATGAAGGGTACAGCATGTGCATGTGAGGCTATAATCATTAGGGTACTTTTATAATCATTAAGGTCTTTTCAGTAACACCTTGT
GGAGTGTCTAAGAGCTTCCGTCCTGTGCCTCACACTGGAGATTCTAATTCAGTGGAGATTTCAGAAGTGATCTCTAGGCCAGTCCTCACGGCGGGATAGAAGTCTCTTGGGACCAAGCATTCATTTAG
TCGAGTGGAATCCACAGCCTATAGGAGTTGCTGACAGCCTCTCATCAGACAGATGAATAGATCCAGGTGCTTCAATATGATGGCTTTAAAAGCTTGTGTAGAGCGCAGCATGTGTGCCCAACATTGTC
CAGGCAGCAAAGGTAACCACCGTCAGAGCAGTGATTTGAAATGGAGAAAACGAACAAGGGTGCTTAAGAGACTAGAGGCATCCTGTAGGTGGAAATGGGTGCCCTCACCGTGGGTGACCTACTGACTT
GCATGACCCATGCTGTCCTGAAGAGAATGCCTCAAGACCCTGTCGGTAAAGACAGGCAGCCTTTGCCTCCAGCAGCTGCACAGGGGATAAGTTAAGAGCTTTCTCAGTTCGCGTGGCCCAGCCTGGAC
CTCAGGTCAGCCTTCAGCCCTCACTGCTTCCTGTGAAGGAACAGCAGAGAGTAGCAAGGGCTGTAAGCATGGCTTTGCCACACAGTCAGGAACGCTGGCTCCTAACATGCAGGTGAGCCTGCCTGTAC
CATTAGCCAAGACAGCTTATCACAACTTACCAGGATTGTGTGGTACAATTATGGCTAAACAGTCGGTTGCATGGAATCTTCCACAGCCCACTGCCAGTGTGTATATGTGGTTATCATACGTCCCTCCC
AATTTGGGAGTTAAAGCACAACCTTCCTACTGTTACATTTTAATCACGTGAGGCCATTAGCAGGTGGCAATTGTCTGCTTGTTCCTGTTAAAATCCTTTCTCTGCAAATAAAAGGAGCTTGGTGACCT
CATCACAGTTCCTGATCCTCGTACAGGAAACTGAACTGAGGTCCGGACGTCACAGGCACGGTGGCTGCAGACAGATGGATCTCGATAAAGTCCTGTCCTGGTAGCTTCAGATGCATACCTGTCAAAAC
ATTCGACTGATCCGTGCCTCAGTTTCCCTACCTATAAAATGAAAACAATCCCATCCCATAAACACATCCTGAGCTGCCATGAGAGGGCTCATGATAGGGTCTCATTGCAGTCAGGCTCAGGGGTGTGG
AAGTCAAGCCTTAGCTCTTCCTCCCTGCCCCATGATCCCAAGAATAAGACTCAGACTCAAAATATATTTACAGATACCTTGGCCATACCGAGGCTCTTCTCTGACTAGATATAACTTAACGTTTCCGA
TTTATTCTAGCCTACATTCTGCCTCATGTGCTCAGGTTCCACCCGTCCATCTCTTCACATCTTCCCAGCGAATCTTCCGCCTGGCTCTATCCCAGAATCCTTTTTGCTTCCCGGATTTCCCACCTCTA
TTTCCTGCTTAAGCCATAGGCCATCGGCTTTTTAATTGACAGGTGTTGCATCCACACAACACACAAGATATTCTCTCTCCACAGGAATGTGACACCTGAGGGCAACAGAGTGAAGCCGGAGACTGTAG
TGAAGGTGGGGTGACTCGGAGGCAGCTGGAGGCAAGGGGAACAAGGCGGCCATGTTTCAGAGGCAGCGTGTTTAGAAAGTGTTTGCAGGTAGATTCGGCAGGTCTTTGGAGATGTGGGGAAGAAGGAA
AGAAGGGCAGAGATCCGTGGCCCGGGCTTCAATTCATTGGGGCTCGTGCAAGAAGTCAACTATGAGTTTAGTTTACGAGAGAAGAAGATGCGGTGTTGAAGAGGATGAGGTCAGAGGACAATAGGGGT
GGTAAAGCCAGCAAGGCTTCTGAGGCTATGGCGGGTCACAGGAGGTGAGACTCAACACTGAAGAGCCAGGGCTTCCAGCAGGTGGCGCTGGGGTGTCCATCGTGCTCAGGTGCCCAGGACACTGGTGC
CCAATAGGGCACATCTTTCAGCAGTGTATATGCACTTAGAATTAGAAATTTCCCACCAACATGTTATAGGATGGAATGTAAAATCCACATGGATTTTAATAAACATCTTTACATGTTTGCAAACATAT
TTTGACATTCCCTCCAACGATCTGGCCCTTCTTTTTATTTCTTCTTCTTCTTCTTCTTC

hide sequence

RefSeq Acc Id:

XM_008769492 ⟹ XP_008767714

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	45,681,370 - 45,699,798 (+)	NCBI
mRatBN7.2	13	43,129,138 - 43,146,844 (+)	NCBI
Rnor_6.0	13	48,461,549 - 48,477,912 (+)	NCBI

Sequence:

show sequence

CACACACACACACACACACACACCTTGTGTCGGTAAGGACGGAGGCCTTGTTCAAGTTAGGCCA
GCACTGCAGTAGGACTGAGCGATCACCCATTGGGATAACTGTTCTCTGAGCCCTGTTTGCACTCACCTCAGAGCTATGGTGAGAGCAGTGTGCTGCACATAGTGTGGTGCAACCCACACAGGCGCTCA
ACTGCTGCTGTCTCATCTTCTGCCTCCATTTGGAAACTCTAAGGCCTTCTAAGACGTTGTGGGGGGTCTTTTAAGTTAAATTGACACACTGTACCAAAGTGTTTGGAAACAGTGTTTTGTTGCTCTGG
GGTTGGGGGAGGCTTCCAAAGAGATAACTGACGCCCCTTTCAGAGACTTCTCAGCCACTTCTTGATTGCTTGCCTTTGTGAGCAGCAACATTGTTGCAGTATATCAGCCCAGGTTAGTATCTTTAGTT
CCCGGCCTCCACATCCCTGGGAGATGGAGAATTTTTGCTAAGTACCTAGAATAATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGACGGAATGTAATAGTCATA
GTCGACCTCAATCTCGCTTCCTCTCCTGAAGCAAATCAATCACCCTTTGCATTCTCTCTCCCCAGAATTTTATTTCATTCTCTCCTAAGAAATATCACCACACCACATGCCTCACTTCTTCAGGCCCG
CCATGTTGTCAGCATCATTTTCTAGTGTTACTCAGTCCCTGTTCCTTTTTTCCTGGTGTTTCCTAGGGAAAGTCCTTTGCTTTTCATCTTAGATGATCTCAGTGCCAAGTCCAGCGCTTTCTCATATT
CTATTCACAGGAAATGGGTGCATTTGTTTATGTTCAGCAGTACATACATTAATTAATTGGATTTAGCTATTTTACAATGTATACATTTTTTATTTCATGGGATCTGTACATATGGTGCCCGGCCAGCA
ATCACAAAGCCCCCAACGTTGAAAAATAATAGTGCAATTGTGATATTAGTTGATGCTTAGATGATCTTGCACATGTAATTTAGCAACAACTTTTCACTCAGATCATAGAGCATGAACATTTCCCCCCC
ACATATAATAAAATGCCCAAATACTCTGCTCCATTGACTAGTAAGAGATTCATCATCCATCGTGTGTCCTCGCCTAAGTACCTCATCACTGCTGGGTATTAATAAGCAATACTGGAATGACAGTCTTA
AAAATAAAAGTCTTTGCTCTGCACAACAGTGCAGGTATGAGGAAACCATGGTGAGGTCCTGGCTCTGGCTGCCACCAAGGGGCATGTCTGGGTCCATGGCCCTGCTGCAGCTGGAGTCTGTGTTGATG
TCTGTGGCCCAAGTTGCCATCAAAGTCCAAGGGGTGTCGATGGTCTGGGCTGTCACAAGAGACCATCTTTGGGCCATGCTGTTGTGGGGAGGGGCATGCTAATCTGAGTCACCTGCACTGCCACCTGA
GGCCATGGGACATCTGGGGCCAGGCCTCTGGCAGGTGCCATGTCTCAGTCCATGGTCCTACAGTAGCCAGGCTCTGTGTTGATGTCCCATGCCATGCAGATGTCTCTGGTCTAGACTACTGCCTGAGG
CACCATGCTGAGCTGGCCTCGCTCCTCACCTAGGCAGCACAGCAGAGCTGATCCTGACATCAGGGGAGCTGGTTACCAACCTCAAAGTCATGAGAGTGGAAGAGCTGGGTCCACGCCTGGCTTCAGTA
CTCAGGAGAGCAGGCCTTGCACCTTACTTGAGCAGTACTGTAGCGCTGACTCTGGTCAAAGGTGTGCAGGTGAGCTACACCAAGAGCATGAGCATGGGAAAGCTGACCCTGCCCCACAGTGACTCTGG
TATTGGGTGAACTAGTTGGAACAGGACTGGAAAGCTTGTCCTAGTGGTTCTGGCACAGAAGAGTTGGCAGGCTGACCAACTTAGCTACCTTTCAGGTCCAGATCAAGGGCTTTGAGTTTGGCCAACCC
CAAAATCTGCCCCATGATCTGCTGGAGCATGTGAGAGGGCCAGTCCTGCAGATCCAAAGCTGCAGGATCTCCATGAGACAGGGCAACTACAGGATATCCGAGAGGAGTCCATGTGAGGATCAAATATA
GACAGCACAGCAGAAACCAGAGGCCTCGGAATAGACCAAGGACTCACTGCAATGAATATTTGCAAGTAAAAATGTGTGGACAAATGGGTATACCGTGGGACACACAGTAACATACCGCATCTTCCTTG
ACACCATTTTCTTTTTTATTCCATCCCATTTTCCTTTTCTTTTGCAGGGTAGGTTGCAAGGACGGAGGGTGGATACAAAGGGATGGGGGAGATGAATGGAATTGGGGTGCATGGTGTAAAATTCACGA
AGACTCAATAAAATGGTGGAAAGGGAAAAAGAAGTATTTGCTCAAGTTTCTGGTGATTTCTGTAGAAAAATCGCTAGAAGTAGAGGTCAGAGCTATTTTGAGGCTCGCCACACAGACTGCCAAGTAGC
TTTCCAGTAATGTGTACCAATTCCATCCCCTTCCAGCTGCAGCAAAGAGCCTATGGTTGGCAAGTGCCGCACGCTTTGGCTGGGGGAGGGGTTCTTGTCCATCCAAAGCCTCCAGGCAGTCGTGACAA
TGAATCCCTTGTCCTGCCCAGCCCATCCCCTCTCCCGACGCTGGCCTCCATTCCTGGTTCTAGGCTGTGTTGTGTGAGGTCTCTGTTCAGATCTGTCCTGTCCTTTGGTACTCTGGGCTACCTCCCGG
AGCAGGACTGGAAGAACTGAAGGGCCCTCATGAATCCCCGAAAGAAAGTGGACTTGAAACTTATCATTGTTGGTGCACTTGGTGTGGGAAAGACCTCTCTCCTTCATCAATATGTACACAAGACATTT
TTTGAGGAATACCAGACCACACTGGGGGCCAGCATCCTCTCCAAAATTATCATACTGGATGACACAACTTTGAAGCTGCAGATCTGGGACACAGGTGGTCAAGAGCGGTTCCGCTCAATGGTATCAAC
ATTCTACAAAGGTTCCGATGGCTGTATCCTGGCATTTGATGTTACTGATCCAGAGTCCTTTGAAGCCCTGGATATCTGGAGGGATGATGTCCTGGCAAAGATCGTCCCTATGGAGCAGTCATATCCCA
TGGTGGTGCTGGGCAACAAAATCGATCTGGAAGATAGGAAGGTGCCCCAGGAGGTGGCCCATGAATGGTGTAAAGAGAAGGACATGCCATACTTTGAAGTTAGTGCGAAGAATGACATCAATGTGGTG
CAGGCCTTTGAGGTTCTGGCCAGCCGGGCTCTGTTGAGGGTGAGTGATGCAGTAGTGGAACCAGTCAGAACTGCCCTAGGCGGGATCCTCAGGATCTTCCAAAGGAGAAAATGCGGGCGTAGATAAGG
GCATGGAGAGGATAGGAGTTCTCATTGTCTTCATTATTCGGTAGTTGAATGGGCTTAGCAATTCTGGTGCCACAGAAGCCAGAGGTGTAAGTACCTGGGAGTAAGCGCTTAGTTGGTTTTGCAGTCTG
GCCAGCTACCACAGTCCCTTGTTACTGATTGATGCTGGTCGTAGGTGCTGCAGTAGAGAGAGGCGCTCACCAAGATGCTAAGCCTTCATTTTTCTGAAGGAGCAGAAGGGTACAGCCTCTTGAAGAAG
GCTGTCACCCAGCCAGCTCACTCCAGTTACTTTATTCAAATATTATACAAGGTTAATTGGGGCTGGGAAAGGTTCCAACTATCAACGTTGCCTTGCCCTTGCTGCCTGTGTGAGCAGACAACCCACAT
GGATCTCGGTCCCTTTTGACCATAGCTGGCCATAATCAAAAGTAAGAACTCCAGGTTTGCCAGCAGTGTCTTAGGATCAAGATTAGTGCATCTGTAAGCACCAAGTGCAGACCTTGTAGACAGAGAAC
ATTTTTTCAAGGGTCAAATAGTCTCATAACAACTTCTCAGCCTCTACTGATTGGCCCAAACATAGCAAAGGCTTGGCTGAAACATTTCACTCAAAGCCAGACACAAATGTCTTACTATACACATCACT
CCATCTTCCCGCATTTTTTGTTTTAAGCAGATCTGCAAGGGATAACAATTATTGTTGGAGAATGATGGAGTTACACAGTAAACGTGGCCTTTGTCTATCTAGTTGTCTATCATTCTATGCAAATAAAT
ACACTTCAAAGCCAATAAAGTTGTCACCACAAAGAGAATTATAAAAATCACGAGAGCAAGAAACTTAGCAAAATGATTCATGGGATGAAATGAAGTTACACCATCCACAAGACATACTATGATGTTCG
TCCCTGCTCTAGTAGGCAGCTTCTTTGAAAAATGCTTCTACGGTTTCTTGCTGCAAATCCTAGATCATTTGAGAAGAATTAGGACGACCTAACAAATGCATTTTAACCTTCTCCCAGTCATACTTGCT
GTCATTGACCCTTTCAATGTCACTTGATCCCTTAATAGTTCTAATTGACCTCCAGTGAGTATTTCAGCTCGTCTCAATACTCCTCTGTCATCAACTGTTTCCCTGTCTATCTTGTTATCGAGTCCAAA
GTTCATAAGAATGCATACACCAGTCTTTAACAACTTCAGCAGTTCGAACTGCTTTATGAGGGGAACTCTAGCTGTGACAGCTAATGCGACGATTCCTAGGACCTCGGTGATTATCCTTCCACCATCCT
CTGAGTCCTTAATATTCTTTCAGCAAGCTTCCACACGAGTGTCACCACAGGTGAGTCTTGCCATGGTCTTGACGGTCTCACTGGCTTGCTGGTCTTGCTCTGAGAATATATTCACCTTCAAACGCAAA
GACATACTAGCGTCGACACAGTTATGAAGGGTACAGCATGTGCATGTGAGGCTATAATCATTAGGGTACTTTTATAATCATTAAGGTCTTTTCAGTAACACCTTGTGGAGTGTCTAAGAGCTTCCGTC
CTGTGCCTCACACTGGAGATTCTAATTCAGTGGAGATTTCAGAAGTGATCTCTAGGCCAGTCCTCACGGCGGGATAGAAGTCTCTTGGGACCAAGCATTCATTTAGTCGAGTGGAATCCACAGCCTAT
AGGAGTTGCTGACAGCCTCTCATCAGACAGATGAATAGATCCAGGTGCTTCAATATGATGGCTTTAAAAGCTTGTGTAGAGCGCAGCATGTGTGCCCAACATTGTCCAGGCAGCAAAGGTAACCACCG
TCAGAGCAGTGATTTGAAATGGAGAAAACGAACAAGGGTGCTTAAGAGACTAGAGGCATCCTGTAGGTGGAAATGGGTGCCCTCACCGTGGGTGACCTACTGACTTGCATGACCCATGCTGTCCTGAA
GAGAATGCCTCAAGACCCTGTCGGTAAAGACAGGCAGCCTTTGCCTCCAGCAGCTGCACAGGGGATAAGTTAAGAGCTTTCTCAGTTCGCGTGGCCCAGCCTGGACCTCAGGTCAGCCTTCAGCCCTC
ACTGCTTCCTGTGAAGGAACAGCAGAGAGTAGCAAGGGCTGTAAGCATGGCTTTGCCACACAGTCAGGAACGCTGGCTCCTAACATGCAGGTGAGCCTGCCTGTACCATTAGCCAAGACAGCTTATCA
CAACTTACCAGGATTGTGTGGTACAATTATGGCTAAACAGTCGGTTGCATGGAATCTTCCACAGCCCACTGCCAGTGTGTATATGTGGTTATCATACGTCCCTCCCAATTTGGGAGTTAAAGCACAAC
CTTCCTACTGTTACATTTTAATCACGTGAGGCCATTAGCAGGTGGCAATTGTCTGCTTGTTCCTGTTAAAATCCTTTCTCTGCAAATAAAAGGAGCTTGGTGACCTCATCACAGTTCCTGATCCTCGT
ACAGGAAACTGAACTGAGGTCCGGACGTCACAGGCACGGTGGCTGCAGACAGATGGATCTCGATAAAGTCCTGTCCTGGTAGCTTCAGATGCATACCTGTCAAAACATTCGACTGATCCGTGCCTCAG
TTTCCCTACCTATAAAATGAAAACAATCCCATCCCATAAACACATCCTGAGCTGCCATGAGAGGGCTCATGATAGGGTCTCATTGCAGTCAGGCTCAGGGGTGTGGAAGTCAAGCCTTAGCTCTTCCT
CCCTGCCCCATGATCCCAAGAATAAGACTCAGACTCAAAATATATTTACAGATACCTTGGCCATACCGAGGCTCTTCTCTGACTAGATATAACTTAACGTTTCCGATTTATTCTAGCCTACATTCTGC
CTCATGTGCTCAGGTTCCACCCGTCCATCTCTTCACATCTTCCCAGCGAATCTTCCGCCTGGCTCTATCCCAGAATCCTTTTTGCTTCCCGGATTTCCCACCTCTATTTCCTGCTTAAGCCATAGGCC
ATCGGCTTTTTAATTGACAGGTGTTGCATCCACACAACACACAAGATATTCTCTCTCCACAGGAATGTGACACCTGAGGGCAACAGAGTGAAGCCGGAGACTGTAGTGAAGGTGGGGTGACTCGGAGG
CAGCTGGAGGCAAGGGGAACAAGGCGGCCATGTTTCAGAGGCAGCGTGTTTAGAAAGTGTTTGCAGGTAGATTCGGCAGGTCTTTGGAGATGTGGGGAAGAAGGAAAGAAGGGCAGAGATCCGTGGCC
CGGGCTTCAATTCATTGGGGCTCGTGCAAGAAGTCAACTATGAGTTTAGTTTACGAGAGAAGAAGATGCGGTGTTGAAGAGGATGAGGTCAGAGGACAATAGGGGTGGTAAAGCCAGCAAGGCTTCTG
AGGCTATGGCGGGTCACAGGAGGTGAGACTCAACACTGAAGAGCCAGGGCTTCCAGCAGGTGGCGCTGGGGTGTCCATCGTGCTCAGGTGCCCAGGACACTGGTGCCCAATAGGGCACATCTTTCAGC
AGTGTATATGCACTTAGAATTAGAAATTTCCCACCAACATGTTATAGGATGGAATGTAAAATCCACATGGATTTTAATAAACATCTTTACATGTTTGCAAACATATTTTGACATTCCCTCCAACGATC
TGGCCCTTCTTTTTATTTCTTCTTCTTCTTCTTCTTC

hide sequence

RefSeq Acc Id:

XM_017598905 ⟹ XP_017454394

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	45,673,396 - 45,699,798 (+)	NCBI
mRatBN7.2	13	43,121,168 - 43,146,844 (+)	NCBI
Rnor_6.0	13	48,456,145 - 48,483,714 (+)	NCBI

Sequence:

show sequence

CCCTGGCCCAGCCTCTTTTGCAACTTTCCCAAGTCTGTGCACAGAAACAGAGGAGGAAAACTCA
GAGGGAAGTGGCCTCTCACCAAAACCGTTTACGTTCTCAATACTGGCCAGATTGAAACTGCCACTCAGGGAAGAGAGGCCCAGACCCAGAACTCCCACCTGTGTGAGGCCCTCATGAATCCCCGAAAG
AAAGTGGACTTGAAACTTATCATTGTTGGTGCACTTGGTGTGGGAAAGACCTCTCTCCTTCATCAATATGTACACAAGACATTTTTTGAGGAATACCAGACCACACTGGGGGCCAGCATCCTCTCCAA
AATTATCATACTGGATGACACAACTTTGAAGCTGCAGATCTGGGACACAGGTGGTCAAGAGCGGTTCCGCTCAATGGTATCAACATTCTACAAAGGTTCCGATGGCTGTATCCTGGCATTTGATGTTA
CTGATCCAGAGTCCTTTGAAGCCCTGGATATCTGGAGGGATGATGTCCTGGCAAAGATCGTCCCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGCAACAAAATCGATCTGGAAGATAGGAAGTAC
CAAGGCATTGCCGAGAATCACCTTGCAGACTCCATCAAGCTCTCTCCGGGCCAACCAAGGAGCAAATGCTGCTGATCCTGGACCCCCTCCTTCCAGACTCCTGATGCTCAATCCCTCAAGCCCGTAGT
CAGCGAGGAGACTGAGCCACTGCAGCAGGAGAGACTGTCACAAGGCAAACCCTGGCTCCAGAGAAATCATGGGAGTCTTGATGACTCAAGCTTTTCTTTCTCCTCTCCTCCAACACAATCCTGCGAGT
CTCTGGAGACAAGCCTCTCCCTTGAGCACTGAGGAGCTTTGGATGGAAATGCACCTCTGACTCCCTCAGCAGCCAGGACACGGACCGCTCCTGACAGGCAGAAGCCTACAGGCCTGAGACTTCCCACG
GCTTCTTCCAAAGAGAGCTGAGGGAGCAAGATAAAACCAGTTGTTCCTGCTTCCTGGGTGTTCAAACGGCTTCCATAACTGACCAGGCCTCAGTGTGCCCTCTGCCAAATGAGAGCTCCCCAGGTTCC
CCATATCCCAATGTGAGTTGAGGACCATAAACTCCATTTAAATCTCACTCACTGGTGTGGCCACACACGTTTACTCCTTCGGCAAGCATTTTGTTGCCTTCTACGTATGGTGCGTTGATGTCTGGAAA
CACACAAAACAGGCAGGAGTCCTGGCCTCCCAGAGGCACACCTGGAGACAGAGGGACAGACAGCAGGCCACCAGCAGGACAGAGGACAGCAATGAGGTGCTATTTTAAACAAAGGGGCCAAGCAGGCT
TCCCTGTGATGTGACAGTTGGGCTGACAGTTACAGTGCAAGCTACAGGAGTCAGGAGAGGGAGCAGCAAGGCCAAGGCCCTGAGGCATTAGACAGCTACTTTCCATGTGAAAGCTCTTTCCCTGAGGA
CTCAAAGCTGCTGCCAGTGATATCCTGTTCCCAGAAGGTGCCTTGAGCATTTGATGACTGGCCACTAGGGGGCAGAAGTGTCCTCTACTTCCAGGCCAGGGAGTTCTGGGGATACTTGAAAAGCTGGT
GTTTCTGTCAAGAAAATGGCTGAAACATGTCCCCAGGCTGTAGGAATGTCAGACCTGGGCTAGTTGGGTAAAAAAAACAAACAAACAAAAAAACAAAACAAAACAAAAAACCTTCAGGATACTTGATT
CAGGGAACAAATCAAAATCAGTAACAGATCCCAGAGCAAGCTACGTAGAGAGATATGGATTCTGTGTCCTGTACATTTCAAAGCTAGAACCTGGTTTTTTTTTTTCTTCTGGCTTCACACAGCACAGA
TAGGTTGGCCCATTCTAAAAATGGTAGACGGGATGAACTCTCAAGATCTACAATGGTCAGGTTCATACCTCATGCCTACCAGACATTCCTGTCTCCACAGAAGTCTTCTTTTCTGAGTTCCGAGCAGA
TCAGAGGTATTCATCTCTAGGAAGCAACTGACCCCAAAGATTTCACTGAGAGGCAGGTAGTCAGGGGGCACCAAGCGGAGGTCCTGGGGTCCCTGTCTGTCCCCACCTAGCTCTGAAGGATAAAGCAA
CTCCCCATGGGCAGTGGTCACAGGAACAGTGAGCCCTGTGTCCCTCAGAGATGAATGATTTGTCCCTGTCATACACAGGTGTGGCTCTCCTGGAAGTCAGACGGTGGAGGGATGTGTGGTATGGGGAA
GGGGGGAGGGGGGAGAGTTCAGCACCACAATGAACACAAGAACCATATTTAAAGTTACACAACAAATAGTGTTTCCTGTTTTTAATCCTTTGTGGGACAATAGTCCCCCTTGGTCTGTGATGCCAGTC
TCAGTTACCCGTGGGTCAACTGTGGACCAAAAATATTAAGTAGCAAATCCCAGAAATAAATAACTTATAACTTTCAACGTGTGTGTCACTTGAAGTAGTGTGGTGAGCTCCTAAGCCATCCTACCAGG
CCAGTCACTCCTCCCCCTCTATGCGGGGCATCTAACCCGGCAGTTACTTTGTAGCCGTCTCAGATGTATCAACCGCCATCATTCCAAATGCCTCTATTAATAGCAACCTAAAGTTATGCCACAGTGCC
CTTGTCACTATCTCATTGCCCAGATATGCCATCAGCCCATGTTGTCACAAGAGGATAAGGCTGAGAACAGTACAGTAGTTTTGAAATATGCATTTATACCCTTTTATTGCTTGTACAGACTCATAGTC
ATCTATCATCATATTACTGTCCATCTCGTGCTGTACCTAATTTATTCACAGAACTTGGTCATAGGCTTGTGGATAGGAGGTAGCATAGCACCTGGGAGGGGATTAGTACTATGTGACTTCAGGCATCA
ACTGGGGGAGGGGGATGTCCAGGAGTGTTTCCTTGGATAAGGAGAGACTGAGGTGCTTGCATTTTAATTTAACAAAACGTATCAGCATATTCTGACATGTCAACAGTGTCGCAGGTAATAAAAGCTGC
ATCATTTCCAGGACCATGTAATGAAATGAGATTGTTCGAAAATTAAGATTTCAAGACAGCAACAACAGCATCCGACATTAGAGGCGAGCCCTCCTGAGGACGCATCTCCTCACGAGGTGCTCTTGAGA
AAGCAATGAGCTCTCAGCTAGATGGAGCTCTGGCCTCGCCCTGCTGGACATGCTGCAGCTTGAAGGAAAGGCTCTGTACAGACTAAATATTCCAAATGGGAGCAGGGACCCGTGGGCCTGGAGACTCA
CAAATATCCTGTTATAACCGGGAGATGTGCTGGTCGATCCGCAGGGCTGAGTGAACTGAGTTGACAATAAGGGTCCCGGTCAGCCATTGCAGCCCGACTACGACCCTGAGTCGGACACTGGCCCATGC
CAGCAGGCACAGGAACTTCAGCCCACCATAGCAGCTCCCACTGGAGGCCCAAGTTGGGGGTGGTGGCATCATATCCTAAGCCCTCCTCATAGCCATCGTTTCAAGAAAAAGACCTGTGTCAACAGGAT
CTGTTGATCCTGCTCTCCACAGCCTGTTCAAGGGGAGCACCCTGGGCTGCTGCTCAAGGGTAAGAACTCAGCCCAGGACTCCTGTGGCAATGTATCCTTGAGGCCTGGGTAAAAATCAAAGCCAAATC
TTATCACCAAACAAACCAGGCTTGGACGCTAGGCCCTGCCCGCCCTCTATTTCCAGGGACTTGGGAAAATGCCCGTTTCTCCTGCTGTTTGCTCCCACACAACGGAGCCTTCCTACTGCGCCCAGTTG
GTGGGCCATCTATCCCTCAGCCTCGAACAGCTTCT

hide sequence

RefSeq Acc Id:

XM_063272554 ⟹ XP_063128624

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	45,675,053 - 45,699,798 (+)	NCBI


Protein RefSeqs	NP_001102798	(Get FASTA)	NCBI Sequence Viewer
	XP_008767713	(Get FASTA)	NCBI Sequence Viewer
	XP_008767714	(Get FASTA)	NCBI Sequence Viewer
	XP_017454394	(Get FASTA)	NCBI Sequence Viewer
	XP_063128624	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM09818	(Get FASTA)	NCBI Sequence Viewer
	EDM09819	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009280
	ENSRNOP00000009280.3
	ENSRNOP00000081874.1
	ENSRNOP00000088975
	ENSRNOP00000088975.1
	ENSRNOP00000094821.1

RefSeq Acc Id:	NP_001102798 ⟸ NM_001109328
- UniProtKB:	D4A7A8 (UniProtKB/TrEMBL), A6IC29 (UniProtKB/TrEMBL), A6IC28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPMEQSYPMVVLGNKIDL EDRKVPQEVAHEWCKEKDMPYFEVSAKNDINVVQAFEVLASRALLRYQGIAENHLADSIKLSPGQPRSKCC hide sequence

RefSeq Acc Id:	XP_008767713 ⟸ XM_008769491
- Peptide Label:	isoform X1
- UniProtKB:	D4A7A8 (UniProtKB/TrEMBL), A6IC29 (UniProtKB/TrEMBL), A6IC28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPMEQSYPMVVLGNKIDL EDRKVPQEVAHEWCKEKDMPYFEVSAKNDINVVQAFEVLASRALLRVSDAVVEPVRTALGGILRIFQRRKCGRR hide sequence

RefSeq Acc Id:	XP_008767714 ⟸ XM_008769492
- Peptide Label:	isoform X1
- UniProtKB:	D4A7A8 (UniProtKB/TrEMBL), A6IC29 (UniProtKB/TrEMBL), A6IC28 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPMEQSYPMVVLGNKIDL EDRKVPQEVAHEWCKEKDMPYFEVSAKNDINVVQAFEVLASRALLRVSDAVVEPVRTALGGILRIFQRRKCGRR hide sequence

RefSeq Acc Id:	XP_017454394 ⟸ XM_017598905
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A7M1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPMEQSYPMVVLGNKIDL EDRKYQGIAENHLADSIKLSPGQPRSKCC hide sequence

Ensembl Acc Id:

ENSRNOP00000009280 ⟸ ENSRNOT00000009280

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A7A8-F1-model_v2	AlphaFold	D4A7A8	1-199	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-18342	BioCyc
Ensembl Genes	ENSRNOG00000039754	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000009280	ENTREZGENE
	ENSRNOT00000009280.6	UniProtKB/TrEMBL
	ENSRNOT00000103032.1	UniProtKB/TrEMBL
	ENSRNOT00000109645	ENTREZGENE
	ENSRNOT00000109645.1	UniProtKB/TrEMBL
	ENSRNOT00000113839.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/TrEMBL
	Ras_GTPase	UniProtKB/TrEMBL
	Small_GTP-bd	UniProtKB/TrEMBL
KEGG Report	rno:501854	UniProtKB/TrEMBL
NCBI Gene	501854	ENTREZGENE
PANTHER	RAB FAMILY	UniProtKB/TrEMBL
	RAS-RELATED PROTEIN RAB-7B	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
PhenoGen	Rab7b	PhenoGen
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	ARF	UniProtKB/TrEMBL
	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000039754	RatGTEx
SMART	RAB	UniProtKB/TrEMBL
	RAN	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8I5ZVT9_RAT	UniProtKB/TrEMBL
	A0A8I6A7M1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ANP1_RAT	UniProtKB/TrEMBL
	A6IC28	ENTREZGENE, UniProtKB/TrEMBL
	A6IC29	ENTREZGENE, UniProtKB/TrEMBL
	D4A7A8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	RGD1562617	similar to RAB7-like protein	RGD1562617_predicted	similar to RAB7-like protein (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1562617_predicted	similar to RAB7-like protein (predicted)	LOC501854	similar to RAB7-like protein	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC501854	similar to RAB7-like protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)