Mrgbp (MRG domain binding protein) - Rat Genome Database

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Gene: Mrgbp (MRG domain binding protein) Rattus norvegicus
Analyze
Symbol: Mrgbp
Name: MRG domain binding protein
RGD ID: 1308612
Description: Predicted to be involved in positive regulation of double-strand break repair via homologous recombination; regulation of cell cycle; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be part of NuA4 histone acetyltransferase complex and nucleosome. Orthologous to human MRGBP (MRG domain binding protein); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; azoxystrobin; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC311713; MGC116321; MRG-binding protein; MRG/MORF4L binding protein; NEWGENE_1308612; RGD1308612; similar to Protein C20orf20
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83188,074,695 - 188,078,162 (+)NCBIGRCr8
mRatBN7.23167,697,129 - 167,700,592 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3167,697,185 - 167,700,592 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3172,077,260 - 172,080,666 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03181,036,351 - 181,039,757 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03177,698,111 - 177,701,518 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03175,924,456 - 175,927,925 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3176,087,700 - 176,090,268 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl3175,924,522 - 175,927,935 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03179,788,307 - 179,791,770 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43169,673,768 - 169,677,181 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3164,881,953 - 164,885,360 (-)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MrgbpRatdevelopmental and epileptic encephalopathy  ISOMRGBP (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathyClinVarPMID:24811917 more ...
MrgbpRatdevelopmental and epileptic encephalopathy 33  ISOMRGBP (Homo sapiens)8554872ClinVar Annotator: match by term: Epileptic encephalopathy more ...ClinVarPMID:24811917 more ...
MrgbpRatearly infantile epileptic encephalopathy  ISOMRGBP (Homo sapiens)8554872ClinVar Annotator: match by term: Early infantile epileptic encephalopathyClinVarPMID:24811917 more ...
MrgbpRatepilepsy  ISOMRGBP (Homo sapiens)8554872ClinVar Annotator: match by term: EpilepsyClinVarPMID:25741868
MrgbpRatneuronal ceroid lipofuscinosis  ISOMRGBP (Homo sapiens)8554872ClinVar Annotator: match by term: Ceroid storage diseaseClinVarPMID:25921748 more ...

1 to 20 of 40 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MrgbpRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464AHR protein alternative form affects the reaction [Tetrachlorodibenzodioxin results in decreased expression of MRGBP mRNA]CTDPMID:21215274
MrgbpRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of MRGBP mRNACTDPMID:34747641
MrgbpRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of MRGBP mRNACTDPMID:21215274
MrgbpRat2-hydroxypropanoic acid decreases expressionISOMRGBP (Homo sapiens)6480464Lactic Acid results in decreased expression of MRGBP mRNACTDPMID:30851411
MrgbpRatarsane multiple interactionsISOMRGBP (Homo sapiens)6480464[sodium arsenite results in increased abundance of Arsenic] which results in increased expression of MRGBP mRNACTDPMID:39836092
MrgbpRatarsenic atom multiple interactionsISOMRGBP (Homo sapiens)6480464[sodium arsenite results in increased abundance of Arsenic] which results in increased expression of MRGBP mRNACTDPMID:39836092
MrgbpRatazoxystrobin multiple interactionsEXP 6480464[azoxystrobin co-treated with 2-chloro-N-(4-chlorobiphenyl-2-yl)nicotinamide co-treated with Chlorpyrifos co-treated with Glyphosate co-treated with imidacloprid co-treated with Thiabendazole] results in increased expression of MRGBP mRNACTDPMID:33854195
MrgbpRatbenzo[a]pyrene decreases methylationISOMRGBP (Homo sapiens)6480464Benzo(a)pyrene results in decreased methylation of MRGBP promoterCTDPMID:27901495
MrgbpRatbenzo[a]pyrene diol epoxide I decreases expressionISOMRGBP (Homo sapiens)64804647 more ...CTDPMID:20382639
MrgbpRatbis(2-ethylhexyl) phthalate multiple interactionsISOMrgbp (Mus musculus)6480464[diethyl phthalate co-treated with Diethylhexyl Phthalate co-treated with diisononyl phthalate co-treated with Dibutyl Phthalate co-treated with diisobutyl phthalate co-treated with butylbenzyl phthalate] affects the expression of MRGBP mRNACTDPMID:39150890
MrgbpRatbis(2-ethylhexyl) phthalate decreases expressionISOMrgbp (Mus musculus)6480464Diethylhexyl Phthalate results in decreased expression of MRGBP mRNACTDPMID:34319233
MrgbpRatbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of MRGBP mRNACTDPMID:25181051
MrgbpRatbisphenol A increases expressionISOMRGBP (Homo sapiens)6480464bisphenol A results in increased expression of MRGBP mRNACTDPMID:29275510
MrgbpRatbisphenol F decreases expressionISOMrgbp (Mus musculus)6480464bisphenol F results in decreased expression of MRGBP mRNACTDPMID:38685157
MrgbpRatButylbenzyl phthalate multiple interactionsISOMrgbp (Mus musculus)6480464[diethyl phthalate co-treated with Diethylhexyl Phthalate co-treated with diisononyl phthalate co-treated with Dibutyl Phthalate co-treated with diisobutyl phthalate co-treated with butylbenzyl phthalate] affects the expression of MRGBP mRNACTDPMID:39150890
MrgbpRatcaffeine decreases phosphorylationISOMRGBP (Homo sapiens)6480464Caffeine results in decreased phosphorylation of MRGBP proteinCTDPMID:35688186
MrgbpRatchlorpyrifos multiple interactionsEXP 6480464[azoxystrobin co-treated with 2-chloro-N-(4-chlorobiphenyl-2-yl)nicotinamide co-treated with Chlorpyrifos co-treated with Glyphosate co-treated with imidacloprid co-treated with Thiabendazole] results in increased expression of MRGBP mRNACTDPMID:33854195
MrgbpRatchlorpyrifos increases expressionISOMrgbp (Mus musculus)6480464Chlorpyrifos results in increased expression of MRGBP mRNACTDPMID:37019170
MrgbpRatcyclosporin A increases expressionISOMRGBP (Homo sapiens)6480464Cyclosporine results in increased expression of MRGBP mRNACTDPMID:20106945
MrgbpRatdibutyl phthalate multiple interactionsISOMrgbp (Mus musculus)6480464[diethyl phthalate co-treated with Diethylhexyl Phthalate co-treated with diisononyl phthalate co-treated with Dibutyl Phthalate co-treated with diisobutyl phthalate co-treated with butylbenzyl phthalate] affects the expression of MRGBP mRNACTDPMID:39150890

1 to 20 of 40 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MrgbpRatbiological_process  ND 159840710/2014: no relevant rat dataRGD 
MrgbpRatchromatin organization involved_inIEAUniProtKB-KW:KW-01561600115GO_REF:0000043UniProtGO_REF:0000043
MrgbpRatpositive regulation of double-strand break repair via homologous recombination involved_inISOMRGBP (Homo sapiens)1624291 PMID:27153538RGDPMID:27153538
MrgbpRatpositive regulation of double-strand break repair via homologous recombination involved_inIEAUniProtKB:Q9NV56 and ensembl:ENSP000003595181600115GO_REF:0000107EnsemblGO_REF:0000107
MrgbpRatregulation of cell cycle involved_inISOMRGBP (Homo sapiens)1624291 PMID:27153538RGDPMID:27153538
MrgbpRatregulation of cell cycle involved_inIEAUniProtKB:Q9NV56 and ensembl:ENSP000003595181600115GO_REF:0000107EnsemblGO_REF:0000107
MrgbpRatregulation of DNA-templated transcription involved_inIEAInterPro:IPR0124231600115GO_REF:0000002InterProGO_REF:0000002
MrgbpRatregulation of transcription by RNA polymerase II involved_inIBAPANTHER:PTN001783547 and SGD:S0000050801600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MrgbpRatH4/H2A histone acetyltransferase complex part_ofIEAInterPro:IPR0124231600115GO_REF:0000002InterProGO_REF:0000002
MrgbpRatNuA4 histone acetyltransferase complex part_ofISOMRGBP (Homo sapiens)1624291 PMID:27153538RGDPMID:27153538
MrgbpRatNuA4 histone acetyltransferase complex part_ofIEAUniProtKB:Q9NV56 and ensembl:ENSP000003595181600115GO_REF:0000107EnsemblGO_REF:0000107
MrgbpRatNuA4 histone acetyltransferase complex part_ofIBACGD:CAL0000190105 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
MrgbpRatnucleoplasm located_inIEAUniProtKB:Q9NV56 and ensembl:ENSP000003595181600115GO_REF:0000107EnsemblGO_REF:0000107
MrgbpRatnucleoplasm located_inISOMRGBP (Homo sapiens)1624291 RGDGO_REF:0000052
MrgbpRatnucleosome part_ofISOMRGBP (Homo sapiens)1624291 PMID:27153538RGDPMID:27153538
MrgbpRatnucleosome part_ofIEAUniProtKB:Q9NV56 and ensembl:ENSP000003595181600115GO_REF:0000107EnsemblGO_REF:0000107
MrgbpRatnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
MrgbpRatnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
MrgbpRatnucleus located_inIEAInterPro:IPR0124231600115GO_REF:0000002InterProGO_REF:0000002
1 to 11 of 11 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MrgbpRatprotein binding enablesISOMRGBP (Homo sapiens)1624291UniProtKB:P0DPK4 more ...RGDPMID:12963728 more ...

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MrgbpRatINO80 family mediated chromatin remodeling pathway  ISOMRGBP (Homo sapiens)9068941 RGDPMID:21502417 and REF_RGD_ID:9495926

#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive gene review and curation RGD comprehensive gene curation
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.


Mrgbp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83188,074,695 - 188,078,162 (+)NCBIGRCr8
mRatBN7.23167,697,129 - 167,700,592 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3167,697,185 - 167,700,592 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3172,077,260 - 172,080,666 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03181,036,351 - 181,039,757 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03177,698,111 - 177,701,518 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03175,924,456 - 175,927,925 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3176,087,700 - 176,090,268 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl3175,924,522 - 175,927,935 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03179,788,307 - 179,791,770 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43169,673,768 - 169,677,181 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3164,881,953 - 164,885,360 (-)NCBICelera
Cytogenetic Map3q43NCBI
MRGBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382062,796,473 - 62,801,729 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2062,796,473 - 62,801,729 (+)EnsemblGRCh38hg38GRCh38
GRCh372061,427,825 - 61,433,081 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362060,898,283 - 60,902,390 (+)NCBINCBI36Build 36hg18NCBI36
Build 342060,898,282 - 60,902,385NCBI
Celera2058,103,435 - 58,107,575 (+)NCBICelera
Cytogenetic Map20q13.33NCBI
HuRef2058,146,494 - 58,149,978 (+)NCBIHuRef
CHM1_12061,328,199 - 61,332,994 (+)NCBICHM1_1
T2T-CHM13v2.02064,595,441 - 64,600,697 (+)NCBIT2T-CHM13v2.0
Mrgbp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392180,222,990 - 180,228,097 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2180,223,097 - 180,228,097 (+)EnsemblGRCm39 Ensembl
GRCm382180,581,198 - 180,586,304 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2180,581,304 - 180,586,304 (+)EnsemblGRCm38mm10GRCm38
MGSCv372180,316,009 - 180,320,339 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362180,512,120 - 180,515,713 (+)NCBIMGSCv36mm8
Celera2184,667,167 - 184,671,498 (+)NCBICelera
Cytogenetic Map2H4NCBI
cM Map2103.12NCBI
Mrgbp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555281,320,061 - 1,324,094 (-)NCBIChiLan1.0ChiLan1.0
MRGBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22168,584,085 - 68,588,220 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12068,577,217 - 68,581,346 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02059,183,842 - 59,187,982 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12060,459,870 - 60,483,493 (+)NCBIpanpan1.1PanPan1.1panPan2
MRGBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12446,634,580 - 46,637,222 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2446,634,668 - 46,637,354 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2445,816,710 - 45,822,957 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02447,505,100 - 47,511,317 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2447,504,658 - 47,510,556 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12446,602,472 - 46,609,037 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02446,725,850 - 46,732,370 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02447,480,756 - 47,488,340 (+)NCBIUU_Cfam_GSD_1.0
Mrgbp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640194,849,734 - 194,854,364 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651410,303,597 - 10,307,185 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493651410,303,870 - 10,308,007 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRGBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1762,058,424 - 62,062,960 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11762,058,401 - 62,062,962 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MRGBP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121,428,152 - 1,433,228 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21,428,796 - 1,433,148 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605049,282,255 - 49,287,337 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mrgbp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474128,571,417 - 28,576,679 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474128,571,407 - 28,576,034 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Mrgbp
13 total Variants

Predicted Target Of
Summary Value
Count of predictions:748
Count of miRNA genes:226
Interacting mature miRNAs:273
Transcripts:ENSRNOT00000071953, ENSRNOT00000073679
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3131635904169034231Rat
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141074471169034231Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3149040888168026850Rat
1300161Rf10Renal function QTL 103.57renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)3161192952169034231Rat

1 to 10 of 16 rows
D3Rat242  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23167,680,072 - 167,680,372 (+)MAPPERmRatBN7.2
Rnor_6.03176,070,354 - 176,070,653NCBIRnor6.0
Rnor_5.03179,771,043 - 179,771,342UniSTSRnor5.0
RGSC_v3.43169,656,755 - 169,657,054UniSTSRGSC3.4
Celera3164,901,785 - 164,902,084UniSTS
SHRSP x BN Map391.4899RGD
SHRSP x BN Map391.4899UniSTS
Cytogenetic Map3q43UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
3 11 43 82 57 60 41 19 41 160 73 74 35 41 19



Ensembl Acc Id: ENSRNOT00000073679   ⟹   ENSRNOP00000066113
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl3176,087,700 - 176,090,268 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000086626   ⟹   ENSRNOP00000070225
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3167,697,185 - 167,700,583 (+)Ensembl
Rnor_6.0 Ensembl3175,924,522 - 175,927,935 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000114736   ⟹   ENSRNOP00000088881
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3167,697,200 - 167,700,592 (+)Ensembl
RefSeq Acc Id: NM_001173739   ⟹   NP_001167210
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,074,755 - 188,078,162 (+)NCBI
mRatBN7.23167,697,185 - 167,700,592 (+)NCBI
Rnor_6.03175,924,518 - 175,927,925 (+)NCBI
Rnor_5.03179,788,307 - 179,791,770 (+)NCBI
Celera3164,881,953 - 164,885,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063283891   ⟹   XP_063139961
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,074,695 - 188,078,162 (+)NCBI
RefSeq Acc Id: XM_063283892   ⟹   XP_063139962
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,074,699 - 188,076,726 (+)NCBI
RefSeq Acc Id: XM_063283894   ⟹   XP_063139964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,074,698 - 188,076,726 (+)NCBI
1 to 10 of 10 rows
Protein RefSeqs NP_001167210 (Get FASTA)   NCBI Sequence Viewer  
  XP_063139961 (Get FASTA)   NCBI Sequence Viewer  
  XP_063139962 (Get FASTA)   NCBI Sequence Viewer  
  XP_063139964 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH99155 (Get FASTA)   NCBI Sequence Viewer  
  EDL88799 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000070225
  ENSRNOP00000070225.1
  ENSRNOP00000088881
  ENSRNOP00000088881.1
1 to 10 of 10 rows
RefSeq Acc Id: NP_001167210   ⟸   NM_001173739
- UniProtKB: G3V751 (UniProtKB/TrEMBL),   A6KM92 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000066113   ⟸   ENSRNOT00000073679
Ensembl Acc Id: ENSRNOP00000070225   ⟸   ENSRNOT00000086626
Ensembl Acc Id: ENSRNOP00000088881   ⟸   ENSRNOT00000114736
RefSeq Acc Id: XP_063139961   ⟸   XM_063283891
- Peptide Label: isoform X1
- UniProtKB: A6KM93 (UniProtKB/TrEMBL)

Name Modeler Protein Id AA Range Protein Structure
AF-G3V751-F1-model_v2 AlphaFold G3V751 1-204 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



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Database
Acc Id
Source(s)
BioCyc Gene G2FUF-46328 BioCyc
Ensembl Genes ENSRNOG00000045955 Ensembl
  ENSRNOG00000059891 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000086626 ENTREZGENE
  ENSRNOT00000086626.2 UniProtKB/TrEMBL
  ENSRNOT00000114736 ENTREZGENE
  ENSRNOT00000114736.1 UniProtKB/TrEMBL
InterPro EAF7 UniProtKB/TrEMBL
KEGG Report rno:311713 UniProtKB/TrEMBL
NCBI Gene 311713 ENTREZGENE
PANTHER MRG/MORF4L-BINDING PROTEIN UniProtKB/TrEMBL
  PTHR13581 UniProtKB/TrEMBL
Pfam Eaf7 UniProtKB/TrEMBL
PhenoGen Mrgbp PhenoGen
RatGTEx ENSRNOG00000045955 RatGTEx
  ENSRNOG00000059891 RatGTEx
UniProt A0A8I6AAD6 ENTREZGENE, UniProtKB/TrEMBL
  A6KM92 ENTREZGENE, UniProtKB/TrEMBL
  A6KM93 ENTREZGENE, UniProtKB/TrEMBL
  A6KM94 ENTREZGENE, UniProtKB/TrEMBL
  A6KM95 ENTREZGENE, UniProtKB/TrEMBL
  G3V751 ENTREZGENE, UniProtKB/TrEMBL
  Q4KLK2_RAT UniProtKB/TrEMBL
1 to 23 of 23 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Mrgbp  MRG domain binding protein  NEWGENE_1308612  MRG/MORF4L binding protein  Data merged from RGD:11438794 737654 PROVISIONAL
2016-10-12 Mrgbp  MRG domain binding protein  Mrgbp  MRG/MORF4L binding protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-08-02 NEWGENE_1308612  MRG/MORF4L binding protein      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-11-07 Mrgbp  MRG/MORF4L binding protein  RGD1308612  similar to Protein C20orf20  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1308612  similar to Protein C20orf20  RGD1308612_predicted  similar to Protein C20orf20 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1308612_predicted  similar to Protein C20orf20 (predicted)  LOC311713_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC311713_predicted  similar to Protein C20orf20 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL