Advanced Search (OLGA)

Gene: Phf21b (PHD finger protein 21B) Rattus norvegicus

Subscribe to Updates

Analyze

Symbol:

Phf21b

Name:

PHD finger protein 21B

RGD ID:

1308739

Description:

Orthologous to human PHF21B (PHD finger protein 21B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamiprid; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC300117; RGD1308739; similar to hypothetical protein BC012187

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PHF21B (PHD finger protein 21B)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Phf21b (PHD finger protein 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Phf21b (PHD finger protein 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PHF21B (PHD finger protein 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PHF21B (PHD finger protein 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Phf21b (PHD finger protein 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PHF21B (PHD finger protein 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PHF21B (PHD finger protein 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Phf21b (PHD finger protein 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	FOXA3 (forkhead box A3)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	PHF21B (PHD finger protein 21B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Phf21b (PHD finger protein 21B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	phf21b (PHD finger protein 21B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	phf21b	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	117,793,643 - 117,864,141 (-)	NCBI		GRCr8
mRatBN7.2	7	115,913,704 - 115,984,215 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	115,915,412 - 115,984,215 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	117,665,985 - 117,734,741 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	119,891,709 - 119,960,466 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	119,861,154 - 119,929,908 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	125,649,688 - 125,720,694 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	125,649,688 - 125,718,986 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	125,370,846 - 125,438,318 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	122,808,454 - 122,879,651 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	122,839,964 - 122,912,933 (-)	NCBI
Celera	7	112,213,870 - 112,282,352 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Phf21b	Rat	intellectual disability		ISO	RGD:1344183	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar
Phf21b	Rat	Phelan-McDermid syndrome		ISO	RGD:1344183	8554872	ClinVar Annotator: match by term: Phelan-McDermid syndrome	ClinVar

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Phf21b	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of PHF21B mRNA	CTD	PMID:33387578
Phf21b	Rat	4,4'-sulfonyldiphenol	decreases expression	ISO	RGD:1553053	6480464	bisphenol S results in decreased expression of PHF21B mRNA	CTD	PMID:30951980\|PMID:39298647
Phf21b	Rat	4,4'-sulfonyldiphenol	affects methylation	ISO	RGD:1553053	6480464	bisphenol S affects the methylation of PHF21B gene	CTD	PMID:31683443
Phf21b	Rat	4,4'-sulfonyldiphenol	increases methylation	ISO	RGD:1344183	6480464	bisphenol S results in increased methylation of PHF21B gene	CTD	PMID:31601247
Phf21b	Rat	4,4'-sulfonyldiphenol	decreases methylation	ISO	RGD:1553053	6480464	bisphenol S results in decreased methylation of PHF21B exon	CTD	PMID:33297965
Phf21b	Rat	acetamiprid	increases expression	EXP		6480464	acetamiprid results in increased expression of PHF21B mRNA	CTD	PMID:27782041
Phf21b	Rat	aflatoxin B1	increases methylation	ISO	RGD:1344183	6480464	Aflatoxin B1 results in increased methylation of PHF21B intron	CTD	PMID:30157460
Phf21b	Rat	Aflatoxin B2 alpha	affects methylation	ISO	RGD:1344183	6480464	aflatoxin B2 affects the methylation of PHF21B intron	CTD	PMID:30157460
Phf21b	Rat	benzo[a]pyrene	increases methylation	ISO	RGD:1344183	6480464	Benzo(a)pyrene results in increased methylation of PHF21B promoter	CTD	PMID:27901495
Phf21b	Rat	benzo[e]pyrene	decreases methylation	ISO	RGD:1344183	6480464	benzo(e)pyrene results in decreased methylation of PHF21B intron	CTD	PMID:30157460
Phf21b	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of PHF21B mRNA	CTD	PMID:25181051
Phf21b	Rat	bisphenol A	decreases expression	ISO	RGD:1553053	6480464	bisphenol A results in decreased expression of PHF21B mRNA	CTD	PMID:32156529\|PMID:38074096
Phf21b	Rat	bisphenol A	increases methylation	ISO	RGD:1344183	6480464	bisphenol A results in increased methylation of PHF21B gene	CTD	PMID:31601247
Phf21b	Rat	cisplatin	multiple interactions	ISO	RGD:1344183	6480464	[Cisplatin co-treated with jinfukang] results in decreased expression of PHF21B mRNA	CTD	PMID:27392435
Phf21b	Rat	cisplatin	decreases expression	ISO	RGD:1344183	6480464	Cisplatin results in decreased expression of PHF21B mRNA	CTD	PMID:27392435
Phf21b	Rat	dorsomorphin	multiple interactions	ISO	RGD:1344183	6480464	[NOG protein co-treated with methylmercuric chloride co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ...	CTD	PMID:27188386
Phf21b	Rat	endosulfan	increases expression	EXP		6480464	Endosulfan results in increased expression of PHF21B mRNA	CTD	PMID:29391264
Phf21b	Rat	fulvestrant	increases methylation	ISO	RGD:1344183	6480464	Fulvestrant results in increased methylation of PHF21B gene	CTD	PMID:31601247
Phf21b	Rat	furan	increases methylation	EXP		6480464	furan results in increased methylation of PHF21B gene	CTD	PMID:27387713
Phf21b	Rat	furan	decreases expression	EXP		6480464	furan results in decreased expression of PHF21B mRNA	CTD	PMID:27387713
Phf21b	Rat	lead(0)	affects expression	ISO	RGD:1344183	6480464	Lead affects the expression of PHF21B mRNA	CTD	PMID:28903495
Phf21b	Rat	methapyrilene	decreases methylation	ISO	RGD:1344183	6480464	Methapyrilene results in decreased methylation of PHF21B intron	CTD	PMID:30157460
Phf21b	Rat	methoxychlor	affects methylation	EXP		6480464	Methoxychlor affects the methylation of PHF21B gene	CTD	PMID:35440735
Phf21b	Rat	methylmercury chloride	increases expression	ISO	RGD:1344183	6480464	methylmercuric chloride results in increased expression of PHF21B mRNA	CTD	PMID:23179753\|PMID:26272509
Phf21b	Rat	methylmercury chloride	multiple interactions	ISO	RGD:1344183	6480464	[NOG protein co-treated with methylmercuric chloride co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ...	CTD	PMID:27188386
Phf21b	Rat	mono(2-ethylhexyl) phthalate	increases expression	EXP		6480464	mono-(2-ethylhexyl)phthalate results in increased expression of PHF21B mRNA	CTD	PMID:16809437
Phf21b	Rat	paracetamol	decreases expression	ISO	RGD:1344183	6480464	Acetaminophen results in decreased expression of PHF21B mRNA	CTD	PMID:22230336
Phf21b	Rat	paracetamol	increases expression	EXP		6480464	Acetaminophen results in increased expression of PHF21B mRNA	CTD	PMID:33387578
Phf21b	Rat	resveratrol	multiple interactions	ISO	RGD:1344183	6480464	[Plant Extracts co-treated with Resveratrol] results in decreased expression of PHF21B mRNA	CTD	PMID:23557933
Phf21b	Rat	SB 431542	multiple interactions	ISO	RGD:1344183	6480464	[NOG protein co-treated with methylmercuric chloride co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ...	CTD	PMID:27188386
Phf21b	Rat	silicon dioxide	increases expression	ISO	RGD:1344183	6480464	Silicon Dioxide analog results in increased expression of PHF21B mRNA	CTD	PMID:25895662
Phf21b	Rat	sodium arsenite	decreases expression	ISO	RGD:1344183	6480464	sodium arsenite results in decreased expression of PHF21B mRNA	CTD	PMID:29301061
Phf21b	Rat	sunitinib	increases expression	ISO	RGD:1344183	6480464	Sunitinib results in increased expression of PHF21B mRNA	CTD	PMID:31533062
Phf21b	Rat	tamoxifen	increases expression	ISO	RGD:1553053	6480464	Tamoxifen results in increased expression of PHF21B mRNA	CTD	PMID:25123088
Phf21b	Rat	titanium dioxide	increases methylation	ISO	RGD:1553053	6480464	titanium dioxide results in increased methylation of PHF21B gene	CTD	PMID:35295148
Phf21b	Rat	titanium dioxide	decreases methylation	ISO	RGD:1553053	6480464	titanium dioxide results in decreased methylation of PHF21B gene; titanium dioxide results in decreased methylation more ...	CTD	PMID:35295148
Phf21b	Rat	valproic acid	increases methylation	ISO	RGD:1344183	6480464	Valproic Acid results in increased methylation of PHF21B gene	CTD	PMID:29154799
Phf21b	Rat	valproic acid	affects expression	ISO	RGD:1344183	6480464	Valproic Acid affects the expression of PHF21B mRNA	CTD	PMID:25979313

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Phf21b	Rat	protein binding	enables	ISO	RGD:1344183\|UniProtKB:Q96EK2-3	1624291	UniProtKB:Q8N9N5-2\|UniProtKB:Q9P2K3-2 PMID:26871637	RGD	PMID:26871637
Phf21b	Rat	protein binding	enables	ISO	RGD:1344183	1624291	UniProtKB:Q12800 PMID:26871637	RGD	PMID:26871637

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:15632090

Phf21b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	117,793,643 - 117,864,141 (-)	NCBI		GRCr8
mRatBN7.2	7	115,913,704 - 115,984,215 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	115,915,412 - 115,984,215 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	117,665,985 - 117,734,741 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	119,891,709 - 119,960,466 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	119,861,154 - 119,929,908 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	125,649,688 - 125,720,694 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	125,649,688 - 125,718,986 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	125,370,846 - 125,438,318 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	122,808,454 - 122,879,651 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	122,839,964 - 122,912,933 (-)	NCBI
Celera	7	112,213,870 - 112,282,352 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

PHF21B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	44,881,162 - 45,010,005 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	44,881,162 - 45,010,005 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	45,277,042 - 45,405,886 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	43,655,706 - 43,784,245 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	43,597,578 - 43,726,118	NCBI
Celera	22	29,188,973 - 29,317,403 (-)	NCBI		Celera
Cytogenetic Map	22	q13.31	NCBI
HuRef	22	28,224,326 - 28,376,232 (-)	NCBI		HuRef
CHM1_1	22	45,235,760 - 45,364,535 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	45,364,687 - 45,493,893 (-)	NCBI		T2T-CHM13v2.0

Phf21b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	84,669,577 - 84,740,330 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	84,669,582 - 84,740,250 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	84,785,376 - 84,856,129 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	84,785,381 - 84,856,049 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	84,615,806 - 84,686,559 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	84,613,150 - 84,683,815 (-)	NCBI		MGSCv36	mm8
Celera	15	86,917,054 - 86,987,956 (-)	NCBI		Celera
Cytogenetic Map	15	E2	NCBI
cM Map	15	40.08	NCBI

Phf21b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	29,442,357 - 29,507,060 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	29,442,357 - 29,507,060 (-)	NCBI	ChiLan1.0	ChiLan1.0

PHF21B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	54,714,505 - 54,845,937 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	57,406,964 - 57,540,892 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	25,773,965 - 25,907,113 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	43,959,758 - 44,006,406 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	43,959,758 - 44,088,445 (-)	Ensembl	panpan1.1		panPan2

PHF21B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	21,042,151 - 21,068,180 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	20,986,924 - 21,066,392 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	20,915,777 - 20,998,844 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	21,722,328 - 21,805,422 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	21,721,607 - 21,806,414 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	21,442,069 - 21,525,097 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	21,762,329 - 21,845,707 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	21,936,652 - 22,019,622 (+)	NCBI		UU_Cfam_GSD_1.0

Phf21b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	4,759,457 - 4,767,422 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936718	2,212,741 - 2,240,530 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PHF21B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	4,291,396 - 4,386,247 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	4,290,962 - 4,387,112 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	1,661,338 - 1,697,485 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PHF21B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	27,353,586 - 27,501,080 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666045	97,845,948 - 97,977,833 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Phf21b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	4,544,003 - 4,605,501 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	4,543,998 - 4,605,501 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Phf21b
439 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	79
Count of miRNA genes:	70
Interacting mature miRNAs:	72
Transcripts:	ENSRNOT00000017906
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	43747012	135012528	Rat
1300112	Bp183	Blood pressure QTL 183	3.51		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	111182207	135012528	Rat
1331728	Bp214	Blood pressure QTL 214	2.825		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	80221299	124373579	Rat
1331731	Bp216	Blood pressure QTL 216	2.851		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	102297359	133492884	Rat
2298475	Eau6	Experimental allergic uveoretinitis QTL 6		0.0029	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	7	84257275	129257275	Rat
71114	Niddm14	Non-insulin dependent diabetes mellitus QTL 14	4.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	7	84257275	129257275	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	94811326	116294265	Rat
631687	Hcas1	Hepatocarcinoma susceptibility QTL 1	3.9	0.001	liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	7	91412594	129807172	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	103146217	116738842	Rat
1357339	Stl14	Serum triglyceride level QTL 14	3.45	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	112729683	133492707	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	73829340	130221005	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	44421311	118198041	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	83153392	128153392	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	64002457	135012528	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	90482196	135012528	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	81737938	126737938	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	96670164	135012528	Rat
7411607	Foco15	Food consumption QTL 15		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
2306821	Bp335	Blood pressure QTL 335		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	106571501	135012528	Rat
631663	Bw6	Body weight QTL 6	3.4		body mass (VT:0001259)	body weight (CMO:0000012)	7	111075573	134976056	Rat
1558655	Swd4	Spike wave discharge measurement QTL 4	3.68	0.0002	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge severity grade (CMO:0001988)	7	86983365	131983365	Rat
1331768	Kidm10	Kidney mass QTL 10	4.62096		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	80221299	125221299	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	41333674	119109060	Rat
2313102	Bmd79	Bone mineral density QTL 79	2.3	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	7	94811085	116738842	Rat
731174	Uae23	Urinary albumin excretion QTL 23	2.4	0.0042	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	7	104603555	135012528	Rat
1331748	Bp215	Blood pressure QTL 215	4.043		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	112308254	133492884	Rat
7411654	Foco25	Food consumption QTL 25	9.3	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
2299163	Iddm34	Insulin dependent diabetes mellitus QTL 34	2.71		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	7	91281130	135012528	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	69736226	117455174	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	10	49	113	91	90	59	25	59	6	217	97	93	45	60	31


RefSeq Transcripts	NM_001130680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000017906 ⟹ ENSRNOP00000017906

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	115,915,412 - 115,984,215 (-)	Ensembl
Rnor_6.0 Ensembl	7	125,649,688 - 125,718,986 (+)	Ensembl

RefSeq Acc Id:

NM_001130680 ⟹ NP_001124152

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	117,795,348 - 117,864,141 (-)	NCBI
mRatBN7.2	7	115,915,412 - 115,984,215 (-)	NCBI
Rnor_6.0	7	125,649,688 - 125,718,986 (+)	NCBI
Rnor_5.0	7	125,370,846 - 125,438,318 (+)	NCBI
RGSC_v3.4	7	122,808,454 - 122,879,651 (-)	RGD
Celera	7	112,213,870 - 112,282,352 (-)	RGD

Sequence:

show sequence

CTGCCGAATTAGCATCGTGCCGAGGCACAACTTTACCGCGGCCCCAGCGAGATCCAGGCGCGCGCGCCGGAGGAAATATAGTCCCTGCCGGCGGTCAGCTGGCGCGGGCGGCGCCAGGGCGCGCGCTG
GGGGGCTGCGCGGGGCTCCCGGCGCCGGGGGGCCATGCGCCGGGCGGCGCAGGCAGCCCGGGCACCCGGCGCAACTTAGCGGCAGCCGGAAGAGTTGGGCGCCAGCTCGCCTTTCTTCCCTCTCGTCA
GCCTCCTTTCCTATCGGCGCTGCAGGAGGGGACTCGTGTCTCTCAGTGCCCGGGACGCCGGATCCGAGTTCTCCCGGTCTGGTTCCCGCCGAGCCGCACAACTTCCTGCGAGCTCCGGCCAAAGTGAG
CTCAAAGTGCTGCCCAAGTTGCGGCGATGGAGCTGCAAAGCCGGTCCGAGGCGCTCGCAGTGGAACTCGCGCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCACGGATCGCA
GCGCTCAGCGACAAACAAGCTTTGGGATCCTCCACTGCAGTGCCTGTCACAGGTCCTCAGGTCAGCTCCCTGCAGAGGTTGGCCGGGCAAGGAGCAGCAGTGCTACCTCAGGTTAGGCCAAAGACTCT
GATTCCAGACAGCCTCCCTGTCACCCCGGGCAGGGACCGGCCACCCAAGCAACCCCCAACATTCCAAAAGGCCACTGTGGTCAGCATCAAGAACCCCAGCCCAGCCCTCCCCACTGCCAACAACACCG
TCAACCATGTGCCAACACCCAGCAGCCAGACCCAGGCCCTCACCGAGCCCACCGCCATCACCTCACCCCTGAGCAGTGCCGGGGTGGCCTATGCCATCATCTCCACCTCCCCCAGCAATGCTGCCACC
ATCACCCCCAGTACCACCGTGCCCGTGGCCAGCGACGGCATCAAAGTGCAGCCCCTCCTCATCAGTGCTGACAAAAAGGTCATCATCATTCAGCCCCAAGTGAAGACACAGCCAGAGAGTTCAGCAGA
GCCCGAGCCACCCACGGAGGAGCCATCTCAGGGAGCTCAGGACACCAAGGAAGATCAGCCCCCCAGCAAGGAGAATCCTGAGAAAATCGCCTTCATGGTAGCTCTAGGCCTGGTCACAACAGAACATC
TAGAAGAGATCCAGAGCAAGCGGCAGGAGAGGAAGAGGAGGAGCACGGCCAACCCTGCCTATAGCGGCTTCTTGGAGACCGAGAGGAAGCGACTGGCCTCCAGTTATCTCCACAACCCCTTGTTCCTC
ACAGCACGAGCCAATGAGGACCCCTGCTGGAAGGGTGAAATCACCCATGATGAATTCTGTGCTGCCTGCAAGCGAGGAGCCAGCCTGCAGCCCTGCGGCACCTGTTCAGGGGCCTACCACCTCAGCTG
CCTGGACCCGCCCCTTAAGACGGCACCCAAGGGCGTGTGGGTCTGCCCCAAGTGCCAGCGGAAGGCCTTAAAGAAAGACGAGGGTGTGCCCTGGACTGGAATGCTGGCCATTGTACACTCCTATGTCA
CCCACAAGACAGTGAAAGAAGAGGAGAAGCAGAAGCTGTTGCAGCGTGGCAGCGAACTGCAGTCTGAACACCAGCAGCTGGAGGAGCGGGACCGGCAGCTGGCCTCAGCTGTGAAGAAATGCTTGGAG
CTGAAGACAAGCCTGTTGGCCCGCCAACGGGGTACACAGTCATCGCTGGACCGCATCCGAGCCCTCCTCAGACTGATCCAGGGTGAGCAGATGCTTCAGGTCGCTGTGGCAACCACCAGCCCCACCCC
GCTTCTGGCGGGGGCCTGGACCAAGCCTTCCACCACCACCACCACCACCACCACCACCACCACCATGCGCACTTCCCTCCAGCACCCCCAGAACCACAACTGACCCCAGGGACCTGTATAACACTCAT
GGAAAGTTACTGGGACCTTGCTCTCAAGACCTGGAGGATCTGTCGGCCTTAATTCATAAACTCTATGAATTTTAGACAAAAATAAATTAGACAGAGTGATGA

hide sequence

RefSeq Acc Id:

XM_008765685 ⟹ XP_008763907

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	117,793,643 - 117,863,574 (-)	NCBI
mRatBN7.2	7	115,913,704 - 115,983,508 (-)	NCBI
Rnor_6.0	7	125,650,469 - 125,720,694 (+)	NCBI

Sequence:

show sequence

CTCGGCCCCCGCCCCGCCCCGGGAGCTGCCCCAATGAGGCGGCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCACGGATCGCAGCGCTCAGCGACAAACAAGCTTTGGGATC
CTCCACTGCAGTGCCTGTCACAGGTCCTCAGGTCAGCTCCCTGCAGAGGTTGGCCGGGCAAGGAGCAGCAGTGCTACCTCAGGTTAGGCCAAAGACTCTGATTCCAGACAGCCTCCCTGTCACCCCGG
GCAGGGACCGGCCACCCAAGCAACCCCCAACATTCCAAAAGGCCACTGTGGTCAGCATCAAGAACCCCAGCCCAGCCCTCCCCACTGCCAACAACACCGTCAACCATGTGCCAACACCCAGCAGCCAG
ACCCAGGCCCTCACCGAGCCCACCGCCATCACCTCACCCCTGAGCAGTGCCGGGGTGGCCTATGCCATCATCTCCACCTCCCCCAGCAATGCTGCCACCATCACCCCCAGTACCACCGTGCCCGTGGC
CAGCGACGGCATCAAAGTGCAGCCCCTCCTCATCAGTGCTGACAAAAAGGTCATCATCATTCAGCCCCAAGTGAAGACACAGCCAGAGAGTTCAGCAGAGCCCGAGCCACCCACGGAGGAGCCATCTC
AGGGAGCTCAGGACACCAAGGAAGATCAGCCCCCCAGCAAGGAGAATCCTGAGAAAATCGCCTTCATGGTAGCTCTAGGCCTGGTCACAACAGAACATCTAGAAGAGATCCAGAGCAAGCGGCAGGAG
AGGAAGAGGAGGAGCACGGCCAACCCTGCCTATAGCGGCTTCTTGGAGACCGAGAGGAAGCGACTGGCCTCCAGTTATCTCCACAACCCCTTGTTCCTCACAGCACGAGCCAATGAGGACCCCTGCTG
GAAGGGTGAAATCACCCATGATGAATTCTGTGCTGCCTGCAAGCGAGGAGCCAGCCTGCAGCCCTGCGGCACCTGTTCAGGGGCCTACCACCTCAGCTGCCTGGACCCGCCCCTTAAGACGGCACCCA
AGGGCGTGTGGGTCTGCCCCAAGTGCCAGCGGAAGGCCTTAAAGAAAGACGAGGGTGTGCCCTGGACTGGAATGCTGGCCATTGTACACTCCTATGTCACCCACAAGACAGTGAAAGAAGAGGAGAAG
CAGAAGCTGTTGCAGCGTGGCAGCGAACTGCAGTCTGAACACCAGCAGCTGGAGGAGCGGGACCGGCAGCTGGCCTCAGCTGTGAAGAAATGCTTGGAGCTGAAGACAAGCCTGTTGGCCCGCCAACG
GGGTACACAGTCATCGCTGGACCGCATCCGAGCCCTCCTCAGACTGATCCAGGGTGAGCAGATGCTTCAGGTCGCTGTGGCAACCACCAGCCCCACCCCGCTTCTGGCGGGGGCCTGGACCAAGCCTT
CCACCACCACCACCACCACCACCACCACCACCACCATGCGCACTTCCCTCCAGCACCCCCAGAACCACAACTGACCCCAGGGACCTGTATAACACTCATGGAAAGTTACTGGGACCTTGCTCTCAAGA
CCTGGAGGATCTGTCGGCCTTAATTCATAAACTCTATGAATTTTAGACAAAAATAAATTAGACAGAGTGATGAGGAGAGAAAGGAGGAGTGAGATGGGTGTCCTAGACCCAGAACCAGCCTGAGGTGG
ATTCTTACACCAGTTGCAGGGGACACCTGGAGGCCAGGTGAGGGTGTCTCAGACCTAGGCACAGGAGGCCCTCACCTTCGGCTGTCAGGCCTCCCTGGCTTTCAGCCTTTATGGCCAGCTCTCTCCTT
ACAGTGTCCCCCTCAAGAGAGGAAGACTTTAGACTTCAGAGAGTGAGGCAGACTGGGCCGCACATGGCTTGTGAGGAGGCAAGCTGACAACGGGTAGCTGGTTAGTGGGGTGGGCGGGGTGAGCCTCT
GGAACAAGAGAGGGTAGCTAACCTAGGTAGTTCCCCAATGGCCCTGTGGCTCCCTGTGCCCTGCTGGCCCCTAATCCATCAGTATTACCATGTTGGAAATCAGTCACTTAACTGGACAAGTAACAGGC
CAACTTCTCCTGGGGTCACCGCTGCATGGGCTGCCCGGCCTAGCCTCTGCCTCATCCTTCCCTAACTCATGCTCTTGTCGCTGCCCAACTCTTCCTATTGCCAATCCCTGGAATTTTCCTCATGGAGT
TCTGGGCTAGAGGGAGCAGTCACCTAGCTGGGGAGGCACCTGGCAGGTTTCAACTCCCAACCAGAGGCCTCTAGAGCACTCTCTCCTTCGCAGGAGCCGCCGAGCGCCCTGCCCACTTCTTGCCAGTT
AAAGACACTATGCCAAAAAGAGCTTCACACTTTTTGTATAGCGTTTTTTTTTTTCGTTATTATTGTTGTTATTGTATGATCCGTAATGTGAACCGCACCCCTGCCTGCCTCCCTCTGCATCTGATAGT
CTCTGCTCTGATACAGGAATTGGTAACCTCGCCTGAGAGGCACCTGATGGAGCATCCAGAAGGGACTTAAAGATCCAGGGGGAAGGCAGAGAGGACGGTGCCACTTGGGGCCCTGGCCTTTGGAGACT
CCAGAGCCCTCAATGCTCTCCTCAAAGCTGTCTCCTTATTTGCAGGGAGTGTAGGCTCCTAGGCACCCTGGGGGCTCCTGCACCTCTGTGAGCCATGCAGCCCACTTCGCAAGCCTCACCCTGTCCCG
AGGGACACAGCACAACCCATATGTGACCAGGAGCCACAGAGCTCCCCGCCGAGCATATCACACGGTGCCGAATTGCAGTGAGCACGCGCGCATGCGCCAGGGCCACAGACGCACACCTGTGCACACAG
ACACACGTGCAGAGCGGGAAGGCTGGCTGGGATCCCGCCACCAGCTACTTTCCCCCTTGTCATTTCTCACGACTCCGGGAGAAACTGTGCTGTAGGATACAAATCTATTTTAATACACATTACACTGG
GTTGAACAAGATTTTTATATTCTTTTATTGATGAACAACGTGGGCCCTGTGAGGCACACGCCTTTATATATTGGTTACGCGGTGCCGATTATGCATTACCGCATGGCTGGCGACGTAACTGTCTTCAG
GTTCTTTTGTTGGTTTGATTTTCTTCCTGGATGGATTGAGTTCGATTTTGTAAGAAACGTGGGAGGATGTTGGAAGGTTGGACCCGGGAGGGGGAGCTGCTGACGCGTCTCGAGACTTAGTTTTGGGT
TTTCTTTTTGGGACCAAGGGGGACCGTCCAGTGGATAGTGGCTAGAGAAAGTGTTTGTCTTAAATATACCAGTGTAGTTTTCCTTCTGTATGATGCATTAAATCCAATTTCAAAGCC

hide sequence

RefSeq Acc Id:

XM_039078846 ⟹ XP_038934774

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	117,797,309 - 117,863,571 (-)	NCBI
mRatBN7.2	7	115,917,399 - 115,983,506 (-)	NCBI


Protein RefSeqs	NP_001124152	(Get FASTA)	NCBI Sequence Viewer
	XP_008763907	(Get FASTA)	NCBI Sequence Viewer
	XP_038934774	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM15598	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000017906
	ENSRNOP00000017906.4
	ENSRNOP00000104335

RefSeq Acc Id:

NP_001124152 ⟸ NM_001130680

- UniProtKB:

D4A9U0 (UniProtKB/TrEMBL), A6HTC4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MELQSRSEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGSSTAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVTPGRDRPPKQPPTFQKATVVSIKNPSPALPTANNTVNHVPTPSS
QTQALTEPTAITSPLSSAGVAYAIISTSPSNAATITPSTTVPVASDGIKVQPLLISADKKVIIIQPQVKTQPESSAEPEPPTEEPSQGAQDTKEDQPPSKENPEKIAFMVALGLVTTEHLEEIQSKRQ
ERKRRSTANPAYSGFLETERKRLASSYLHNPLFLTARANEDPCWKGEITHDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTAPKGVWVCPKCQRKALKKDEGVPWTGMLAIVHSYVTHKTVKEEE
KQKLLQRGSELQSEHQQLEERDRQLASAVKKCLELKTSLLARQRGTQSSLDRIRALLRLIQGEQMLQVAVATTSPTPLLAGAWTKPSTTTTTTTTTTTMRTSLQHPQNHN

hide sequence

RefSeq Acc Id:

XP_008763907 ⟸ XM_008765685

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRRQPQNGDLKKQLHERQPRIAALSDKQALGSSTAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVTPGRDRPPKQPPTFQKATVVSIKNPSPALPTANNTVNHVPTPSSQTQALTEPTAIT
SPLSSAGVAYAIISTSPSNAATITPSTTVPVASDGIKVQPLLISADKKVIIIQPQVKTQPESSAEPEPPTEEPSQGAQDTKEDQPPSKENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRSTANPAY
SGFLETERKRLASSYLHNPLFLTARANEDPCWKGEITHDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTAPKGVWVCPKCQRKALKKDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQ
SEHQQLEERDRQLASAVKKCLELKTSLLARQRGTQSSLDRIRALLRLIQGEQMLQVAVATTSPTPLLAGAWTKPSTTTTTTTTTTTMRTSLQHPQNHN

hide sequence

Ensembl Acc Id:

ENSRNOP00000017906 ⟸ ENSRNOT00000017906

RefSeq Acc Id:	XP_038934774 ⟸ XM_039078846
- Peptide Label:	isoform X2

Protein Domains

PHD-type

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A9U0-F1-model_v2	AlphaFold	D4A9U0	1-494	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-32569	BioCyc
Ensembl Genes	ENSRNOG00000013067	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000017906	ENTREZGENE
	ENSRNOT00000017906.7	UniProtKB/TrEMBL
	ENSRNOT00000129997	ENTREZGENE
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
InterPro	Znf_FYVE_PHD	UniProtKB/TrEMBL
	Znf_PHD	UniProtKB/TrEMBL
	Znf_PHD-finger	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
KEGG Report	rno:300117	UniProtKB/TrEMBL
NCBI Gene	300117	ENTREZGENE
PANTHER	PHD FINGER PROTEIN	UniProtKB/TrEMBL
	PHD FINGER PROTEIN 21B	UniProtKB/TrEMBL
Pfam	PHD	UniProtKB/TrEMBL
PhenoGen	Phf21b	PhenoGen
PROSITE	ZF_PHD_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000013067	RatGTEx
SMART	PHD	UniProtKB/TrEMBL
Superfamily-SCOP	FYVE_PHD_ZnF	UniProtKB/TrEMBL
UniProt	A6HTC4	ENTREZGENE, UniProtKB/TrEMBL
	D4A9U0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Phf21b	PHD finger protein 21B	Phf21b_predicted	PHD finger protein 21B (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Phf21b_predicted	PHD finger protein 21B (predicted)	RGD1308739_predicted	similar to hypothetical protein BC012187 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1308739_predicted	similar to hypothetical protein BC012187 (predicted)	LOC300117_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC300117_predicted	similar to hypothetical protein BC012187 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Send us a Message

Imported Disease Annotations - ClinVar