Mrpl15 (mitochondrial ribosomal protein L15) - Rat Genome Database

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Gene: Mrpl15 (mitochondrial ribosomal protein L15) Rattus norvegicus
Analyze
Symbol: Mrpl15
Name: mitochondrial ribosomal protein L15
RGD ID: 1304796
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Predicted to be located in mitochondrion. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL15 (mitochondrial ribosomal protein L15); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 39S ribosomal protein L15, mitochondrial; large ribosomal subunit protein uL15m; LOC297799
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8519,527,745 - 19,539,061 (+)NCBIGRCr8
mRatBN7.2514,729,961 - 14,741,276 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl514,729,979 - 14,741,276 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx516,924,207 - 16,935,288 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0518,537,717 - 18,548,790 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0518,258,877 - 18,269,950 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0514,609,656 - 14,620,965 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl514,609,674 - 14,620,965 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0519,392,153 - 19,403,455 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4514,932,623 - 14,943,904 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1514,932,590 - 14,941,120 (+)NCBI
Celera514,101,085 - 14,112,172 (+)NCBICelera
Cytogenetic Map5q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl15RatCOVID-19  ISOMRPL15 (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744

1 to 20 of 77 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl15Rat(1->4)-beta-D-glucan multiple interactionsISOMrpl15 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of MRPL15 mRNACTDPMID:36331819
Mrpl15Rat1,2-dichloroethane increases expressionISOMrpl15 (Mus musculus)6480464ethylene dichloride results in increased expression of MRPL15 mRNACTDPMID:28960355
Mrpl15Rat1,2-dimethylhydrazine decreases expressionISOMrpl15 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of MRPL15 mRNACTDPMID:22206623
Mrpl15Rat17alpha-ethynylestradiol increases expressionISOMrpl15 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of MRPL15 mRNACTDPMID:17942748
Mrpl15Rat17alpha-ethynylestradiol multiple interactionsISOMrpl15 (Mus musculus)6480464[Ibuprofen co-treated with hydroxyibuprofen co-treated with Diclofenac co-treated with Ethinyl Estradiol] results in decreased expression of MRPL15 mRNA and [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of MRPL15 mRNACTDPMID:17942748 and PMID:37844793
Mrpl15Rat17beta-estradiol affects expressionISOMrpl15 (Mus musculus)6480464Estradiol affects the expression of MRPL15 mRNACTDPMID:39298647
Mrpl15Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOMrpl15 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of MRPL15 mRNACTDPMID:17942748
Mrpl15Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of MRPL15 mRNACTDPMID:33387578
Mrpl15Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMrpl15 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MRPL15 mRNACTDPMID:21570461
Mrpl15Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOMrpl15 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of MRPL15 mRNACTDPMID:19465110
Mrpl15Rat2-hydroxypropanoic acid decreases expressionISOMRPL15 (Homo sapiens)6480464Lactic Acid results in decreased expression of MRPL15 mRNACTDPMID:30851411
Mrpl15Rat3-chloropropane-1,2-diol increases expressionEXP 6480464alpha-Chlorohydrin results in increased expression of MRPL15 proteinCTDPMID:34915118
Mrpl15Rat4,4'-sulfonyldiphenol increases expressionISOMrpl15 (Mus musculus)6480464bisphenol S results in increased expression of MRPL15 mRNACTDPMID:39298647
Mrpl15Rat4,4'-sulfonyldiphenol affects expressionISOMRPL15 (Homo sapiens)6480464bisphenol S affects the expression of MRPL15 proteinCTDPMID:31945527
Mrpl15Rat4-hydroxyphenyl retinamide increases expressionISOMrpl15 (Mus musculus)6480464Fenretinide results in increased expression of MRPL15 mRNACTDPMID:28973697
Mrpl15Ratall-trans-retinoic acid decreases expressionISOMrpl15 (Mus musculus)6480464Tretinoin results in decreased expression of MRPL15 mRNACTDPMID:16788091
Mrpl15Ratall-trans-retinoic acid decreases expressionISOMRPL15 (Homo sapiens)6480464Tretinoin results in decreased expression of MRPL15 mRNACTDPMID:23724009 and PMID:33167477
Mrpl15Ratarsane multiple interactionsISOMRPL15 (Homo sapiens)6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of MRPL15 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of MRPL15 mRNACTDPMID:39836092
Mrpl15Ratarsenic atom multiple interactionsISOMRPL15 (Homo sapiens)6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of MRPL15 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of MRPL15 mRNACTDPMID:39836092
Mrpl15Ratatrazine decreases expressionISOMRPL15 (Homo sapiens)6480464Atrazine results in decreased expression of MRPL15 mRNACTDPMID:22378314

1 to 20 of 77 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl15Ratcellular response to leukemia inhibitory factor acts_upstream_of_or_withinIEAUniProtKB:Q9CPR5 and ensembl:ENSMUSP000001155121600115GO_REF:0000107EnsemblGO_REF:0000107
Mrpl15Ratcellular response to leukemia inhibitory factor acts_upstream_of_or_withinISOMrpl15 (Mus musculus)1624291 PMID:20439489RGDPMID:20439489
Mrpl15Rattranslation involved_inIEAInterPro:IPR0057491600115GO_REF:0000002InterProGO_REF:0000002
Mrpl15Rattranslation involved_inIEAInterPro:IPR005749 and InterPro:IPR0308781600115GO_REF:0000002InterProGO_REF:0000002

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl15Ratlarge ribosomal subunit part_ofIEAInterPro:IPR0057491600115GO_REF:0000002InterProGO_REF:0000002
Mrpl15Ratlarge ribosomal subunit part_ofIEAInterPro:IPR005749 and InterPro:IPR0308781600115GO_REF:0000002InterProGO_REF:0000002
Mrpl15Ratmitochondrial large ribosomal subunit part_ofISOMRPL15 (Homo sapiens)1624291 PMID:25278503 and PMID:28892042RGDPMID:25278503 and PMID:28892042
Mrpl15Ratmitochondrial large ribosomal subunit part_ofIEAUniProtKB:Q9P015 and ensembl:ENSP000002601021600115GO_REF:0000107EnsemblGO_REF:0000107
Mrpl15Ratmitochondrial large ribosomal subunit part_ofIBAPANTHER:PTN000309578 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Mrpl15Ratmitochondrion located_inISOMRPL15 (Homo sapiens)1624291 PMID:28892042RGDGO_REF:0000052 more ...
Mrpl15Ratmitochondrion located_inIEAUniProtKB:Q9P015 and ensembl:ENSP000002601021600115GO_REF:0000107EnsemblGO_REF:0000107
Mrpl15Ratribonucleoprotein complex part_ofIEAUniProtKB-KW:KW-06871600115GO_REF:0000043UniProtGO_REF:0000043
Mrpl15Ratribosome located_inIEAUniProtKB-KW:KW-06891600115GO_REF:0000043UniProtGO_REF:0000043
1 to 9 of 9 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl15Ratprotein binding enablesISOMRPL15 (Homo sapiens)1624291UniProtKB:O95273 more ...RGDPMID:21516116 more ...
Mrpl15Ratstructural constituent of ribosome enablesIEAInterPro:IPR005749 and InterPro:IPR0308781600115GO_REF:0000002InterProGO_REF:0000002
Mrpl15Ratstructural constituent of ribosome enablesIEAInterPro:IPR0057491600115GO_REF:0000002InterProGO_REF:0000002
Mrpl15Ratstructural constituent of ribosome enablesIBAPANTHER:PTN000309575 and SGD:S0000052281600115GO_REF:0000033GO_CentralGO_REF:0000033


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:14651853   PMID:18614015   PMID:20439489   PMID:22658674   PMID:22681889   PMID:25278503   PMID:28892042  



Mrpl15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8519,527,745 - 19,539,061 (+)NCBIGRCr8
mRatBN7.2514,729,961 - 14,741,276 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl514,729,979 - 14,741,276 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx516,924,207 - 16,935,288 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0518,537,717 - 18,548,790 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0518,258,877 - 18,269,950 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0514,609,656 - 14,620,965 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl514,609,674 - 14,620,965 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0519,392,153 - 19,403,455 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4514,932,623 - 14,943,904 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1514,932,590 - 14,941,120 (+)NCBI
Celera514,101,085 - 14,112,172 (+)NCBICelera
Cytogenetic Map5q12NCBI
MRPL15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38854,135,241 - 54,148,514 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl854,135,241 - 54,148,514 (+)EnsemblGRCh38hg38GRCh38
GRCh37855,047,801 - 55,061,074 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36855,210,334 - 55,223,014 (+)NCBINCBI36Build 36hg18NCBI36
Build 34855,210,333 - 55,223,011NCBI
Celera851,038,346 - 51,051,638 (+)NCBICelera
Cytogenetic Map8q11.23NCBI
HuRef850,515,702 - 50,528,983 (+)NCBIHuRef
CHM1_1855,099,593 - 55,112,890 (+)NCBICHM1_1
T2T-CHM13v2.0854,512,543 - 54,525,817 (+)NCBIT2T-CHM13v2.0
Mrpl15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914,843,432 - 4,855,949 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14,843,429 - 4,855,962 (-)EnsemblGRCm39 Ensembl
GRCm3814,773,198 - 4,785,750 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14,773,206 - 4,785,739 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714,763,279 - 4,775,807 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614,763,290 - 4,775,791 (-)NCBIMGSCv36mm8
Celera14,785,037 - 4,797,586 (-)NCBICelera
Cytogenetic Map1A1NCBI
cM Map11.79NCBI
Mrpl15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545413,398,478 - 13,406,794 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545413,398,479 - 13,404,353 (+)NCBIChiLan1.0ChiLan1.0
MRPL15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2769,771,654 - 69,784,720 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1845,496,597 - 45,509,681 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0850,560,420 - 50,573,049 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1847,936,446 - 47,948,584 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl847,935,643 - 47,948,584 (+)Ensemblpanpan1.1panPan2
MRPL15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1295,704,572 - 5,711,577 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl295,704,585 - 5,711,567 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha296,079,400 - 6,086,416 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0295,780,690 - 5,787,722 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl295,780,733 - 5,788,498 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1295,717,373 - 5,724,399 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0295,922,950 - 5,929,947 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0296,006,201 - 6,013,221 (+)NCBIUU_Cfam_GSD_1.0
Mrpl15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530373,787,265 - 73,799,049 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936496986,131 - 1,001,648 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936496986,442 - 997,440 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRPL15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl477,069,092 - 77,083,723 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1477,069,074 - 77,083,595 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2484,142,552 - 84,149,289 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MRPL15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1850,201,805 - 50,214,534 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl850,201,829 - 50,216,206 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603991,720,535 - 91,733,740 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mrpl15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247351,564,789 - 1,573,311 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247351,565,627 - 1,572,471 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Mrpl15
104 total Variants


Assembly: Rnor_5.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
5 19400251 19400252 C T snv BDIX.Cg-Tal/NemOda (KyushuU), BDIX/NemOda (KyushuU) View more Information

Predicted Target Of
Summary Value
Count of predictions:113
Count of miRNA genes:97
Interacting mature miRNAs:100
Transcripts:ENSRNOT00000011619
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 14 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)5894822853948228Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5384401847869213Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
2312562Pur18Proteinuria QTL 182.60.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)5213896532656739Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat
61462Niddm10Non-insulin dependent diabetes mellitus QTL 103.90.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)5511215947171491Rat

1 to 10 of 14 rows
RH131914  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2514,738,850 - 14,739,045 (+)MAPPERmRatBN7.2
Rnor_6.0514,618,540 - 14,618,734NCBIRnor6.0
Rnor_5.0519,401,030 - 19,401,224UniSTSRnor5.0
RGSC_v3.4514,941,479 - 14,941,673UniSTSRGSC3.4
Celera514,109,747 - 14,109,941UniSTS
Cytogenetic Map5q12UniSTS
RH140473  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2514,738,061 - 14,738,153 (+)MAPPERmRatBN7.2
Rnor_6.0514,617,751 - 14,617,842NCBIRnor6.0
Rnor_5.0519,400,241 - 19,400,332UniSTSRnor5.0
RGSC_v3.4514,940,690 - 14,940,781UniSTSRGSC3.4
Celera514,108,958 - 14,109,049UniSTS
Cytogenetic Map5q12UniSTS
BE118926  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2514,739,999 - 14,740,166 (+)MAPPERmRatBN7.2
Rnor_6.0514,619,689 - 14,619,855NCBIRnor6.0
Rnor_5.0519,402,179 - 19,402,345UniSTSRnor5.0
RGSC_v3.4514,942,628 - 14,942,794UniSTSRGSC3.4
Celera514,110,896 - 14,111,062UniSTS
Cytogenetic Map5q12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000011619   ⟹   ENSRNOP00000011619
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl514,729,995 - 14,741,276 (+)Ensembl
Rnor_6.0 Ensembl514,609,684 - 14,620,965 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000085621   ⟹   ENSRNOP00000074933
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl514,729,979 - 14,738,570 (+)Ensembl
Rnor_6.0 Ensembl514,609,674 - 14,618,071 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000115029   ⟹   ENSRNOP00000077151
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl514,729,979 - 14,732,821 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000117082   ⟹   ENSRNOP00000085368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl514,730,016 - 14,739,065 (+)Ensembl
RefSeq Acc Id: NM_001106633   ⟹   NP_001100103
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8519,527,746 - 19,539,061 (+)NCBI
mRatBN7.2514,729,961 - 14,741,276 (+)NCBI
Rnor_6.0514,609,684 - 14,620,965 (+)NCBI
Rnor_5.0519,392,153 - 19,403,455 (+)NCBI
RGSC_v3.4514,932,623 - 14,943,904 (+)RGD
Celera514,101,085 - 14,112,172 (+)RGD
Sequence:
RefSeq Acc Id: NM_001399003   ⟹   NP_001385932
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8519,527,746 - 19,536,164 (+)NCBI
mRatBN7.2514,729,961 - 14,738,379 (+)NCBI
RefSeq Acc Id: NM_001399007   ⟹   NP_001385936
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8519,527,746 - 19,536,164 (+)NCBI
mRatBN7.2514,729,961 - 14,738,379 (+)NCBI
RefSeq Acc Id: NM_001399008   ⟹   NP_001385937
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8519,527,746 - 19,536,164 (+)NCBI
mRatBN7.2514,729,961 - 14,738,379 (+)NCBI
RefSeq Acc Id: NM_001399009   ⟹   NP_001385938
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8519,527,746 - 19,536,164 (+)NCBI
mRatBN7.2514,729,961 - 14,738,379 (+)NCBI
RefSeq Acc Id: NR_174148
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8519,527,746 - 19,536,164 (+)NCBI
mRatBN7.2514,729,961 - 14,738,379 (+)NCBI
RefSeq Acc Id: XM_063287273   ⟹   XP_063143343
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8519,527,745 - 19,531,125 (+)NCBI
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: NP_001100103   ⟸   NM_001106633
- Peptide Label: isoform 2
- UniProtKB: D4A4B1 (UniProtKB/TrEMBL),   D4A4A7 (UniProtKB/TrEMBL),   A6JFJ4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000011619   ⟸   ENSRNOT00000011619
Ensembl Acc Id: ENSRNOP00000074933   ⟸   ENSRNOT00000085621
Ensembl Acc Id: ENSRNOP00000085368   ⟸   ENSRNOT00000117082
Ensembl Acc Id: ENSRNOP00000077151   ⟸   ENSRNOT00000115029
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K9B4-F1-model_v2 AlphaFold A0A0G2K9B4 1-295 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13693544
Promoter ID:EPDNEW_R4069
Type:initiation region
Name:Mrpl15_1
Description:mitochondrial ribosomal protein L15
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0514,609,710 - 14,609,770EPDNEW


1 to 31 of 31 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-42151 BioCyc
Ensembl Genes ENSRNOG00000008566 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000011619.8 UniProtKB/TrEMBL
  ENSRNOT00000085621 ENTREZGENE
  ENSRNOT00000085621.2 UniProtKB/TrEMBL
  ENSRNOT00000115029 ENTREZGENE
  ENSRNOT00000115029.1 UniProtKB/TrEMBL
  ENSRNOT00000117082 ENTREZGENE
  ENSRNOT00000117082.1 UniProtKB/TrEMBL
Gene3D-CATH 3.100.10.10 UniProtKB/TrEMBL
InterPro L18e/L15P_sf UniProtKB/TrEMBL
  Ribosomal_L15 UniProtKB/TrEMBL
  Ribosomal_L15_bac-type UniProtKB/TrEMBL
  Ribosomal_L18e/L15 UniProtKB/TrEMBL
KEGG Report rno:297799 UniProtKB/TrEMBL
NCBI Gene 297799 ENTREZGENE
PANTHER 39S RIBOSOMAL PROTEIN L15, MITOCHONDRIAL UniProtKB/TrEMBL
  Ribosom_L15_bac UniProtKB/TrEMBL
Pfam Ribosomal_L18e UniProtKB/TrEMBL
PhenoGen Mrpl15 PhenoGen
RatGTEx ENSRNOG00000008566 RatGTEx
Superfamily-SCOP Ribosomal_L18e/L15 UniProtKB/TrEMBL
UniProt A0A0G2K9B4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y9C7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A254 ENTREZGENE, UniProtKB/TrEMBL
  A6JFJ4 ENTREZGENE, UniProtKB/TrEMBL
  A6JFJ5 ENTREZGENE, UniProtKB/TrEMBL
  A6JFJ6 ENTREZGENE, UniProtKB/TrEMBL
  D4A4A7 ENTREZGENE
  D4A4B1 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary D4A4A7 UniProtKB/TrEMBL
1 to 31 of 31 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Mrpl15  mitochondrial ribosomal protein L15   Mrpl15_predicted  mitochondrial ribosomal protein L15 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Mrpl15_predicted  mitochondrial ribosomal protein L15 (predicted)      Symbol and Name status set to approved 70820 APPROVED