Rps19l6 (ribosomal protein S19 like 6) - Rat Genome Database

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Gene: Rps19l6 (ribosomal protein S19 like 6) Rattus norvegicus
Analyze
Symbol: Rps19l6
Name: ribosomal protein S19 like 6
RGD ID: 9177507
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 40S ribosomal protein S19 pseudogene; 40S ribosomal protein S19-like; hypothetical LOC100361668; LOC100361668; LOC103691071; ps19l2; ribosomal protein S19 like 2; small ribosomal subunit protein eS19-like
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81210,843,994 - 10,844,353 (-)NCBIGRCr8
mRatBN7.2125,807,691 - 5,808,050 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0126,913,889 - 6,914,248 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0129,010,299 - 9,010,639 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4126,303,040 - 6,303,380 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera127,565,487 - 7,565,846 (-)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Rps19l6
3 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)1219318387Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
724526Uae3Urinary albumin excretion QTL 34.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)12390696910373166Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12136247923Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)127977298525593Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_039090087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_039090087   ⟹   XP_038946015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81210,843,994 - 10,844,353 (-)NCBI
mRatBN7.2125,807,691 - 5,808,050 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038946015 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038946015   ⟸   XM_039090087


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-20179 BioCyc
NCBI Gene LOC103691071 ENTREZGENE
PhenoGen Rps19l6 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2025-01-21 Rps19l6  ribosomal protein S19 like 6  ps19l2  ribosomal protein S19 like 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2023-09-19 ps19l2  ribosomal protein S19 like 2  LOC103691071  40S ribosomal protein S19 pseudogene  Symbol and Name Changed 1299863 APPROVED
2015-07-29 LOC103691071  40S ribosomal protein S19 pseudogene  LOC100361668  hypothetical LOC100361668  Data merged from RGD:2319705 737654 PROVISIONAL
2014-08-25 LOC103691071  40S ribosomal protein S19 pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL
2010-05-05 LOC100361668  hypothetical LOC100361668      Symbol and Name status set to provisional 70820 PROVISIONAL