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Gene: Pip5k1a (phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha) Rattus norvegicus

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Symbol:

Pip5k1a

Name:

phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha

RGD ID:

1306127

Description:

Predicted to enable 1-phosphatidylinositol-4-phosphate 5-kinase activity and kinase binding activity. Predicted to be involved in several processes, including activation of GTPase activity; focal adhesion assembly; and ruffle assembly. Predicted to act upstream of or within fibroblast migration and phosphatidylinositol biosynthetic process. Predicted to be located in several cellular components, including lamellipodium; nuclear speck; and ruffle membrane. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex. Predicted to be active in plasma membrane. Orthologous to human PIP5K1A (phosphatidylinositol-4-phosphate 5-kinase type 1 alpha); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; phosphoinositide metabolic pathway; INTERACTS WITH 4,4'-sulfonyldiphenol; acrylamide; allethrin.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

68 kDa type I phosphatidylinositol 4-phosphate 5-kinase; LOC365865; phosphatidylinositol 4-phosphate 5-kinase type I alpha; phosphatidylinositol 4-phosphate 5-kinase type-1 alpha; phosphatidylinositol-4-phosphate 5-kinase type-1 alpha; phosphatidylinositol-4-phosphate 5-kinase, type 1 beta; phosphatidylinositol-4-phosphate 5-kinase, type I, alpha; PIP5K1-alpha; Pip5k1b; PIP5KIalpha; ptdIns(4)P-5-kinase 1 alpha

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	185,317,319 - 185,361,859 (-)	NCBI		GRCr8
mRatBN7.2	2	182,628,299 - 182,671,584 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	182,628,300 - 182,671,598 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	190,292,988 - 190,336,170 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	188,089,077 - 188,132,194 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	182,925,465 - 182,968,650 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	196,227,669 - 196,270,949 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	196,227,670 - 196,270,826 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	215,722,370 - 215,765,396 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	189,962,527 - 190,005,684 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	189,923,204 - 189,966,433 (-)	NCBI
Celera	2	175,165,145 - 175,208,290 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	autosomal dominant intellectual developmental disorder 60 with seizures		ISO	PIP5K1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual developmental disorder 60 with seizures	ClinVar	PMID:25741868
Pip5k1a	Rat	Dravet syndrome		ISO	PIP5K1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Severe myoclonic epilepsy in infancy	ClinVar	PMID:28492532
Pip5k1a	Rat	gastrointestinal stromal tumor		ISO	PIP5K1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:28492532
Pip5k1a	Rat	immunodeficiency 42		ISO	PIP5K1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency	ClinVar	PMID:28492532
Pip5k1a	Rat	MHC class II deficiency		ISO	PIP5K1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: MHC class II deficiency	ClinVar	PMID:28492532
Pip5k1a	Rat	parathyroid carcinoma		ISO	PIP5K1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Parathyroid carcinoma	ClinVar	PMID:28492532
Pip5k1a	Rat	severe congenital neutropenia 3		ISO	PIP5K1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Kostmann syndrome	ClinVar	PMID:28492532
Pip5k1a	Rat	severe congenital neutropenia 5		ISO	PIP5K1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital neutropenia-myelofibrosis-nephromegaly syndrome	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	Experimental Neoplasms		ISO	PIP5K1A (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:34755307
Pip5k1a	Rat	Lymphatic Metastasis		ISO	PIP5K1A (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:34755307
Pip5k1a	Rat	Neoplasm Invasiveness		ISO	PIP5K1A (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:34755307
Pip5k1a	Rat	urinary bladder cancer		ISO	PIP5K1A (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:34755307

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	1,2-dimethylhydrazine	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in increased expression of PIP5K1A mRNA	CTD	PMID:22206623
Pip5k1a	Rat	1-octadec-9-enoylglycero-3-phosphate	multiple interactions	ISO	Pip5k1a (Mus musculus)	6480464	1-Butanol inhibits the reaction [lysophosphatidic acid results in increased activity of PIP5K1A protein] and DGKA protein promotes the reaction [lysophosphatidic acid results in increased activity of PIP5K1A protein]	CTD	PMID:10913605
Pip5k1a	Rat	1-octadec-9-enoylglycero-3-phosphate	increases activity	ISO	Pip5k1a (Mus musculus)	6480464	lysophosphatidic acid results in increased activity of PIP5K1A protein	CTD	PMID:10913605
Pip5k1a	Rat	17beta-estradiol	multiple interactions	ISO	PIP5K1A (Homo sapiens)	6480464	ESR1 protein affects the reaction [Estradiol results in increased expression of PIP5K1A mRNA]	CTD	PMID:15223131
Pip5k1a	Rat	17beta-estradiol	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Estradiol results in increased expression of PIP5K1A mRNA	CTD	PMID:15223131 and PMID:19167446
Pip5k1a	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Pip5k1a (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of PIP5K1A mRNA	CTD	PMID:21570461
Pip5k1a	Rat	2-hydroxypropanoic acid	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Lactic Acid results in increased expression of PIP5K1A mRNA	CTD	PMID:30851411
Pip5k1a	Rat	3,4-methylenedioxymethamphetamine	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of PIP5K1A mRNA	CTD	PMID:26251327
Pip5k1a	Rat	3,4-methylenedioxymethamphetamine	increases methylation	ISO	Pip5k1a (Mus musculus)	6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in increased methylation of PIP5K1A promoter	CTD	PMID:26251327
Pip5k1a	Rat	4,4'-sulfonyldiphenol	multiple interactions	EXP		6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of PIP5K1A mRNA	CTD	PMID:36041667
Pip5k1a	Rat	5-azacytidine	decreases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Azacitidine results in decreased expression of PIP5K1A mRNA	CTD	PMID:19194470
Pip5k1a	Rat	acrylamide	decreases expression	EXP		6480464	Acrylamide results in decreased expression of PIP5K1A mRNA	CTD	PMID:28959563
Pip5k1a	Rat	allethrin	multiple interactions	EXP		6480464	[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of PIP5K1A protein	CTD	PMID:34896426
Pip5k1a	Rat	amiodarone	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Amiodarone results in increased expression of PIP5K1A mRNA	CTD	PMID:19774075
Pip5k1a	Rat	arsane	affects methylation	ISO	PIP5K1A (Homo sapiens)	6480464	Arsenic affects the methylation of PIP5K1A gene	CTD	PMID:25304211
Pip5k1a	Rat	arsane	multiple interactions	ISO	PIP5K1A (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PIP5K1A mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of PIP5K1A mRNA	CTD	PMID:39836092
Pip5k1a	Rat	arsenic atom	affects methylation	ISO	PIP5K1A (Homo sapiens)	6480464	Arsenic affects the methylation of PIP5K1A gene	CTD	PMID:25304211
Pip5k1a	Rat	arsenic atom	multiple interactions	ISO	PIP5K1A (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PIP5K1A mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of PIP5K1A mRNA	CTD	PMID:39836092
Pip5k1a	Rat	benzo[a]pyrene	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of PIP5K1A mRNA	CTD	PMID:27195522
Pip5k1a	Rat	benzo[a]pyrene	increases methylation	ISO	PIP5K1A (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of PIP5K1A 5' UTR	CTD	PMID:27901495
Pip5k1a	Rat	benzo[a]pyrene	affects methylation	ISO	PIP5K1A (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of PIP5K1A promoter	CTD	PMID:27901495
Pip5k1a	Rat	Benzo[ghi]perylene	decreases expression	ISO	Pip5k1a (Mus musculus)	6480464	1 and 12-benzoperylene results in decreased expression of PIP5K1A mRNA	CTD	PMID:26377693
Pip5k1a	Rat	beta-lapachone	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	beta-lapachone results in increased expression of PIP5K1A mRNA	CTD	PMID:38218311
Pip5k1a	Rat	bis(2-ethylhexyl) phthalate	multiple interactions	EXP		6480464	[Diethylhexyl Phthalate co-treated with Genistein] results in increased expression of PIP5K1A mRNA	CTD	PMID:32533902
Pip5k1a	Rat	bisphenol A	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	bisphenol A results in increased expression of PIP5K1A mRNA	CTD	PMID:15223131
Pip5k1a	Rat	bisphenol A	multiple interactions	EXP		6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of PIP5K1A mRNA	CTD	PMID:36041667
Pip5k1a	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of PIP5K1A mRNA	CTD	PMID:30816183 more ...
Pip5k1a	Rat	bisphenol A	affects expression	EXP		6480464	bisphenol A affects the expression of PIP5K1A mRNA	CTD	PMID:25181051
Pip5k1a	Rat	bisphenol A	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	bisphenol A results in increased expression of PIP5K1A mRNA	CTD	PMID:26063408
Pip5k1a	Rat	bisphenol A	multiple interactions	ISO	PIP5K1A (Homo sapiens)	6480464	ESR1 protein affects the reaction [bisphenol A results in increased expression of PIP5K1A mRNA]	CTD	PMID:15223131
Pip5k1a	Rat	bisphenol F	multiple interactions	EXP		6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of PIP5K1A mRNA	CTD	PMID:36041667
Pip5k1a	Rat	bortezomib	decreases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Bortezomib results in decreased expression of PIP5K1A mRNA	CTD	PMID:20977926
Pip5k1a	Rat	butan-1-ol	multiple interactions	ISO	Pip5k1a (Mus musculus)	6480464	1-Butanol inhibits the reaction [lysophosphatidic acid results in increased activity of PIP5K1A protein]	CTD	PMID:10913605
Pip5k1a	Rat	C60 fullerene	decreases expression	EXP		6480464	fullerene C60 results in decreased expression of PIP5K1A mRNA	CTD	PMID:19167457
Pip5k1a	Rat	cadmium dichloride	multiple interactions	ISO	Pip5k1a (Mus musculus)	6480464	Cadmium Chloride deficiency affects the reaction [Cadmium Chloride results in increased expression of PIP5K1A mRNA]	CTD	PMID:29408670
Pip5k1a	Rat	cadmium dichloride	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	Cadmium Chloride results in increased expression of PIP5K1A mRNA	CTD	PMID:29408670
Pip5k1a	Rat	caffeine	affects phosphorylation	ISO	PIP5K1A (Homo sapiens)	6480464	Caffeine affects the phosphorylation of PIP5K1A protein	CTD	PMID:35688186
Pip5k1a	Rat	carbon nanotube	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	Nanotubes more ...	CTD	PMID:25554681 and PMID:25620056
Pip5k1a	Rat	chlordecone	decreases expression	ISO	Pip5k1a (Mus musculus)	6480464	Chlordecone results in decreased expression of PIP5K1A mRNA	CTD	PMID:29980752
Pip5k1a	Rat	chlorpyrifos	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	Chlorpyrifos results in increased expression of PIP5K1A mRNA	CTD	PMID:37019170
Pip5k1a	Rat	cobalt dichloride	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	cobaltous chloride results in increased expression of PIP5K1A mRNA	CTD	PMID:19320972 and PMID:19376846
Pip5k1a	Rat	copper(II) sulfate	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Copper Sulfate results in increased expression of PIP5K1A mRNA	CTD	PMID:19549813
Pip5k1a	Rat	coumestrol	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Coumestrol results in increased expression of PIP5K1A mRNA	CTD	PMID:19167446
Pip5k1a	Rat	cyclosporin A	decreases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Cyclosporine results in decreased expression of PIP5K1A mRNA	CTD	PMID:25562108
Pip5k1a	Rat	cyhalothrin	multiple interactions	EXP		6480464	[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of PIP5K1A protein	CTD	PMID:34896426
Pip5k1a	Rat	cypermethrin	multiple interactions	EXP		6480464	[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of PIP5K1A protein	CTD	PMID:34896426
Pip5k1a	Rat	dibutyl phthalate	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	Dibutyl Phthalate results in increased expression of PIP5K1A mRNA	CTD	PMID:21266533
Pip5k1a	Rat	diethylstilbestrol	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Diethylstilbestrol results in increased expression of PIP5K1A mRNA	CTD	PMID:36621641
Pip5k1a	Rat	doxorubicin	decreases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Doxorubicin results in decreased expression of PIP5K1A mRNA	CTD	PMID:29803840
Pip5k1a	Rat	fenvalerate	multiple interactions	EXP		6480464	[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of PIP5K1A protein	CTD	PMID:34896426
Pip5k1a	Rat	folic acid	decreases expression	ISO	Pip5k1a (Mus musculus)	6480464	Folic Acid results in decreased expression of PIP5K1A mRNA	CTD	PMID:25629700
Pip5k1a	Rat	FR900359	decreases phosphorylation	ISO	PIP5K1A (Homo sapiens)	6480464	FR900359 results in decreased phosphorylation of PIP5K1A protein	CTD	PMID:37730182
Pip5k1a	Rat	genistein	multiple interactions	EXP		6480464	[Diethylhexyl Phthalate co-treated with Genistein] results in increased expression of PIP5K1A mRNA	CTD	PMID:32533902
Pip5k1a	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of PIP5K1A mRNA	CTD	PMID:22061828
Pip5k1a	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of PIP5K1A mRNA	CTD	PMID:33387578
Pip5k1a	Rat	graphene oxide	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	graphene oxide results in increased expression of PIP5K1A mRNA	CTD	PMID:33227293
Pip5k1a	Rat	inulin	multiple interactions	ISO	Pip5k1a (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of PIP5K1A mRNA	CTD	PMID:36331819
Pip5k1a	Rat	ketoconazole	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Ketoconazole results in increased expression of PIP5K1A mRNA	CTD	PMID:36621641
Pip5k1a	Rat	manganese atom	multiple interactions	ISO	PIP5K1A (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PIP5K1A mRNA	CTD	PMID:39836092
Pip5k1a	Rat	manganese(0)	multiple interactions	ISO	PIP5K1A (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PIP5K1A mRNA	CTD	PMID:39836092
Pip5k1a	Rat	manganese(II) chloride	multiple interactions	ISO	PIP5K1A (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PIP5K1A mRNA	CTD	PMID:39836092
Pip5k1a	Rat	methamphetamine	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	Methamphetamine results in increased expression of PIP5K1A mRNA	CTD	PMID:26307267
Pip5k1a	Rat	methidathion	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	methidathion results in increased expression of PIP5K1A mRNA	CTD	PMID:34813904
Pip5k1a	Rat	paracetamol	affects expression	ISO	Pip5k1a (Mus musculus)	6480464	Acetaminophen affects the expression of PIP5K1A mRNA	CTD	PMID:17562736
Pip5k1a	Rat	perfluorooctane-1-sulfonic acid	multiple interactions	ISO	Pip5k1a (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of PIP5K1A mRNA and [perfluorooctane sulfonic acid co-treated with Pectins] results in decreased expression of PIP5K1A mRNA	CTD	PMID:36331819
Pip5k1a	Rat	propiconazole	decreases expression	ISO	Pip5k1a (Mus musculus)	6480464	propiconazole results in decreased expression of PIP5K1A mRNA	CTD	PMID:21278054
Pip5k1a	Rat	pyrethrins	decreases expression	EXP		6480464	Pyrethrins results in decreased expression of PIP5K1A protein	CTD	PMID:34896426
Pip5k1a	Rat	rac-lactic acid	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Lactic Acid results in increased expression of PIP5K1A mRNA	CTD	PMID:30851411
Pip5k1a	Rat	silicon dioxide	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Silicon Dioxide analog results in increased expression of PIP5K1A mRNA	CTD	PMID:23806026
Pip5k1a	Rat	silicon dioxide	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	Silicon Dioxide results in increased expression of PIP5K1A mRNA	CTD	PMID:33720480
Pip5k1a	Rat	silver atom	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Silver results in increased expression of PIP5K1A mRNA	CTD	PMID:26014281
Pip5k1a	Rat	silver(0)	increases expression	ISO	PIP5K1A (Homo sapiens)	6480464	Silver results in increased expression of PIP5K1A mRNA	CTD	PMID:26014281
Pip5k1a	Rat	sodium arsenite	multiple interactions	ISO	PIP5K1A (Homo sapiens)	6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PIP5K1A mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of PIP5K1A mRNA	CTD	PMID:39836092
Pip5k1a	Rat	sodium arsenite	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	sodium arsenite results in increased expression of PIP5K1A mRNA	CTD	PMID:36209798
Pip5k1a	Rat	tetracycline	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	Tetracycline results in increased expression of PIP5K1A mRNA	CTD	PMID:16917069
Pip5k1a	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of PIP5K1A mRNA	CTD	PMID:34492290
Pip5k1a	Rat	titanium dioxide	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	titanium dioxide results in increased expression of PIP5K1A mRNA	CTD	PMID:23557971
Pip5k1a	Rat	titanium dioxide	decreases methylation	ISO	Pip5k1a (Mus musculus)	6480464	titanium dioxide results in decreased methylation of PIP5K1A gene and titanium dioxide results in decreased methylation of PIP5K1A promoter alternative form	CTD	PMID:35295148
Pip5k1a	Rat	triptonide	increases expression	ISO	Pip5k1a (Mus musculus)	6480464	triptonide results in increased expression of PIP5K1A mRNA	CTD	PMID:33045310
Pip5k1a	Rat	trovafloxacin	multiple interactions	ISO	Pip5k1a (Mus musculus)	6480464	[trovafloxacin co-treated with lipopolysaccharide and E coli O55-B5] results in increased expression of PIP5K1A mRNA	CTD	PMID:18930950
Pip5k1a	Rat	vinclozolin	affects expression	EXP		6480464	vinclozolin affects the expression of PIP5K1A mRNA	CTD	PMID:19015723

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	actin cytoskeleton organization	involved_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:20660631	RGD	PMID:20660631
Pip5k1a	Rat	actin cytoskeleton organization	involved_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	activation of GTPase activity	involved_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:20660631	RGD	PMID:20660631
Pip5k1a	Rat	cell chemotaxis	involved_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:20660631	RGD	PMID:20660631
Pip5k1a	Rat	cell chemotaxis	involved_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	fibroblast migration	acts_upstream_of_or_within	ISO	Pip5k1a (Mus musculus)	1624291	PMID:15870270	RGD	PMID:15870270
Pip5k1a	Rat	fibroblast migration	acts_upstream_of_or_within	IEA	UniProtKB:P70182 and ensembl:ENSMUSP00000102852	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	focal adhesion assembly	involved_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	focal adhesion assembly	involved_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:20660631	RGD	PMID:20660631
Pip5k1a	Rat	lipid metabolic process	involved_in	IEA	UniProtKB-KW:KW-0443	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	phosphatidylinositol biosynthetic process	acts_upstream_of_or_within	ISO	Pip5k1a (Mus musculus)	1624291	MGI:1298224 PMID:20622009	RGD	PMID:20622009
Pip5k1a	Rat	phosphatidylinositol biosynthetic process	acts_upstream_of_or_within	IEA	UniProtKB:P70182 and ensembl:ENSMUSP00000102852	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	phosphatidylinositol metabolic process	involved_in	IEA	UniRule:UR000400519	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Pip5k1a	Rat	phosphatidylinositol metabolic process	acts_upstream_of_or_within	IEA	UniProtKB:P70182 and ensembl:ENSMUSP00000102852	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	phosphatidylinositol metabolic process	acts_upstream_of_or_within	ISO	Pip5k1a (Mus musculus)	1624291	PMID:8798574	RGD	PMID:8798574
Pip5k1a	Rat	phosphatidylinositol metabolic process	involved_in	IEA	InterPro:IPR002498	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Pip5k1a	Rat	phosphatidylinositol phosphate biosynthetic process	involved_in	IBA	FB:FBgn0039924 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pip5k1a	Rat	phospholipid biosynthetic process	involved_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:15157668	RGD	PMID:15157668
Pip5k1a	Rat	phospholipid biosynthetic process	involved_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	protein localization to plasma membrane	involved_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	protein localization to plasma membrane	involved_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:20660631	RGD	PMID:20660631
Pip5k1a	Rat	ruffle assembly	involved_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	ruffle assembly	involved_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:20660631	RGD	PMID:20660631

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	cell projection	located_in	IEA	UniProtKB-KW:KW-0966	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Pip5k1a	Rat	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	cytosol	located_in	IEA	UniProtKB:P70182 and ensembl:ENSMUSP00000102852	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	cytosol	located_in	ISO	PIP5K1A (Homo sapiens) more ...	1624291		RGD	GO_REF:0000052
Pip5k1a	Rat	cytosol	located_in	ISO	Pip5k1a (Mus musculus)	1624291	PMID:20622009	RGD	PMID:20622009
Pip5k1a	Rat	cytosol	located_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	lamellipodium	located_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:15157668	RGD	PMID:15157668
Pip5k1a	Rat	lamellipodium	located_in	IEA	UniProtKB-SubCell:SL-0291	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Pip5k1a	Rat	lamellipodium	located_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	mRNA cleavage and polyadenylation specificity factor complex	located_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:18305108	RGD	PMID:18305108
Pip5k1a	Rat	mRNA cleavage and polyadenylation specificity factor complex	located_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	nuclear speck	located_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	nuclear speck	located_in	IEA	UniProtKB-SubCell:SL-0186	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Pip5k1a	Rat	nuclear speck	located_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:18288197	RGD	PMID:18288197
Pip5k1a	Rat	nucleoplasm	located_in	ISO	PIP5K1A (Homo sapiens) more ...	1624291		RGD	GO_REF:0000052
Pip5k1a	Rat	nucleoplasm	located_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	nucleus	located_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:15157668	RGD	PMID:15157668
Pip5k1a	Rat	nucleus	located_in	IEA	UniProtKB:P70182 and ensembl:ENSMUSP00000102852	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Pip5k1a	Rat	nucleus	located_in	ISO	Pip5k1a (Mus musculus)	1624291	PMID:15870270	RGD	PMID:15870270
Pip5k1a	Rat	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	nucleus	located_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	plasma membrane	located_in	ISO	PIP5K1A (Homo sapiens) more ...	1624291		RGD	GO_REF:0000052
Pip5k1a	Rat	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Pip5k1a	Rat	plasma membrane	located_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	plasma membrane	is_active_in	IBA	CGD:CAL0000192511 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pip5k1a	Rat	plasma membrane	located_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:20660631	RGD	PMID:20660631
Pip5k1a	Rat	ruffle	located_in	IEA	UniProtKB-SubCell:SL-0300	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Pip5k1a	Rat	ruffle membrane	located_in	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:20660631	RGD	PMID:20660631
Pip5k1a	Rat	ruffle membrane	located_in	ISO	Pip5k1a (Mus musculus)	1624291	PMID:15870270	RGD	PMID:15870270
Pip5k1a	Rat	ruffle membrane	located_in	IEA	UniProtKB:P70182 and ensembl:ENSMUSP00000102852	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	ruffle membrane	located_in	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	ISS	UniProtKB:Q99755	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	IEA	EC:2.7.1.68	1600115	GO_REF:0000003	UniProt	GO_REF:0000003
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	IBA	CGD:CAL0000192511 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	ISO	Pip5k1a (Mus musculus)	1624291	MGI:1298224 PMID:20622009 more ...	RGD	PMID:20622009 more ...
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	IEA	RHEA:14425	1600115	GO_REF:0000116	RHEA	GO_REF:0000116
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:15157668 more ...	RGD	PMID:15157668 more ...
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	IEA	UniProtKB:P70182 and ensembl:ENSMUSP00000102852	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	1-phosphatidylinositol-4-phosphate 5-kinase activity	enables	ISS	UniProtKB:P70182	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Pip5k1a	Rat	ATP binding	enables	IEA	UniRule:UR000400519	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Pip5k1a	Rat	ATP binding	enables	IEA	UniProtKB-KW:KW-0067	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	kinase activity	enables	IEA	UniRule:UR000400519	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Pip5k1a	Rat	kinase activity	enables	IEA	UniProtKB-KW:KW-0418	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	kinase binding	enables	ISO	PIP5K1A (Homo sapiens)	1624291	PMID:15157668	RGD	PMID:15157668
Pip5k1a	Rat	kinase binding	enables	IEA	UniProtKB:Q99755 and ensembl:ENSP00000357883	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pip5k1a	Rat	nucleotide binding	enables	IEA	UniRule:UR000400519	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Pip5k1a	Rat	nucleotide binding	enables	IEA	UniProtKB-KW:KW-0547	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	phosphatidylinositol kinase activity	enables	IEA	InterPro:IPR002498	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Pip5k1a	Rat	protein binding	enables	IPI	UniProtKB:O08560	13792527	PMID:15157668	UniProt
Pip5k1a	Rat	protein binding	enables	ISO	Pip5k1a (Mus musculus)	1624291	PR:Q6U7H8 more ...	RGD	PMID:14701839 and PMID:15870270
Pip5k1a	Rat	protein binding	enables	ISO	PIP5K1A (Homo sapiens) and UniProtKB:Q99755-1	1624291	UniProtKB:Q9H6E5 and PMID:18288197	RGD	PMID:18288197
Pip5k1a	Rat	protein binding	enables	ISO	PIP5K1A (Homo sapiens)	1624291	UniProtKB:P01116 more ...	RGD	PMID:15157668 more ...
Pip5k1a	Rat	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pip5k1a	Rat	transferase activity	enables	IEA	UniRule:UR000400519	1600115	GO_REF:0000104	UniProt	GO_REF:0000104

Imported Annotations - SMPDB

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	phosphoinositide metabolic pathway		ISO	PIP5K1A (Homo sapiens)	10402751		SMPDB	SMP:00463

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	endocytosis pathway		IEA		6907045		KEGG	rno:04144
Pip5k1a	Rat	Fc gamma receptor mediated signaling pathway		IEA		6907045		KEGG	rno:04666
Pip5k1a	Rat	inositol phosphate metabolic pathway		IEA		6907045		KEGG	rno:00562
Pip5k1a	Rat	phosphatidylinositol 3-kinase signaling pathway		IEA		6907045		KEGG	rno:04070

Imported Annotations - PID (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pip5k1a	Rat	Arf family mediated signaling pathway		ISO	PIP5K1A (Homo sapiens)	6484113		PID	PID:200195
Pip5k1a	Rat	E-cadherin signaling pathway		ISO	PIP5K1A (Homo sapiens)	6484113		PID	PID:200147

BioCyc Pathways

3-phosphoinositide biosynthesis	D-myo-inositol (1,4,5)-trisphosphate biosynthesis

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Diacylglycerol kinase zeta regulates phosphatidylinositol 4-phosphate 5-kinase Ialpha by a novel mechanism.	Luo B, etal., Cell Signal. 2004 Aug;16(8):891-7. doi: 10.1016/j.cellsig.2004.01.010.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
6.	SMPDB Annotation Import Pipeline	Pipeline to import SMPDB annotations from SMPDB into RGD
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8798574	PMID:15870270	PMID:18288197	PMID:18305108	PMID:20622009	PMID:20660631	PMID:21423176	PMID:27739494	PMID:32686865

Pip5k1a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	185,317,319 - 185,361,859 (-)	NCBI		GRCr8
mRatBN7.2	2	182,628,299 - 182,671,584 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	182,628,300 - 182,671,598 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	190,292,988 - 190,336,170 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	188,089,077 - 188,132,194 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	182,925,465 - 182,968,650 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	196,227,669 - 196,270,949 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	196,227,670 - 196,270,826 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	215,722,370 - 215,765,396 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	189,962,527 - 190,005,684 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	189,923,204 - 189,966,433 (-)	NCBI
Celera	2	175,165,145 - 175,208,290 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

PIP5K1A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	151,195,419 - 151,249,531 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	151,197,949 - 151,249,536 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	151,171,028 - 151,222,007 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	149,437,696 - 149,488,629 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	147,984,144 - 148,035,078	NCBI
Celera	1	124,286,312 - 124,337,297 (+)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	122,549,129 - 122,599,938 (+)	NCBI		HuRef
CHM1_1	1	152,566,349 - 152,617,334 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	150,319,124 - 150,373,243 (+)	NCBI		T2T-CHM13v2.0

Pip5k1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	94,965,841 - 95,014,241 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	94,965,841 - 95,014,241 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	95,058,530 - 95,106,930 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	95,058,530 - 95,106,930 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	94,863,517 - 94,910,780 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	95,144,999 - 95,192,262 (-)	NCBI		MGSCv36	mm8
Celera	3	96,490,835 - 96,538,184 (-)	NCBI		Celera
Cytogenetic Map	3	F2.1	NCBI
cM Map	3	40.74	NCBI

Pip5k1a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955588	555,821 - 605,723 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955588	555,818 - 605,459 (+)	NCBI	ChiLan1.0	ChiLan1.0

PIP5K1A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	98,584,132 - 98,635,394 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	98,335,345 - 98,386,612 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	126,547,793 - 126,598,618 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	130,195,974 - 130,246,198 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	130,195,974 - 130,246,198 (+)	Ensembl	panpan1.1		panPan2

PIP5K1A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	60,257,017 - 60,295,866 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	60,257,332 - 60,295,866 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	59,700,905 - 59,739,406 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	61,273,137 - 61,312,006 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	61,273,153 - 61,312,003 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	60,102,170 - 60,140,685 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	60,187,481 - 60,226,180 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	60,915,268 - 60,954,258 (+)	NCBI		UU_Cfam_GSD_1.0

Pip5k1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	22,369,145 - 22,417,998 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	1,399,954 - 1,446,769 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	1,399,492 - 1,448,398 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PIP5K1A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	98,012,945 - 98,056,815 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	98,012,941 - 98,062,166 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	107,265,724 - 107,314,945 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PIP5K1A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	12,439,726 - 12,490,331 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	12,017,486 - 12,069,455 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pip5k1a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	18,616,121 - 18,658,286 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624772	18,616,095 - 18,658,016 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Pip5k1a
184 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	225
Count of miRNA genes:	148
Interacting mature miRNAs:	187
Transcripts:	ENSRNOT00000028609
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	114837527	211674221	Rat
1358356	Srcrt1	Stress Responsive Cort QTL1	3.66		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	2	161699179	222436696	Rat
1331734	Bp204	Blood pressure QTL 204	3.61192		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	168358098	223265385	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	18960362	228801039	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	136445150	202447032	Rat
152025245	Scl81	Serum cholesterol level QTL 81	3.49		blood cholesterol amount (VT:0000180)		2	122609194	206936711	Rat
70162	Bp63	Blood pressure QTL 63	5.64		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	2	169745596	214745596	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	114837675	212549332	Rat
12879836	Kidm61	Kidney mass QTL 61		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	152413072	185122374	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
10043136	Iddm54	Insulin dependent diabetes mellitus QTL 54	3.4	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	143657411	190602963	Rat
12879837	Am2	Aortic mass QTL 2		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	152413072	185122374	Rat
12879838	Cm86	Cardiac mass QTL 86		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	152413072	185122374	Rat
1302793	Bw16	Body weight QTL 16	5	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	2	157142209	202446871	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
12879839	Cm85	Cardiac mass QTL 85		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	152413072	185122374	Rat
61469	Bp16	Blood pressure QTL 16	5.64		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	2	169745596	214745596	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	2	135552573	202446871	Rat
1549833	Bp257	Blood pressure QTL 257		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	168354880	185122374	Rat
1358900	Bw48	Body weight QTL 48	4.88		body mass (VT:0001259)	body weight (CMO:0000012)	2	157142078	211086598	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	114837527	185876470	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
12879840	Bw179	Body weight QTL 179		0.005	body mass (VT:0001259)	body weight (CMO:0000012)	2	152413072	185122374	Rat
1581502	Esta3	Estrogen-induced thymic atrophy QTL 3			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	136916935	189599348	Rat
9589044	Scfw1	Subcutaneous fat weight QTL 1	5.8	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	2	182171407	227171407	Rat
8694435	Bw166	Body weight QTL 166	14.08	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	2	182171407	227171407	Rat
1359032	Hrtrt18	Heart rate QTL 18			heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	2	157142078	192625452	Rat
2301966	Bp322	Blood pressure QTL 322	3.58		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	150540301	202447032	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
8694194	Abfw1	Abdominal fat weight QTL 1	11.7	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	2	182171407	227171407	Rat
1359022	Ppulsi1	Prepulse inhibition QTL 1	3.63		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	2	136916935	213594495	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	149559561	249053267	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
2300189	Bmd48	Bone mineral density QTL 48	5.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	179335906	224335906	Rat
8662843	Vetf9	Vascular elastic tissue fragility QTL 9	2.05		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	157142078	226277316	Rat
631501	Bp101	Blood pressure QTL 101	2.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	150341684	202446871	Rat
2307174	Activ3	Activity QTL 3	4.83	0.000058	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	2	168594495	213594495	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	141194931	223265385	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	0.009	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	2	141596551	202447032	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	141194931	223265385	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	112456140	212696837	Rat
1598805	Memor8	Memory QTL 8	3		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	2	150341585	189039377	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	2	143157029	210020885	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	133914684	202447032	Rat
61401	Niddm2	Non-insulin dependent diabetes mellitus QTL 2	4.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	144599348	189599348	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	112456140	212696837	Rat
1641925	Alcrsp2	Alcohol response QTL 2			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	149559561	221167075	Rat
1354609	Niddm62	Non-insulin dependent diabetes mellitus QTL 62	4.72	0.000006	insulin secretion trait (VT:0003564)	plasma insulin level (CMO:0000342)	2	150540301	202447032	Rat
1598833	Bp295	Blood pressure QTL 295	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	147798556	192798556	Rat
61417	Cia10	Collagen induced arthritis QTL 10	3.4		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	2	179946951	224946951	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
631522	Bp74	Blood pressure QTL 74		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	172710921	184114403	Rat
8694383	Bw158	Body weight QTL 158	7.69	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	2	182171407	227171407	Rat
7488927	Bp365	Blood pressure QTL 365		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	162765032	207765032	Rat
1598838	Bp290	Blood pressure QTL 290	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	166539266	211539266	Rat
7488925	Bp364	Blood pressure QTL 364		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	160564068	205564068	Rat
2306901	Bp337	Blood pressure QTL 337		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	164073756	227146641	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
6903312	Bw112	Body weight QTL 112	3.2	0.0013	body mass (VT:0001259)	body weight (CMO:0000012)	2	143657569	184114274	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
2293084	Iddm26	Insulin dependent diabetes mellitus QTL 26	2.9		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	174930955	213594495	Rat

RH127674

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	182,628,385 - 182,628,565 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	196,227,756 - 196,227,935	NCBI	Rnor6.0
Rnor_5.0	2	215,722,457 - 215,722,636	UniSTS	Rnor5.0
RGSC_v3.4	2	189,962,614 - 189,962,793	UniSTS	RGSC3.4
Celera	2	175,165,232 - 175,165,411	UniSTS
RH 3.4 Map	2	1199.0	UniSTS
Cytogenetic Map	2	q34	UniSTS

RH143262

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	182,664,652 - 182,664,805 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	196,264,019 - 196,264,171	NCBI	Rnor6.0
Rnor_5.0	2	215,758,447 - 215,758,599	UniSTS	Rnor5.0
RGSC_v3.4	2	189,998,877 - 189,999,029	UniSTS	RGSC3.4
Celera	2	175,201,483 - 175,201,635	UniSTS
RH 3.4 Map	2	1193.11	UniSTS
Cytogenetic Map	2	q34	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001042621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761315	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102779	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC117098	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC130969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY724476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000028609 ⟹ ENSRNOP00000028609

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	182,628,300 - 182,671,477 (-)	Ensembl
Rnor_6.0 Ensembl	2	196,227,670 - 196,270,826 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113159 ⟹ ENSRNOP00000093572

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	182,633,245 - 182,647,835 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117151 ⟹ ENSRNOP00000097963

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	182,628,300 - 182,671,461 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119756 ⟹ ENSRNOP00000086696

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	182,628,300 - 182,671,598 (-)	Ensembl

RefSeq Acc Id:

NM_001042621 ⟹ NP_001036086

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	185,317,319 - 185,360,476 (-)	NCBI
mRatBN7.2	2	182,628,299 - 182,671,461 (-)	NCBI
Rnor_6.0	2	196,227,669 - 196,270,826 (-)	NCBI
Rnor_5.0	2	215,722,370 - 215,765,396 (-)	NCBI
RGSC_v3.4	2	189,962,527 - 190,005,684 (-)	RGD
Celera	2	175,165,145 - 175,208,290 (-)	RGD

Sequence:

show sequence

GGGGGACCTCAGGTGCCTGGGTTTTTCTTTAGGTTTGTTCTATCCGAGACGCGGGACCCCCGGGGCCCGGCTTGAGTGTTCCTGTCTAGTGAGAGAAGGTAGCTTTTGCGGAGAGCAGTTCAAGTTGC
TAGGAAGGTGCCAGACTGGATCTCTCCCCCATGCCGGGCAAGTGGTGCGGTCCTGAGCTTGTCCTGGAGCCTGAACAACGCCTGTGAGAAGCCCGCCGAACGCGGGTTCTGTGAAGAGACGTGGGGAA
GATTCGATTCCGAGAAAAGGAAAAGTCGGATTGAAAGGGAGTGAAGCCGCTGAGGGGGAGGGGGCTGCCAAGATGGCGTCCGCCTCCTCAGGGCCAGCGGCGGCGGGGTTTTCACCCCTTGATTCCGG
GGTCCCTGCCGGTACCGCAGCATCTGGAATCAAGAGAGGCACAGTATCTGAGGGACCTTATGCCTCTCTCATGCCTGTCAAGAAAATAGGCCATCGAAGTGTTGATTCCTCTGGAGAGACTACATACA
AAAAGACAACTTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGTATCACTCACACTGTGGGCAGCCTTAGCACCAAACCAGAGCGGGACGTCCTCATGCAAGACTTCTACGTGGTGGAGAGCATCTTC
TTCCCCAGTGAAGGCAGCAACCTGACACCGGCTCACCATTACAATGACTTTCGGTTCAAGACCTATGCACCTGTCGCCTTCCGTTACTTCAGAGAGCTATTTGGCATCCGGCCTGACGATTACTTGTA
CTCCCTTTGCAGTGAGCCATTGATTGAACTCTCCAATTCTGGAGCTAGCGGTTCCCTCTTCTACGTGTCCAGTGATGATGAATTCATCATTAAGACCGTCCAGCATAAAGAGGCAGAATTTCTGCAAA
AATTGCTTCCAGGATACTACATGAATCTTAACCAAAACCCTCGTACTTTGCTGCCCAAATTTTATGGACTGTACTGTGTGCAAGCAGGCGGCAAGAACATACGAATTGTGGTGATGAACAATCTCTTG
CCTCGGTCAGTCAAAATGCATATGAAATATGATCTCAAGGGTTCAACTTACAAGCGGCGGGCTTCTCAGAAAGAACGAGAGAAGACTCTCCCCACCTTTAAAGACCTGGACTTCCTACAAGATATCCC
CGATGGCCTTTTTTTAGATGCTGACATGTACAGTGCTCTATGTAAGACTCTGCAGCGTGACTGTCTGGTGCTGCAGAGCTTCAAGATTATGGACTATAGCCTGTTGATGTCCATCCACAACATGGATC
ATGCCCAGCGAGAGCCCATGAACAGCGAAACACAATACTCAGTTGACACTCGCAGACCAGCCCCGCAGAAGGCTCTCTATTCCACAGCTATGGAGTCCATCCAGGGCGAGGCTCGCCGGGGCGGCACT
GTGGAGACTGAGGACCACATGGGTGGCATCCCTGCCAGAAACAACAAAGGGGAAAGGCTCCTGCTTTACATTGGCATCATTGATATTCTGCAGTCCTACAGGTTTGTTAAGAAGTTGGAGCACTCTTG
GAAAGCCCTGGTCCATGATGGGGACACGGTGTCAGTACATCGTCCAGGCTTCTATGCTGAACGGTTCCAGCGCTTCATGTGCAACACAGTGTTCAAGAAGATTCCCTTGAAGCCTTCTCCTACCAAAA
AGTTTCGGTCTGGCCCATCTTTCTCTCGGCGATCAGGCCCCAGCGGCAACTCCTGCACTCCTTCCCAGCCGACAGCCTCTGGGGAACACAAAGCACAAGTGACTACGAAGGCGGAAGTGGAGCCAGAT
ATACACCTTGGGCGTCCTGATGTCTTACCTCAGACTCCACCGTTGGAGGAGATAAGTGAGGGTTCACCTGTTCCTGGTCCCAGTTTCTCACCTGCAGTTGGACAACCTTTGCAAATACTAAATTTGAG
TTCAACCTTGGAAAAGCTTGATGTTGCAGAGTCAGAACTCACCCATTGAGCAGCGAGCCTTGGAAGACCTGAGACAAGACTCCGCTATGGCTTTGATCCCAAGATGGCAGCCCTTGCCCCAGGAATGC
TGAGTCGTCTTCTCGGTCATCAACAGAGGAGAGAATGTGGAGCTAGCAGGGCTCTGTCTCTGTCTCCCCTTCCTCTGGGCAGTAGTGCCTTTGACAGTTGAGGACAACATCGTCCCCACCACTCCAGA
GTGGGTGGCATGAATTTTCCACTGCCTGCCATGGCTTCTATAGCTGACTATTTTCAAACCCCCATTCTTTGTGCTGGACGCGGGGTTGCTGGCCTAGGTGGTTTCCTCCTCTTTACCTTTCACCTGGA
GCTGGACTCTTAATCTCCTCAGGACAGACTGGCTGGACATTGCTCCTACCTTTGATCCTCCCGCTGGTCTTTGAGACTCCCAATGATTTTATGAAGGTGTTTGGGAGGAGAGTGAGGACGGTCCTTAC
TCCCAGGCTAGTTTTTTCCTTAAAAAAGGAAAGAAACACAAAGAGCACACAGTGTAAGTTTGAGCCAGTCTCAGATAAACGTTCTTGTATAGAAGAGCCCGAGTGTTCGTGAAGTAGAAAGGCTGGGG
CTGCCCCGCCAGCAGCTGCTCTCTGTCTCCCTCACTTAGGGCTGAGGGAGTAGACAGGGGCGTGGCTACACGTACCCTTTTTTAAAGACAGTGGGGCAGCCATGTTAGGAGAGTGGACCTTAGCAGGA
CCCTACTCACTGCCAGGTCATACAGTTACTACTTACTATTCTGCGATTTGGAATGTATCCTAATAGTTTTTCTAAATATAAAGAATTATCAAATGATTTTAGACCATTCTCCAAAGGAGATTTCTTTG
TTCTTCCTATATTTTCCAACAGTATTCTGCTCTTTGTGGAGCTACGGTGGAGGGAGATGTTTGTGTCTGTTTAACAGGCAGTCCGTATCTATGAGGCTAGAGAATATTTTCTTAAACTCCTGGGGAGC
CACAGACTTCCTTCTGTAAGGTTGTCGCCATGCCACCTGGCCTGCCCCTTCCTCTGTAGAGAAGCTGGAAACAGGGCCACGGAGCCCTCTCCTTCCTCTCAGTTACGGCCCATCTGGTCCTACGGTGG
GGCAGTGCATGGTGTTTGAGGCCAGCTGTGGAAATCCCACATTAGCTCCTTCTCCATCCCGTCTCACCCTGACAGCAGGTTAGCCAGCCCCACGTAACTGTCTATATTAGACGCCCCAGCCGGCTTCC
GGCTGCCTGTCTTTGCTGCCATGTTCTTTTTACAAGAAGGAAAGAAACAGTTTCTTGCTATTTTTTTTCATAATTTACTATTTATGATGTATTTAAGTGTTTTATTCAGGACAGAGTTCTGTAAGGGG
TGGGAGGGAGTATTTGAGGGAGGGCTGGGGACTTAGAGAGGACATGGGATTCAGCATTTTTATGGAGTGTTACTATTTGCCTCTACTTTGTATTGTTGAGAAATGACAAATGCAGTATAAATAATAAA
TATCTGGTTTTACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008761315 ⟹ XP_008759537

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	185,317,319 - 185,361,859 (-)	NCBI
mRatBN7.2	2	182,628,299 - 182,671,584 (-)	NCBI
Rnor_6.0	2	196,227,669 - 196,270,949 (-)	NCBI

Sequence:

show sequence

CGAGAAGGTGGTGCGCATGCGCAACACCGGGGTTTCCTTGGCCGCCCACCCTGAACGAAGCTGT
GGAGTTGGGGATAAACAGGCAGTGGCTGGGGAGGAGAGGGAGGGGGGCATTCGCTTTTTGGGGGACCTCAGGTGCCTGGGTTTTTCTTTAGGTTTGTTCTATCCGAGACGCGGGACCCCCGGGGCCCG
GCTTGAGTGTTCCTGTCTAGTGAGAGAAGGTAGCTTTTGCGGAGAGCAGTTCAAGTTGCTAGGAAGGTGCCAGACTGGATCTCTCCCCCATGCCGGGCAAGTGGTGCGGTCCTGAGCTTGTCCTGGAG
CCTGAACAACGCCTGTGAGAAGCCCGCCGAACGCGGGTTCTGTGAAGAGACGTGGGGAAGATTCGATTCCGAGAAAAGGAAAAGTCGGATTGAAAGGGAGTGAAGCCGCTGAGGGGGAGGGGGCTGCC
AAGATGGCGTCCGCCTCCTCAGGGCCAGCGGCGGCGGGGTTTTCACCCCTTGATTCCGGGGTCCCTGCCGGTACCGCAGCAGCAGCATCTGGAATCAAGAGAGGCACAGTATCTGAGGGACCTTATGC
CTCTCTCATGCCTGTCAAGAAAATAGGCCATCGAAGTGTTGATTCCTCTGGAGAGACTACATACAAAAAGACAACTTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGTATCACTCACACTGTGGGCA
GCCTTAGCACCAAACCAGAGCGGGACGTCCTCATGCAAGACTTCTACGTGGTGGAGAGCATCTTCTTCCCCAGTGAAGGCAGCAACCTGACACCGGCTCACCATTACAATGACTTTCGGTTCAAGACC
TATGCACCTGTCGCCTTCCGTTACTTCAGAGAGCTATTTGGCATCCGGCCTGACGATTACTTGTACTCCCTTTGCAGTGAGCCATTGATTGAACTCTCCAATTCTGGAGCTAGCGGTTCCCTCTTCTA
CGTGTCCAGTGATGATGAATTCATCATTAAGACCGTCCAGCATAAAGAGGCAGAATTTCTGCAAAAATTGCTTCCAGGATACTACATGAATCTTAACCAAAACCCTCGTACTTTGCTGCCCAAATTTT
ATGGACTGTACTGTGTGCAAGCAGGCGGCAAGAACATACGAATTGTGGTGATGAACAATCTCTTGCCTCGGTCAGTCAAAATGCATATGAAATATGATCTCAAGGGTTCAACTTACAAGCGGCGGGCT
TCTCAGAAAGAACGAGAGAAGACTCTCCCCACCTTTAAAGACCTGGACTTCCTACAAGATATCCCCGATGGCCTTTTTTTAGATGCTGACATGTACAGTGCTCTATGTAAGACTCTGCAGCGTGACTG
TCTGGTGCTGCAGAGCTTCAAGATTATGGACTATAGCCTGTTGATGTCCATCCACAACATGGATCATGCCCAGCGAGAGCCCATGAACAGCGAAACACAATACTCAATTGACACTCGCAGACCAGCCC
CGCAGAAGGCTCTCTATTCCACAGCTATGGAGTCCATCCAGGGCGAGGCTCGCCGGGGCGGCACTGTGGAGACTGAGGACCACATGGGTGGCATCCCTGCCAGAAACAACAAAGGGGAAAGGCTCCTG
CTTTACATTGGCATCATTGATATTCTGCAGTCCTACAGGTTTGTTAAGAAGTTGGAGCACTCTTGGAAAGCCCTGGTCCATGATGGGGACACGGTGTCAGTACATCGTCCAGGCTTCTATGCTGAACG
GTTCCAGCGCTTCATGTGCAACACAGTGTTCAAGAAGATTCCCTTGAAGCCTTCTCCTACCAAAAAGTTTCGGTCTGGCCCATCTTTCTCTCGGCGATCAGGCCCCAGCGGCAACTCCTGCACTCCTT
CCCAGCCGACAGCCTCTGGGGAACACAAAGCACAAGTGACTACGAAGGCGGAAGTGGAGCCAGATATACACCTTGGGCGTCCTGATGTCTTACCTCAGACTCCACCGTTGGAGGAGATAAGTGAGGGT
TCACCTGTTCCTGGTCCCAGTTTCTCACCTGCAGTTGGACAACCTTTGCAAATACTAAATTTGAGTTCAACCTTGGAAAAGCTTGATGTTGCAGAGTCAGAACTCACCCATTGAGCAGCGAGCCTTGG
AAGACCTGAGACAAGACTCCGCTATGGCTTTGATCCCAAGATGGCAGCCCTTGCCCCAGGAATGCTGAGTCGTCTTCTCGGTCATCAACAGAGGAGAGAATGTGGAGCTAGCAGGGCTCTGTCTCTGT
CTCCCCTTCCTCTGGGCAGTAGTGCCTTTGACAGTTGAGGACAACATCGTCCCCACCACTCCAGAGTGGGTGGCATGAATTTTCCACTGCCTGCCATGGCTTCTATAGCTGACTATTTTCAAACCCCC
ATTCTTTGTGCTGGACGCGGGGTTGCTGGCCTAGGTGGTTTCCTCCTCTTTACCTTTCACCTGGAGCTGGACTCTTAATCTCCTCAGGACAGACTGGCTGGACATTGCTCCTACCTTCGATCCTCCCG
CTGGTCTTTGAGACTCCCAATGATTTTATGAAGGTGTTTGGGAGGAGAGTGAGGACGGTCCTTACTCCCAGGCTAGTTTTTTCCTTAAAAAAGGAAAGAAACACAAAGAGCACACAGTGTAAGTTTGA
GCCAGTCTCAGATAAACGTTCTTGTATAGAAGAGCCCGAGTGTTCGTGAAGTAGAAAGGCTGGGGCTGCCCCGCCAGCAGCTGCTCTCTGTCTCCCTCACTTAGGGCTGAGGGAGTAGACAGGGGCGT
GGCTACACGTACCCTTTTTTAAAGACAGTGGGGCAGCCATGTTAGGAGAGTGGACCTTAGCAGGACCCTACTCACTGCCAGGTCATACAGTTACTACTTACTATTCTGCGATTTGGAATGTATCCTAA
TAGTTTTTCTAAATATAAAGAATTATCAAATGATTTTAGACCATTCTCCAAAGGAGATTTCTTTGTTCTTCCTATATTTTCCAACAGTATTCTGCTCTTTGTGGAGCTACGGTGGAGGGAGATGTTTG
TGTCTGTTTAACAGGCAGTCCGTATCTATGAGGCTAGAGAATATTTTCTTAAACTCCTGGGGAGCCACAGACTTCCTTCTGTAAGGTTGTCGCCATGCCACCTGGCCTGCCCCTTCCTCTGTAGAGAA
GCTGGAAACAGGGCCACGGAGCCCTCTCCTTCCTCTCAGTTACGGCCCATCTGGTCCTACGGTGGGGCAGTGCATGGTGTTTGAGGCCAGCTGTGGAAATCCCACATTAGCTCCTTCTCCATCCCGTC
TCACCCTGACAGCAGGTTAGCCAGCCCCACGTAACTGTCTATATTAGACGCCCCAGCCGGCTTCCGGCTGCCTGTCTTTGCTGCCATGTTCTTTTTTACAAGAAGGAAAGAAACAGTTTCTTGCTATT
TTTTTTCATAATTTACTATTTATGATGTATTTAAGTGTTTTATTCAGGACAGAGTTCTGTAAGGGGTGGGAGGGAGTATTTGAGGGAGGGCTGGGGACTTAGAGAGGACATGGGATTCAGCATTTTTA
TGGAGTGTTACTATTTGCCTCTACTTTGTATTGTTGAGAAATGACAAATGCAGTATAAATAATAAATATCTGGTTTTACTGTA

hide sequence

RefSeq Acc Id:

XM_008761316 ⟹ XP_008759538

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	185,317,319 - 185,361,859 (-)	NCBI
mRatBN7.2	2	182,628,299 - 182,671,584 (-)	NCBI
Rnor_6.0	2	196,227,669 - 196,270,949 (-)	NCBI

Sequence:

show sequence

CGAGAAGGTGGTGCGCATGCGCAACACCGGGGTTTCCTTGGCCGCCCACCCTGAACGAAGCTGTGGAGTTGGGGATAAACAGGCAGTGGCTGGGGAGGAGAGGGAGGGGGGCATTCGCTTTTTGGGGG
ACCTCAGGTGCCTGGGTTTTTCTTTAGGTTTGTTCTATCCGAGACGCGGGACCCCCGGGGCCCGGCTTGAGTGTTCCTGTCTAGTGAGAGAAGGTAGCTTTTGCGGAGAGCAGTTCAAGTTGCTAGGA
AGGTGCCAGACTGGATCTCTCCCCCATGCCGGGCAAGTGGTGCGGTCCTGAGCTTGTCCTGGAGCCTGAACAACGCCTGTGAGAAGCCCGCCGAACGCGGGTTCTGTGAAGAGACGTGGGGAAGATTC
GATTCCGAGAAAAGGAAAAGTCGGATTGAAAGGGAGTGAAGCCGCTGAGGGGGAGGGGGCTGCCAAGATGGCGTCCGCCTCCTCAGGGCCAGCGGCGGCGGGGTTTTCACCCCTTGATTCCGGGGTCC
CTGCCGGTACCGCAGCAGCATCTGGAATCAAGAGAGGCACAGTATCTGAGGGACCTTATGCCTCTCTCATGCCTGTCAAGAAAATAGGCCATCGAAGTGTTGATTCCTCTGGAGAGACTACATACAAA
AAGACAACTTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGTATCACTCACACTGTGGGCAGCCTTAGCACCAAACCAGAGCGGGACGTCCTCATGCAAGACTTCTACGTGGTGGAGAGCATCTTCTT
CCCCAGTGAAGGCAGCAACCTGACACCGGCTCACCATTACAATGACTTTCGGTTCAAGACCTATGCACCTGTCGCCTTCCGTTACTTCAGAGAGCTATTTGGCATCCGGCCTGACGATTACTTGTACT
CCCTTTGCAGTGAGCCATTGATTGAACTCTCCAATTCTGGAGCTAGCGGTTCCCTCTTCTACGTGTCCAGTGATGATGAATTCATCATTAAGACCGTCCAGCATAAAGAGGCAGAATTTCTGCAAAAA
TTGCTTCCAGGATACTACATGAATCTTAACCAAAACCCTCGTACTTTGCTGCCCAAATTTTATGGACTGTACTGTGTGCAAGCAGGCGGCAAGAACATACGAATTGTGGTGATGAACAATCTCTTGCC
TCGGTCAGTCAAAATGCATATGAAATATGATCTCAAGGGTTCAACTTACAAGCGGCGGGCTTCTCAGAAAGAACGAGAGAAGACTCTCCCCACCTTTAAAGACCTGGACTTCCTACAAGATATCCCCG
ATGGCCTTTTTTTAGATGCTGACATGTACAGTGCTCTATGTAAGACTCTGCAGCGTGACTGTCTGGTGCTGCAGAGCTTCAAGATTATGGACTATAGCCTGTTGATGTCCATCCACAACATGGATCAT
GCCCAGCGAGAGCCCATGAACAGCGAAACACAATACTCAATTGACACTCGCAGACCAGCCCCGCAGAAGGCTCTCTATTCCACAGCTATGGAGTCCATCCAGGGCGAGGCTCGCCGGGGCGGCACTGT
GGAGACTGAGGACCACATGGGTGGCATCCCTGCCAGAAACAACAAAGGGGAAAGGCTCCTGCTTTACATTGGCATCATTGATATTCTGCAGTCCTACAGGTTTGTTAAGAAGTTGGAGCACTCTTGGA
AAGCCCTGGTCCATGATGGGGACACGGTGTCAGTACATCGTCCAGGCTTCTATGCTGAACGGTTCCAGCGCTTCATGTGCAACACAGTGTTCAAGAAGATTCCCTTGAAGCCTTCTCCTACCAAAAAG
TTTCGGTCTGGCCCATCTTTCTCTCGGCGATCAGGCCCCAGCGGCAACTCCTGCACTCCTTCCCAGCCGACAGCCTCTGGGGAACACAAAGCACAAGTGACTACGAAGGCGGAAGTGGAGCCAGATAT
ACACCTTGGGCGTCCTGATGTCTTACCTCAGACTCCACCGTTGGAGGAGATAAGTGAGGGTTCACCTGTTCCTGGTCCCAGTTTCTCACCTGCAGTTGGACAACCTTTGCAAATACTAAATTTGAGTT
CAACCTTGGAAAAGCTTGATGTTGCAGAGTCAGAACTCACCCATTGAGCAGCGAGCCTTGGAAGACCTGAGACAAGACTCCGCTATGGCTTTGATCCCAAGATGGCAGCCCTTGCCCCAGGAATGCTG
AGTCGTCTTCTCGGTCATCAACAGAGGAGAGAATGTGGAGCTAGCAGGGCTCTGTCTCTGTCTCCCCTTCCTCTGGGCAGTAGTGCCTTTGACAGTTGAGGACAACATCGTCCCCACCACTCCAGAGT
GGGTGGCATGAATTTTCCACTGCCTGCCATGGCTTCTATAGCTGACTATTTTCAAACCCCCATTCTTTGTGCTGGACGCGGGGTTGCTGGCCTAGGTGGTTTCCTCCTCTTTACCTTTCACCTGGAGC
TGGACTCTTAATCTCCTCAGGACAGACTGGCTGGACATTGCTCCTACCTTCGATCCTCCCGCTGGTCTTTGAGACTCCCAATGATTTTATGAAGGTGTTTGGGAGGAGAGTGAGGACGGTCCTTACTC
CCAGGCTAGTTTTTTCCTTAAAAAAGGAAAGAAACACAAAGAGCACACAGTGTAAGTTTGAGCCAGTCTCAGATAAACGTTCTTGTATAGAAGAGCCCGAGTGTTCGTGAAGTAGAAAGGCTGGGGCT
GCCCCGCCAGCAGCTGCTCTCTGTCTCCCTCACTTAGGGCTGAGGGAGTAGACAGGGGCGTGGCTACACGTACCCTTTTTTAAAGACAGTGGGGCAGCCATGTTAGGAGAGTGGACCTTAGCAGGACC
CTACTCACTGCCAGGTCATACAGTTACTACTTACTATTCTGCGATTTGGAATGTATCCTAATAGTTTTTCTAAATATAAAGAATTATCAAATGATTTTAGACCATTCTCCAAAGGAGATTTCTTTGTT
CTTCCTATATTTTCCAACAGTATTCTGCTCTTTGTGGAGCTACGGTGGAGGGAGATGTTTGTGTCTGTTTAACAGGCAGTCCGTATCTATGAGGCTAGAGAATATTTTCTTAAACTCCTGGGGAGCCA
CAGACTTCCTTCTGTAAGGTTGTCGCCATGCCACCTGGCCTGCCCCTTCCTCTGTAGAGAAGCTGGAAACAGGGCCACGGAGCCCTCTCCTTCCTCTCAGTTACGGCCCATCTGGTCCTACGGTGGGG
CAGTGCATGGTGTTTGAGGCCAGCTGTGGAAATCCCACATTAGCTCCTTCTCCATCCCGTCTCACCCTGACAGCAGGTTAGCCAGCCCCACGTAACTGTCTATATTAGACGCCCCAGCCGGCTTCCGG
CTGCCTGTCTTTGCTGCCATGTTCTTTTTTACAAGAAGGAAAGAAACAGTTTCTTGCTATTTTTTTTCATAATTTACTATTTATGATGTATTTAAGTGTTTTATTCAGGACAGAGTTCTGTAAGGGGT
GGGAGGGAGTATTTGAGGGAGGGCTGGGGACTTAGAGAGGACATGGGATTCAGCATTTTTATGGAGTGTTACTATTTGCCTCTACTTTGTATTGTTGAGAAATGACAAATGCAGTATAAATAATAAAT
ATCTGGTTTTACTGTA

hide sequence

RefSeq Acc Id:

XM_039102779 ⟹ XP_038958707

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	185,317,319 - 185,361,859 (-)	NCBI
mRatBN7.2	2	182,628,299 - 182,671,584 (-)	NCBI

RefSeq Acc Id:

XM_039102780 ⟹ XP_038958708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	185,317,319 - 185,361,859 (-)	NCBI
mRatBN7.2	2	182,628,299 - 182,671,584 (-)	NCBI


Protein RefSeqs	NP_001036086	(Get FASTA)	NCBI Sequence Viewer
	XP_008759537	(Get FASTA)	NCBI Sequence Viewer
	XP_008759538	(Get FASTA)	NCBI Sequence Viewer
	XP_038958707	(Get FASTA)	NCBI Sequence Viewer
	XP_038958708	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	D3ZSI8	(Get FASTA)	NCBI Sequence Viewer
	EDL85755	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000028609
	ENSRNOP00000086696

RefSeq Acc Id:

NP_001036086 ⟸ NM_001042621

- UniProtKB:

D3ZSI8 (UniProtKB/Swiss-Prot), A0A8I6ANU4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASASSGPAAAGFSPLDSGVPAGTAASGIKRGTVSEGPYASLMPVKKIGHRSVDSSGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAP
VAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHMKYDLKGSTYKRRASQK
EREKTLPTFKDLDFLQDIPDGLFLDADMYSALCKTLQRDCLVLQSFKIMDYSLLMSIHNMDHAQREPMNSETQYSVDTRRPAPQKALYSTAMESIQGEARRGGTVETEDHMGGIPARNNKGERLLLYI
GIIDILQSYRFVKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCNTVFKKIPLKPSPTKKFRSGPSFSRRSGPSGNSCTPSQPTASGEHKAQVTTKAEVEPDIHLGRPDVLPQTPPLEEISEGSPV
PGPSFSPAVGQPLQILNLSSTLEKLDVAESELTH

hide sequence

RefSeq Acc Id:	XP_008759538 ⟸ XM_008761316
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A5T8 (UniProtKB/TrEMBL), A6K2U4 (UniProtKB/TrEMBL), A0A8I6ANU4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASASSGPAAAGFSPLDSGVPAGTAAASGIKRGTVSEGPYASLMPVKKIGHRSVDSSGETTYKK TTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKL LPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHMKYDLKGSTYKRRASQKEREKTLPTFKDLDFLQDIPDGLFLDADMYSALCKTLQRDCLVLQSFKIMDYSLLMSIHNMDHA QREPMNSETQYSIDTRRPAPQKALYSTAMESIQGEARRGGTVETEDHMGGIPARNNKGERLLLYIGIIDILQSYRFVKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCNTVFKKIPLKPSPTKKF RSGPSFSRRSGPSGNSCTPSQPTASGEHKAQVTTKAEVEPDIHLGRPDVLPQTPPLEEISEGSPVPGPSFSPAVGQPLQILNLSSTLEKLDVAESELTH hide sequence

RefSeq Acc Id:	XP_008759537 ⟸ XM_008761315
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6ANU4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASASSGPAAAGFSPLDSGVPAGTAAAASGIKRGTVSEGPYASLMPVKKIGHRSVDSSGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTY APVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHMKYDLKGSTYKRRAS QKEREKTLPTFKDLDFLQDIPDGLFLDADMYSALCKTLQRDCLVLQSFKIMDYSLLMSIHNMDHAQREPMNSETQYSIDTRRPAPQKALYSTAMESIQGEARRGGTVETEDHMGGIPARNNKGERLLL YIGIIDILQSYRFVKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCNTVFKKIPLKPSPTKKFRSGPSFSRRSGPSGNSCTPSQPTASGEHKAQVTTKAEVEPDIHLGRPDVLPQTPPLEEISEGS PVPGPSFSPAVGQPLQILNLSSTLEKLDVAESELTH hide sequence

Ensembl Acc Id:

ENSRNOP00000028609 ⟸ ENSRNOT00000028609

RefSeq Acc Id:	XP_038958708 ⟸ XM_039102780
- Peptide Label:	isoform X2
- UniProtKB:	A0A8L2QH45 (UniProtKB/TrEMBL), A0A8I6ANU4 (UniProtKB/TrEMBL)

Protein Domains

PIPK

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZSI8-F1-model_v2	AlphaFold	D3ZSI8	1-546	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13691537

Promoter ID:

EPDNEW_R2062

Type:

initiation region

Name:

Pip5k1a_1

Description:

phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	196,270,913 - 196,270,973	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-52116	BioCyc
BioCyc Pathway	PWY-6351 [D-myo-inositol (1,4,5)-trisphosphate biosynthesis]	BioCyc
	PWY-6352 [3-phosphoinositide biosynthesis]	BioCyc
BioCyc Pathway Image	PWY-6351	BioCyc
	PWY-6352	BioCyc
Ensembl Genes	ENSRNOG00000021068	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000028609	ENTREZGENE
	ENSRNOT00000119756	ENTREZGENE
Gene3D-CATH	2-Layer Sandwich	UniProtKB/Swiss-Prot
	3.30.800.10	UniProtKB/Swiss-Prot
InterPro	PInositol-4-P-4/5-kinase_C_sf	UniProtKB/Swiss-Prot
	PInositol-4-P-5-kinase	UniProtKB/Swiss-Prot
	PInositol-4-P-5-kinase_core	UniProtKB/Swiss-Prot
	PInositol-4-P-5-kinase_N	UniProtKB/Swiss-Prot
NCBI Gene	365865	ENTREZGENE
PANTHER	PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE TYPE-1 ALPHA	UniProtKB/Swiss-Prot
	PTHR23086	UniProtKB/Swiss-Prot
Pfam	PIP5K	UniProtKB/Swiss-Prot
PhenoGen	Pip5k1a	PhenoGen
PROSITE	PIPK	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000021068	RatGTEx
SMART	PIPKc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SAICAR synthase-like	UniProtKB/Swiss-Prot
UniProt	A0A8I6A5T8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AJ67_RAT	UniProtKB/TrEMBL
	A0A8I6ANU4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QH45	ENTREZGENE, UniProtKB/TrEMBL
	A6K2U4	ENTREZGENE, UniProtKB/TrEMBL
	D3ZSI8	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Pip5k1a	phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha	Pip5k1a_predicted	phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha (predicted)	'predicted' is removed	2292626	APPROVED
2007-03-22	Pip5k1a_predicted	phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha (predicted)	Pip5k1b_predicted	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta (predicted)	Symbol and Name updated to reflect Human and Mouse nomenclature	1299863	APPROVED
2005-01-12	Pip5k1b_predicted	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

Imported Annotations - PID (archival)

BioCyc Pathways

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

Imported Annotations - PID (archival)

BioCyc Pathways