Cryz (crystallin zeta) - Rat Genome Database

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Gene: Cryz (crystallin zeta) Rattus norvegicus
Analyze
Symbol: Cryz
Name: crystallin zeta
RGD ID: 1311639
Description: Enables mRNA 3'-UTR binding activity. Predicted to be involved in protein homotetramerization and xenobiotic catabolic process. Predicted to be located in mitochondrion. Predicted to be active in cytosol. Orthologous to human CRYZ (crystallin zeta); INTERACTS WITH (+)-schisandrin B; 2,2,2-tetramine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: crystallin, zeta; crystallin, zeta (quinone reductase); LOC362061; NADPH:quinone reductase; quinone oxidoreductase; zeta-crystallin
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82246,211,707 - 246,239,472 (+)NCBIGRCr8
mRatBN7.22243,552,037 - 243,580,369 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2243,552,119 - 243,579,758 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2251,382,444 - 251,410,059 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02249,276,271 - 249,303,886 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02244,175,870 - 244,204,081 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02260,884,315 - 260,911,827 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2260,884,337 - 260,911,792 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02279,545,988 - 279,573,507 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42252,433,559 - 252,461,038 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12252,448,165 - 252,475,644 (+)NCBI
Celera2235,475,252 - 235,504,548 (+)NCBICelera
Cytogenetic Map2q45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CryzRatautism spectrum disorder  ISOCRYZ (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:35663546

1 to 20 of 144 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CryzRat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of CRYZ mRNA]CTDPMID:31150632
CryzRat(1->4)-beta-D-glucan multiple interactionsISOCryz (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of CRYZ mRNACTDPMID:36331819
CryzRat1,2-dimethylhydrazine decreases expressionISOCryz (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of CRYZ mRNACTDPMID:22206623
CryzRat1,2-dimethylhydrazine multiple interactionsISOCryz (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of CRYZ mRNACTDPMID:22206623
CryzRat17beta-estradiol multiple interactionsISOCryz (Mus musculus)6480464[Polyphenols co-treated with Estradiol] results in increased expression of CRYZ mRNACTDPMID:30077407
CryzRat17beta-estradiol decreases expressionISOCryz (Mus musculus)6480464Estradiol results in decreased expression of CRYZ mRNACTDPMID:39298647
CryzRat2,2,2-tetramine multiple interactionsEXP 6480464Trientine inhibits the reaction [Streptozocin results in decreased expression of CRYZ protein]CTDPMID:19634143
CryzRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOCRYZ (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of CRYZ mRNACTDPMID:12377990
CryzRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of CRYZ mRNACTDPMID:33387578
CryzRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOCryz (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of CRYZ mRNACTDPMID:21570461
CryzRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of CRYZ mRNACTDPMID:21215274
CryzRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOCryz (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of CRYZ mRNACTDPMID:15297030
CryzRat2,3,7,8-tetrachlorodibenzodioxine increases activityISOCryz (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased activity of CRYZ proteinCTDPMID:15297030
CryzRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOCryz (Mus musculus)6480464AHR protein promotes the reaction [Tetrachlorodibenzodioxin results in increased activity of CRYZ protein] more ...CTDPMID:15297030
CryzRat2,4,6-tribromophenol decreases expressionISOCRYZ (Homo sapiens)64804642 more ...CTDPMID:31675489
CryzRat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of CRYZ mRNACTDPMID:21346803
CryzRat2,5-dihydroxybenzoic acid multiple interactionsISOCryz (Mus musculus)64804642 and 5-dihydroxybenzoic acid inhibits the reaction [Benzoyl Peroxide results in decreased activity of CRYZ protein]CTDPMID:15454305
CryzRat2,6-dimethoxyphenol multiple interactionsISOCRYZ (Homo sapiens)6480464[Furaldehyde co-treated with pyrogallol 1 and 3-dimethyl ether] results in increased expression of CRYZ proteinCTDPMID:38598786
CryzRat2-hydroxypropanoic acid increases expressionISOCRYZ (Homo sapiens)6480464Lactic Acid results in increased expression of CRYZ mRNACTDPMID:30851411
CryzRat2-methylcholine affects expressionISOCRYZ (Homo sapiens)6480464beta-methylcholine affects the expression of CRYZ mRNACTDPMID:21179406

1 to 20 of 144 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CryzRatbiological_process  ND 159840702/2009: no relevant rat dataRGD 
CryzRatprotein homotetramerization involved_inISOCRYZ (Homo sapiens)1624291UniProtKB:Q08257 and PMID:17497241RGDPMID:17497241
CryzRatxenobiotic catabolic process involved_inISSUniProtKB:Q082571600115GO_REF:0000024UniProtGO_REF:0000024
CryzRatxenobiotic catabolic process involved_inISOCRYZ (Homo sapiens)1624291 PMID:17497241RGDPMID:17497241

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CryzRatcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
CryzRatcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
CryzRatcytosol located_inISOCRYZ (Homo sapiens)1624291 PMID:17497241RGDPMID:17497241
CryzRatcytosol is_active_inIBAPANTHER:PTN001364171 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
CryzRatcytosol located_inISSUniProtKB:Q082571600115GO_REF:0000024UniProtGO_REF:0000024
CryzRatcytosol located_inISOCRYZ (Homo sapiens) more ...1624291 RGDGO_REF:0000052
CryzRatmitochondrion located_inISOCRYZ (Homo sapiens)9068941 PMID:34800366FlyBasePMID:34800366

Molecular Function
1 to 19 of 19 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CryzRatidentical protein binding enablesISOCRYZ (Homo sapiens)1624291UniProtKB:Q08257 and PMID:32296183RGDPMID:32296183
CryzRatmRNA 3'-UTR binding enablesISSUniProtKB:Q082571600115GO_REF:0000024UniProtGO_REF:0000024
CryzRatmRNA 3'-UTR binding  IDA 1601355 RGD 
CryzRatmRNA 3'-UTR binding enablesIBAPANTHER:PTN001364171 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
CryzRatmRNA 3'-UTR binding enablesISOCRYZ (Homo sapiens)1624291 PMID:17497241RGDPMID:17497241
CryzRatNADH binding NOT|enablesISSUniProtKB:Q082571600115GO_REF:0000024UniProtGO_REF:0000024
CryzRatNADH binding NOT|enablesISOCRYZ (Homo sapiens)1624291 PMID:17497241RGDPMID:17497241
CryzRatNADPH binding enablesISSUniProtKB:Q082571600115GO_REF:0000024UniProtGO_REF:0000024
CryzRatNADPH binding enablesIBAPANTHER:PTN001364171 and UniProtKB:Q082571600115GO_REF:0000033GO_CentralGO_REF:0000033
CryzRatNADPH binding enablesISOCRYZ (Homo sapiens)1624291 PMID:17497241RGDPMID:17497241
CryzRatNADPH:quinone reductase activity enablesISSUniProtKB:Q082571600115GO_REF:0000024UniProtGO_REF:0000024
CryzRatNADPH:quinone reductase activity enablesIEAEC:1.6.5.51600115GO_REF:0000003UniProtGO_REF:0000003
CryzRatNADPH:quinone reductase activity enablesIEARHEA:142691600115GO_REF:0000116RHEAGO_REF:0000116
CryzRatNADPH:quinone reductase activity enablesIBAPANTHER:PTN001364171 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
CryzRatNADPH:quinone reductase activity enablesISOCRYZ (Homo sapiens)1624291 PMID:17497241RGDPMID:17497241
CryzRatoxidoreductase activity enablesIEAInterPro:IPR002364 and InterPro:IPR0208431600115GO_REF:0000002InterProGO_REF:0000002
CryzRatoxidoreductase activity enablesIEAUniProtKB-KW:KW-05601600115GO_REF:0000043UniProtGO_REF:0000043
CryzRatRNA binding enablesIEAUniProtKB-KW:KW-06941600115GO_REF:0000043UniProtGO_REF:0000043
CryzRatzinc ion binding enablesIEAInterPro:IPR0023641600115GO_REF:0000002InterProGO_REF:0000002
1 to 19 of 19 rows


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive gene review and curation RGD comprehensive gene curation
6. pH-responsive stabilization of glutamate dehydrogenase mRNA in LLC-PK1-F+ cells. Schroeder JM, etal., Am J Physiol Renal Physiol. 2003 Aug;285(2):F258-65. Epub 2003 Apr 8.
PMID:12477932   PMID:15489334   PMID:17497241   PMID:19056867   PMID:20458337   PMID:23376485   PMID:23533145   PMID:34800366  



Cryz
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82246,211,707 - 246,239,472 (+)NCBIGRCr8
mRatBN7.22243,552,037 - 243,580,369 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2243,552,119 - 243,579,758 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2251,382,444 - 251,410,059 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02249,276,271 - 249,303,886 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02244,175,870 - 244,204,081 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02260,884,315 - 260,911,827 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2260,884,337 - 260,911,792 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02279,545,988 - 279,573,507 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42252,433,559 - 252,461,038 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12252,448,165 - 252,475,644 (+)NCBI
Celera2235,475,252 - 235,504,548 (+)NCBICelera
Cytogenetic Map2q45NCBI
CRYZ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38174,705,486 - 74,733,050 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl174,705,482 - 74,733,408 (-)EnsemblGRCh38hg38GRCh38
GRCh37175,171,170 - 75,198,734 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36174,943,772 - 74,971,315 (-)NCBINCBI36Build 36hg18NCBI36
Build 34174,883,204 - 74,910,748NCBI
Celera173,416,409 - 73,444,324 (-)NCBICelera
Cytogenetic Map1p31.1NCBI
HuRef173,305,573 - 73,333,498 (-)NCBIHuRef
CHM1_1175,286,617 - 75,314,534 (-)NCBICHM1_1
T2T-CHM13v2.0174,547,169 - 74,574,691 (-)NCBIT2T-CHM13v2.0
Cryz
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393154,302,348 - 154,328,819 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3154,302,348 - 154,328,819 (+)EnsemblGRCm39 Ensembl
GRCm383154,596,711 - 154,623,182 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3154,596,711 - 154,623,182 (+)EnsemblGRCm38mm10GRCm38
MGSCv373154,259,976 - 154,286,146 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363154,532,492 - 154,558,475 (+)NCBIMGSCv36mm8
Celera3161,056,174 - 161,081,722 (+)NCBICelera
Cytogenetic Map3H4NCBI
cM Map379.25NCBI
Cryz
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542317,955,222 - 17,975,982 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542317,952,783 - 17,975,982 (+)NCBIChiLan1.0ChiLan1.0
CRYZ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21152,146,290 - 152,174,077 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11151,306,974 - 151,335,349 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0173,933,432 - 73,962,107 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1175,908,684 - 75,936,131 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl175,908,684 - 75,936,127 (-)Ensemblpanpan1.1panPan2
CRYZ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1671,656,162 - 71,693,020 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl671,656,188 - 71,675,692 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha674,319,317 - 74,339,207 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0672,243,211 - 72,286,494 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl672,243,256 - 72,276,221 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1671,743,227 - 71,762,856 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0671,689,881 - 71,709,606 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0672,184,160 - 72,204,066 (+)NCBIUU_Cfam_GSD_1.0
Cryz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505886,491,899 - 86,523,098 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365712,001,273 - 2,024,974 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365712,002,388 - 2,033,423 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CRYZ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6138,435,392 - 138,460,975 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16138,434,960 - 138,461,042 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26128,301,994 - 128,327,414 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CRYZ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12058,427,281 - 58,456,370 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2058,435,671 - 58,456,408 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603358,998,854 - 59,027,683 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cryz
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474221,955,368 - 21,990,402 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474221,951,389 - 21,974,134 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Cryz
174 total Variants

Predicted Target Of
Summary Value
Count of predictions:108
Count of miRNA genes:84
Interacting mature miRNAs:100
Transcripts:ENSRNOT00000032808
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631563Hcuc3Hepatic copper content QTL 33.87liver copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)2229059610249053267Rat
1298075Scl17Serum cholesterol level QTL 173.4blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)2211744537249053267Rat
2293833Kiddil8Kidney dilation QTL 82.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2219753301247136170Rat
1598835Anxrr18Anxiety related response QTL 182.98body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)2200990457245990457Rat
1300126Bp175Blood pressure QTL 1753.46arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2214226044247136170Rat
7207490Bss111Bone structure and strength QTL 1116.4femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)2211744537249053267Rat
7207484Bss108Bone structure and strength QTL 1085.3femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)2211744537249053267Rat
7411555Bw132Body weight QTL 1320.001body mass (VT:0001259)body weight gain (CMO:0000420)2223389739249053267Rat
9587428Epfw6Epididymal fat weight QTL 67.470.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)2223389739249053267Rat
7207482Bss107Bone structure and strength QTL 1077femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)2211744537249053267Rat

1 to 10 of 16 rows
RH131206  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22243,579,419 - 243,579,616 (+)MAPPERmRatBN7.2
Rnor_6.02260,911,489 - 260,911,685NCBIRnor6.0
Rnor_5.02279,573,169 - 279,573,365UniSTSRnor5.0
RGSC_v3.42252,460,734 - 252,460,930UniSTSRGSC3.4
Celera2235,504,244 - 235,504,440UniSTS
RH 3.4 Map21630.2UniSTS
Cytogenetic Map2q45UniSTS
RH132950  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22243,578,997 - 243,579,189 (+)MAPPERmRatBN7.2
Rnor_6.02260,911,067 - 260,911,258NCBIRnor6.0
Rnor_5.02279,572,747 - 279,572,938UniSTSRnor5.0
RGSC_v3.42252,460,312 - 252,460,503UniSTSRGSC3.4
Celera2235,503,822 - 235,504,013UniSTS
RH 3.4 Map21637.8UniSTS
Cytogenetic Map2q45UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000032808   ⟹   ENSRNOP00000038188
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2243,552,119 - 243,579,758 (+)Ensembl
Rnor_6.0 Ensembl2260,884,337 - 260,911,792 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000117940   ⟹   ENSRNOP00000077429
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2243,557,442 - 243,579,758 (+)Ensembl
RefSeq Acc Id: NM_001012183   ⟹   NP_001012183
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82246,211,825 - 246,239,438 (+)NCBI
mRatBN7.22243,552,111 - 243,579,724 (+)NCBI
Rnor_6.02260,884,339 - 260,911,793 (+)NCBI
Rnor_5.02279,545,988 - 279,573,507 (+)NCBI
RGSC_v3.42252,433,559 - 252,461,038 (+)RGD
Celera2235,475,252 - 235,504,548 (+)RGD
Sequence:
RefSeq Acc Id: XM_006233520   ⟹   XP_006233582
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82246,211,707 - 246,239,472 (+)NCBI
mRatBN7.22243,552,038 - 243,580,369 (+)NCBI
Rnor_6.02260,884,315 - 260,911,827 (+)NCBI
Rnor_5.02279,545,988 - 279,573,507 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063282242   ⟹   XP_063138312
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82246,211,747 - 246,234,351 (+)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_001012183 (Get FASTA)   NCBI Sequence Viewer  
  XP_006233582 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138312 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH78927 (Get FASTA)   NCBI Sequence Viewer  
  EDL82539 (Get FASTA)   NCBI Sequence Viewer  
  EDL82540 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000038188.3
  ENSRNOP00000103156
GenBank Protein Q6AYT0 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_001012183   ⟸   NM_001012183
- UniProtKB: Q6AYT0 (UniProtKB/Swiss-Prot),   A6HWQ3 (UniProtKB/TrEMBL),   A0A8I5Y5T4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006233582   ⟸   XM_006233520
- Peptide Label: isoform X1
- UniProtKB: Q6AYT0 (UniProtKB/Swiss-Prot),   A6HWQ3 (UniProtKB/TrEMBL),   A0A8I5Y5T4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000038188   ⟸   ENSRNOT00000032808
Ensembl Acc Id: ENSRNOP00000077429   ⟸   ENSRNOT00000117940
RefSeq Acc Id: XP_063138312   ⟸   XM_063282242
- Peptide Label: isoform X2
Enoyl reductase (ER)

Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYT0-F1-model_v2 AlphaFold Q6AYT0 1-329 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13691833
Promoter ID:EPDNEW_R2357
Type:multiple initiation site
Name:Cryz_1
Description:crystallin zeta
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02260,884,347 - 260,884,407EPDNEW


1 to 31 of 31 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-50756 BioCyc
Ensembl Genes ENSRNOG00000028319 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000032808.4 UniProtKB/Swiss-Prot
  ENSRNOT00000124823 ENTREZGENE
Gene3D-CATH Medium-chain alcohol dehydrogenases, catalytic domain UniProtKB/Swiss-Prot
  NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7106704 IMAGE-MGC_LOAD
InterPro ADH_C UniProtKB/Swiss-Prot
  ADH_N UniProtKB/Swiss-Prot
  GroES-like_sf UniProtKB/Swiss-Prot
  NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot
  PKS_ER UniProtKB/Swiss-Prot
  Quin_OxRdtase/zeta-crystal_CS UniProtKB/Swiss-Prot
  Zinc-ADH_QOR/CCCR UniProtKB/Swiss-Prot
KEGG Report rno:362061 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93718 IMAGE-MGC_LOAD
NCBI Gene 362061 ENTREZGENE
PANTHER QUINONE OXIDOREDUCTASE UniProtKB/Swiss-Prot
  QUINONE OXIDOREDUCTASE UniProtKB/Swiss-Prot
Pfam ADH_N UniProtKB/Swiss-Prot
  ADH_zinc_N UniProtKB/Swiss-Prot
PharmGKB CRYZ RGD
PhenoGen Cryz PhenoGen
PROSITE QOR_ZETA_CRYSTAL UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000028319 RatGTEx
SMART PKS_ER UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50129 UniProtKB/Swiss-Prot
  SSF51735 UniProtKB/Swiss-Prot
UniProt A0A8I5Y5T4 ENTREZGENE, UniProtKB/TrEMBL
  A6HWQ3 ENTREZGENE, UniProtKB/TrEMBL
  Q6AYT0 ENTREZGENE, UniProtKB/Swiss-Prot
1 to 31 of 31 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-19 Cryz  crystallin zeta  Cryz  crystallin, zeta (quinone reductase)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-01-10 Cryz  crystallin, zeta (quinone reductase)  Cryz  crystallin, zeta  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Cryz  crystallin, zeta  Cryz_predicted  crystallin, zeta (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Cryz_predicted  crystallin, zeta (predicted)      Symbol and Name status set to approved 70820 APPROVED