Symbol:
Mrgbp
Name:
MRG domain binding protein
RGD ID:
1308612
Description:
Predicted to be involved in positive regulation of double-strand break repair via homologous recombination; regulation of cell cycle; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be part of NuA4 histone acetyltransferase complex and nucleosome. Orthologous to human MRGBP (MRG domain binding protein); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; azoxystrobin; bisphenol A.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC311713; MGC116321; MRG-binding protein; MRG/MORF4L binding protein; NEWGENE_1308612; RGD1308612; similar to Protein C20orf20
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 188,074,695 - 188,078,162 (+) NCBI GRCr8 mRatBN7.2 3 167,697,129 - 167,700,592 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 167,697,185 - 167,700,592 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 172,077,260 - 172,080,666 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 181,036,351 - 181,039,757 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 177,698,111 - 177,701,518 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 175,924,456 - 175,927,925 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 176,087,700 - 176,090,268 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 175,924,522 - 175,927,935 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 179,788,307 - 179,791,770 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 169,673,768 - 169,677,181 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 3 164,881,953 - 164,885,360 (-) NCBI Celera Cytogenetic Map 3 q43 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Mrgbp (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 188,074,695 - 188,078,162 (+) NCBI GRCr8 mRatBN7.2 3 167,697,129 - 167,700,592 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 167,697,185 - 167,700,592 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 172,077,260 - 172,080,666 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 181,036,351 - 181,039,757 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 177,698,111 - 177,701,518 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 175,924,456 - 175,927,925 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 176,087,700 - 176,090,268 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 175,924,522 - 175,927,935 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 179,788,307 - 179,791,770 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 169,673,768 - 169,677,181 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 3 164,881,953 - 164,885,360 (-) NCBI Celera Cytogenetic Map 3 q43 NCBI
MRGBP (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 20 62,796,473 - 62,801,729 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 20 62,796,473 - 62,801,729 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 20 61,427,825 - 61,433,081 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 20 60,898,283 - 60,902,390 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 20 60,898,282 - 60,902,385 NCBI Celera 20 58,103,435 - 58,107,575 (+) NCBI Celera Cytogenetic Map 20 q13.33 NCBI HuRef 20 58,146,494 - 58,149,978 (+) NCBI HuRef CHM1_1 20 61,328,199 - 61,332,994 (+) NCBI CHM1_1 T2T-CHM13v2.0 20 64,595,441 - 64,600,697 (+) NCBI T2T-CHM13v2.0
Mrgbp (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 2 180,222,990 - 180,228,097 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 2 180,223,097 - 180,228,097 (+) Ensembl GRCm39 Ensembl GRCm38 2 180,581,198 - 180,586,304 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 2 180,581,304 - 180,586,304 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 2 180,316,009 - 180,320,339 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 2 180,512,120 - 180,515,713 (+) NCBI MGSCv36 mm8 Celera 2 184,667,167 - 184,671,498 (+) NCBI Celera Cytogenetic Map 2 H4 NCBI cM Map 2 103.12 NCBI
Mrgbp (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955528 1,320,061 - 1,324,094 (-) NCBI ChiLan1.0 ChiLan1.0
MRGBP (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 21 68,584,085 - 68,588,220 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 20 68,577,217 - 68,581,346 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 20 59,183,842 - 59,187,982 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 20 60,459,870 - 60,483,493 (+) NCBI panpan1.1 PanPan1.1 panPan2
MRGBP (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 24 46,634,580 - 46,637,222 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 24 46,634,668 - 46,637,354 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 24 45,816,710 - 45,822,957 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 24 47,505,100 - 47,511,317 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 24 47,504,658 - 47,510,556 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 24 46,602,472 - 46,609,037 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 24 46,725,850 - 46,732,370 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 24 47,480,756 - 47,488,340 (+) NCBI UU_Cfam_GSD_1.0
Mrgbp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024408640 194,849,734 - 194,854,364 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936514 10,303,597 - 10,307,185 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936514 10,303,870 - 10,308,007 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
MRGBP (Sus scrofa - pig)
MRGBP (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 2 1,428,152 - 1,433,228 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 2 1,428,796 - 1,433,148 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666050 49,282,255 - 49,287,337 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Mrgbp (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 748 Count of miRNA genes: 226 Interacting mature miRNAs: 273 Transcripts: ENSRNOT00000071953, ENSRNOT00000073679 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
9589106 Insul23 Insulin level QTL 23 13.86 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 3 131635904 169034231 Rat 2312673 Scl63 Serum cholesterol level QTL 63 0.001 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 3 98535255 168026850 Rat 1559282 Emca5 Estrogen-induced mammary cancer QTL 5 3.9 mammary gland integrity trait (VT:0010552) percentage of study population developing mammary tumors during a period of time (CMO:0000948) 3 43827364 169034231 Rat 1578653 Vnigr3 Vascular neointimal growth QTL 3 3.1 artery morphology trait (VT:0002191) artery neointimal hyperplastic lesion area (CMO:0001414) 3 130656562 169034231 Rat 2303620 Vencon4 Ventilatory control QTL 4 3.9 respiration trait (VT:0001943) tidal volume (CMO:0000222) 3 127162703 168026850 Rat 1298068 Bp167 Blood pressure QTL 167 0.004 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 3 141074471 169034231 Rat 2298477 Eau4 Experimental allergic uveoretinitis QTL 4 0.0011 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 3 137398739 169034231 Rat 2312659 Slep7 Serum leptin concentration QTL 7 0.001 blood leptin amount (VT:0005667) serum leptin level (CMO:0000780) 3 98535255 168026850 Rat 1578666 Vnigr1 Vascular neointimal growth QTL 1 4.6 artery morphology trait (VT:0002191) artery lumen area (CMO:0001409) 3 149040888 168026850 Rat 1300161 Rf10 Renal function QTL 10 3.57 renal blood flow trait (VT:2000006) absolute change in renal vascular resistance (CMO:0001900) 3 161192952 169034231 Rat 8552791 Vie2 Viral induced encephalitis QTL 2 4.1 brain integrity trait (VT:0010579) encephalitis incidence/prevalence measurement (CMO:0002361) 3 145956084 169034231 Rat 1578656 Vnigr2 Vascular neointimal growth QTL 2 4.2 artery morphology trait (VT:0002191) lesioned artery residual lumen area (CMO:0001417) 3 130656562 169034231 Rat 2317883 Alcrsp26 Alcohol response QTL 26 1.8 0.63 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 3 145526770 169034231 Rat 8552952 Pigfal13 Plasma insulin-like growth factor 1 level QTL 13 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 3 138799500 169034231 Rat 631541 Bp81 Blood pressure QTL 81 4 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 3 124122556 169034231 Rat 2312670 Bw94 Body weight QTL 94 0.01 inguinal fat pad mass (VT:0010424) inguinal fat pad weight to body weight ratio (CMO:0001253) 3 98535255 168026850 Rat
D3Rat242
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 167,680,072 - 167,680,372 (+) MAPPER mRatBN7.2 Rnor_6.0 3 176,070,354 - 176,070,653 NCBI Rnor6.0 Rnor_5.0 3 179,771,043 - 179,771,342 UniSTS Rnor5.0 RGSC_v3.4 3 169,656,755 - 169,657,054 UniSTS RGSC3.4 Celera 3 164,901,785 - 164,902,084 UniSTS SHRSP x BN Map 3 91.4899 RGD SHRSP x BN Map 3 91.4899 UniSTS Cytogenetic Map 3 q43 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
3
11
43
82
57
60
41
19
41
160
73
74
35
41
19
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000073679 ⟹ ENSRNOP00000066113
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 3 176,087,700 - 176,090,268 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000086626 ⟹ ENSRNOP00000070225
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 167,697,185 - 167,700,583 (+) Ensembl Rnor_6.0 Ensembl 3 175,924,522 - 175,927,935 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000114736 ⟹ ENSRNOP00000088881
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 167,697,200 - 167,700,592 (+) Ensembl
RefSeq Acc Id:
NM_001173739 ⟹ NP_001167210
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 188,074,755 - 188,078,162 (+) NCBI mRatBN7.2 3 167,697,185 - 167,700,592 (+) NCBI Rnor_6.0 3 175,924,518 - 175,927,925 (+) NCBI Rnor_5.0 3 179,788,307 - 179,791,770 (+) NCBI Celera 3 164,881,953 - 164,885,360 (-) NCBI
Sequence:
CGGGCGCTCGTCGCTCGCCGGCGGCCATGGGGGAGGCCGAGGTAGGCGGCACGGGCGCCCCAGGCGATAAGGGCCCAGGCGAGGCAGCCCCGAGCCCTGCTGAGGAGACGGTGGTGTGGAGCCCTGAA GTGGAAGTGTGCCTCTTCCACGCCATGCTGGGCCACAAGCCTGTCGGGGTGAATCGACACTTCCACATGATTTGTATCCGAGACAAGTTCAGCCAGAATATTGGGCGCCAGGTTCCATCCAAGGTGAT CTGGGACCATTTGAGCACTATGTACGACATGCAGGCACTGCACGAGTCTGAGATTCTGCCATTCCCAAATCCAGAGAGGAACTTTGTCCTTCCCGATGAGATCATTCAGGAAGTCCGAGAAGGAAAAG TGGTCATTGAAGAAGAAATGAAGGAGGAGATGAAGGAGGATGTGGACCCCCACAGTGGGGCTGATGACGTTTTTTCATCTTCAGGGAGCTTGGGGAAAGCATTAGAAAAATCCAGCAAAGACAAAGAG AAGAACTCCTCAGACTTGGGGTGCAAAGAAGGGGCAGACAAGCGGAAGCGCAGCCGGGTCACTGACAAGGTCCTGACTGCCAACAGCAATCCCTCCAGCCCCAGTGCTGCCAAGAGGCGCCGCACATA GACACCTCAGCCCCAGGTGGCCAAGAGATGCTCCAGCTGCCTGTCCTCAGGTCCCTGGGTGAATGTGGCCATCCAGCAGAGATGCTAGTGGGGCTTCCGCTGTGTCATCAGACCTCCAGAGCACTTGA TTGGTCCAAAAGGCCAGCAAGACCGGTGTCCACTCTGCTGGATGGTGAAGCCTCTGAGCCAGCCTCTTGCTTTCTCCTGGTCAGTTCCCTTATGCCCACAGTGTGTGGAGAAGAGCAGGTGCGTGGGC CAGAGGACCAAGAGTCAGCAAGCAATAAGACGTCACCCTCACTGTCCTCAGGAGCCAGGCATCCTCCCTGGGTGCCCAGTCTTTGCATCTGCTTTTCCTGTAAGACTCCATTGTGCACTGGCATCCAG AGAAGGTGTCTTTGGAGTTCACACAGCACACACTGTGCACAGAAGGCCTCCCCCATCTGGGAAATAGAACTGGATATTTTGCCTCATTCACTTGTACTGTAATAGTGTATATAATTTAGTTGGTATTT CACTATTTAATTTTTAAGAAGCCTATTTTACTAGTGTTTTGTATGAAGAAAAATACTGCAGAAGTTAAACCTGTGATGTGTTTTTTTGAGCTGTTTTGTTTTAAGGTAACTACTGAGATACGTCTGGC TGTTTTTATATGCCAGATACAGAGAATTTTTAGCGGTTATTTTTGTAATTTTAGTAACTTGGAAAAGACCAAATAAGGGGGTGGAACAAAGGAACAGCCATCAGACTGAAAAGCCAGTGGCCTGATGG CTGAAGCACATTTTCATTTGCAGGATATTAAAGCATTAAAAAACTAAAAAAAAAAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
XM_063283891 ⟹ XP_063139961
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 188,074,695 - 188,078,162 (+) NCBI
RefSeq Acc Id:
XM_063283892 ⟹ XP_063139962
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 188,074,699 - 188,076,726 (+) NCBI
RefSeq Acc Id:
XM_063283894 ⟹ XP_063139964
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 188,074,698 - 188,076,726 (+) NCBI
RefSeq Acc Id:
NP_001167210 ⟸ NM_001173739
- UniProtKB:
G3V751 (UniProtKB/TrEMBL), A6KM92 (UniProtKB/TrEMBL)
- Sequence:
MGEAEVGGTGAPGDKGPGEAAPSPAEETVVWSPEVEVCLFHAMLGHKPVGVNRHFHMICIRDKFSQNIGRQVPSKVIWDHLSTMYDMQALHESEILPFPNPERNFVLPDEIIQEVREGKVVIEEEMKE EMKEDVDPHSGADDVFSSSGSLGKALEKSSKDKEKNSSDLGCKEGADKRKRSRVTDKVLTANSNPSSPSAAKRRRT
hide sequence
Ensembl Acc Id:
ENSRNOP00000066113 ⟸ ENSRNOT00000073679
Ensembl Acc Id:
ENSRNOP00000070225 ⟸ ENSRNOT00000086626
Ensembl Acc Id:
ENSRNOP00000088881 ⟸ ENSRNOT00000114736
RefSeq Acc Id:
XP_063139961 ⟸ XM_063283891
- Peptide Label:
isoform X1
- UniProtKB:
A6KM93 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063139964 ⟸ XM_063283894
- Peptide Label:
isoform X3
- UniProtKB:
A6KM94 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063139962 ⟸ XM_063283892
- Peptide Label:
isoform X2
- UniProtKB:
A0A8I6AAD6 (UniProtKB/TrEMBL), A6KM95 (UniProtKB/TrEMBL)
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2021-03-09
Mrgbp
MRG domain binding protein
NEWGENE_1308612
MRG/MORF4L binding protein
Data merged from RGD:11438794
737654
PROVISIONAL
2016-10-12
Mrgbp
MRG domain binding protein
Mrgbp
MRG/MORF4L binding protein
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2016-08-02
NEWGENE_1308612
MRG/MORF4L binding protein
Symbol and Name status set to provisional
70820
PROVISIONAL
2012-11-07
Mrgbp
MRG/MORF4L binding protein
RGD1308612
similar to Protein C20orf20
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2005-12-06
RGD1308612
similar to Protein C20orf20
RGD1308612_predicted
similar to Protein C20orf20 (predicted)
Symbol and Name updated
1559027
APPROVED
2005-01-20
RGD1308612_predicted
similar to Protein C20orf20 (predicted)
LOC311713_predicted
Symbol and Name status set to approved
1331353
APPROVED
2005-01-12
LOC311713_predicted
similar to Protein C20orf20 (predicted)
Symbol and Name status set to provisional
70820
PROVISIONAL