Mcm4 (minichromosome maintenance complex component 4)

Gene: Mcm4 (minichromosome maintenance complex component 4) Chinchilla lanigera

Analyze

Symbol:

Mcm4

Name:

minichromosome maintenance complex component 4

RGD ID:

9044132

Description:

ENCODES a protein that exhibits DNA helicase activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA unwinding involved in DNA replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 26 (ortholog); immunodeficiency 54 (ortholog); FOUND IN CMG complex (ortholog); MCM complex (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

DNA replication licensing factor MCM4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	7,891,456 - 7,908,462 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	7,891,646 - 7,908,240 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

immunodeficiency 26 (ISO)

immunodeficiency 54 (ISO)

microcephaly (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA unwinding involved in DNA replication (ISO)

Cellular Component

CMG complex (ISO)

MCM complex (ISO)

nucleoplasm (ISO)

nucleus (ISO)

Molecular Function

DNA helicase activity (ISO)

protein binding (ISO)

single-stranded DNA binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Mcm4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	7,891,456 - 7,908,462 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	7,891,646 - 7,908,240 (+)	NCBI	ChiLan1.0	ChiLan1.0

MCM4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	47,960,941 - 47,978,160 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	47,960,185 - 47,978,160 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	48,873,501 - 48,890,720 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	49,036,047 - 49,052,621 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	49,036,046 - 49,052,621	NCBI
Celera	8	44,858,902 - 44,875,475 (+)	NCBI		Celera
Cytogenetic Map	8	q11.21	NCBI
HuRef	8	44,335,726 - 44,353,327 (+)	NCBI		HuRef
CHM1_1	8	48,925,125 - 48,943,082 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	48,337,189 - 48,354,408 (+)	NCBI		T2T-CHM13v2.0

Mcm4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	15,441,761 - 15,455,264 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	15,441,761 - 15,455,264 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	15,623,897 - 15,637,400 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	15,623,897 - 15,637,400 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	15,623,990 - 15,637,493 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	15,537,681 - 15,550,934 (-)	NCBI		MGSCv36	mm8
Celera	16	16,200,304 - 16,213,825 (-)	NCBI		Celera
Cytogenetic Map	16	A2	NCBI
cM Map	16	10.09	NCBI

Mcm4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	98,762,599 - 98,776,300 (+)	NCBI		GRCr8
mRatBN7.2	11	85,258,443 - 85,272,144 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	85,258,443 - 85,272,144 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	93,985,465 - 93,999,169 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	86,646,623 - 86,660,327 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	85,700,230 - 85,713,934 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	89,511,191 - 89,524,892 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	89,511,191 - 89,524,892 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	92,565,514 - 92,579,215 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	87,169,742 - 87,183,443 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	87,215,525 - 87,215,708 (+)	NCBI
Celera	11	83,998,817 - 84,012,516 (+)	NCBI		Celera
Cytogenetic Map	11	q23	NCBI

MCM4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	63,594,184 - 63,611,453 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	39,287,937 - 39,304,974 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	44,387,529 - 44,404,773 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	41,779,624 - 41,794,996 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	41,778,247 - 41,794,783 (+)	Ensembl	panpan1.1		panPan2

MCM4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	29	244,634 - 261,154 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	29	244,656 - 260,991 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	29	670,093 - 687,010 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	29	242,674 - 259,603 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	29	242,628 - 259,596 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	29	241,027 - 256,505 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	29	435,880 - 453,002 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	29	504,123 - 521,263 (+)	NCBI		UU_Cfam_GSD_1.0

Mcm4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	79,515,218 - 79,532,505 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936590	4,704,972 - 4,722,427 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936590	4,705,028 - 4,722,320 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MCM4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	79,674,739 - 79,686,685 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	79,674,737 - 79,686,964 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	87,134,029 - 87,142,341 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MCM4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	44,120,291 - 44,136,625 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	44,120,301 - 44,138,193 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	97,951,742 - 97,968,921 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mcm4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	7,516,516 - 7,533,760 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	7,516,510 - 7,533,789 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005396038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013520250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013520251	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01045309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01161956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000021171 ⟹ ENSCLAP00000020970

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955454	7,891,456 - 7,908,462 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000021172 ⟹ ENSCLAP00000020971

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955454	7,891,456 - 7,908,462 (+)	Ensembl

RefSeq Acc Id:

XM_005396038 ⟹ XP_005396095

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955454	7,891,646 - 7,908,240 (+)	NCBI

Sequence:

show sequence

CGCGGGGCGGTGACGACAGCACCGCCGGCGGGAACTCTCATCCCTGCGTGTGTTGTCTTCTCTC
CGGCCCTGCAGGTATCCTGTCATCATGTCGTCGCCGGCGTCGACTCCGAGCCGCCGCAGCAGCC
GGCGCGGATGGACCACCCCCGCGCAGACGCCCCGAAGCGAGGATGCCAGGTCATCTCCCTCTCA
GAGACGTAGAGGCGAGGATTCCACTAGCACTGGAGAGCTGCAGCCGATGCCCACCTCCCCCGGA
GCGGACCTGCAGAGCCCTGCGGCTCAGGATGCCTTGTTTTCCAGCCCTCCGCAGATGCATTCGT
CAGCTATTCCGCTGGACTTTGATATTAGCTCACCGCTGACATATGGCACTCCCAGCTCTCGGGT
AGAGGGAACCCCAAGGAGTGGGGTTAGGGGCACACCTGTGAGGCAGAGGCCTGACCTGGGGTCT
GCTCGCAAAGGTCTGCAAGTGGATCTGCAGTCTGATGGGGCCGCAGCAGAAGACGTAGTGGCAA
GTGAACAGTCTCTGGGCCAAAAACTTGTTATCTGGGGAACAGATGTAAATGTAGCAACATGCAA
AGAAAACTTTCAGAGATTTCTTCAGCGTTTCATTGATCCTCTGGCCAAAGAAGAAGAAAGTGTT
GGCATAGATATTACTGAACCTGTGTACATGCAACGACTTGCAGAGATCAATGTTATTGGGGAGC
CATTTTTAAATGTAAACTGTGAACACATAAAATCGTTTGATAAGAATTTGTATAGGCAGCTTGT
CTGCTACCCACAGGAGGTTATCCCAACCTTTGACATGGCTGTTAATGAGATATTTTTTGAGCGT
TACCCTGACTCCATCTTAGAACATCAGATCCAAGTAAGACCATTCAATGCACTAAAGACAAAGA
ATATGAGAAACCTAAATCCAGAAGACATTGACCAGCTCATCACCATCAGCGGCATGGTCATCAG
GACGTCCCAGCTGATACCCGAGATGCAAGAGGCCTTCTTCCAGTGCCAAGTGTGCTCGCACACG
ACCCGGGTGGAGATGGACCGCGGCCGCATCGCCGAGCCCTGCGCTTGTGGGCGCTGCCACACCA
TGCACAGCATGGCGCTGATCCACAACCGCTCCCTCTTCTCTGACAAGCAGATGATCAAACTTCA
AGAGTCTCCTGAAGACATGCCTGCTGGGCAGACACCACACACTGTCATCCTTTTTGCACACAAT
GATCTTGTGGACAAGGTTCAGCCGGGGGACAGAGTGAATGTCACAGGCATCTATCGAGCAGTAC
CTATTCGAGTCAATCCAAGAGTGAGCAACGTGAAGTCTGTCTACAAAACGCACATTGATGTCAT
TCATTACCGGAAAACGGATGCCAAACGGCTGCATGGCCTTGACGAAGAAGCAGAGCAGAAACTT
TTTTCAGAGAAACGTGTGGAATTGCTGAAGGAACTTTCCAGGAAACCGGACATTTACGAGAGAC
TTGCCTCCGCTTTGGCTCCCAGCATTTACGAACATGAAGATATAAAGAAGGGAATCTTGCTTCA
GCTCTTTGGTGGAACGAGGAAGGATTTCAGTCACACAGGAAGGGGCAAATTTCGCGCTGAGATC
AACATCCTGCTGTGCGGTGACCCTGGCACCAGCAAGTCGCAGCTGCTGCAGTACGTGTATAACC
TGGTTCCCAGGGGCCAGTACACGTCTGGGAAGGGCTCCAGTGCCGTGGGCCTCACTGCCTATGT
GATGAAGGACCCTGAGACCAGACAGCTAGTCCTGCAGACAGGCGCCCTCGTCCTGAGTGACAAC
GGCATCTGCTGCATCGACGAGTTTGACAAAATGAATGAGAGTACAAGGTCAGTGCTCCACGAAG
TCATGGAGCAGCAGACGCTGTCCATCGCAAAGGCTGGGATCATCTGTCAGCTTAACGCGCGCAC
CTCTGTTCTGGCAGCAGCAAACCCCATTGAGTCTCAGTGGAATCCCAAAAAAACGACCATTGAG
AACATCCAGCTACCTCACACGTTGTTGTCAAGGTTTGATCTGATCTTCCTCATGCTGGACCCTC
AGGACGAGGCGTACGACAGGCGTCTGGCTCATCACCTGGTCTCGCTGTACTACCAGAGTCAGGA
GCAGGTGGAGGAGGAGTTCTTGGACATGGCAGTGCTAAAGGACTACATTGCTTACGCTCACAGC
ACCATCATGCCCCGGCTCAGCGAGGAGGCCAGCCAGGCTCTTATTGAGGCTTATGTGGACATGA
GGAAGATTGGTAGTAGCCGAGGAATGGTTTCCGCGTACCCTCGGCAGCTGGAGTCATTAATTCG
TTTAGCAGAAGCCCATGCAAAAGTGCGATTTTCAAGCAAAGTTGAAGCAATTGATGTGGAAGAG
GCAAAACGGCTCCACAGGGAGGCCCTGAAGCAGTCTGCAACTGACCCCCGGACCGGCATTGTGG
ACATATCCATTCTTACTACAGGAATGAGCGCCACCTCTCGGAAACGGAAAGAAGAGTTAGCTGA
AGCGTTGAAGAAACTTATTTTATCTAAGGGCAAAACGCCAGCTCTAAAATACCAGCAACTGTTT
GAAGATATTCGGGGGCAATCTGACATAGCAATTACCAAAGATATGTTTGAAGAAGCCCTGCGTG
CCTTGGCTGATGACGACTTCTTAACAGTGACCGGGAAAACTGTCCGCTTGCTGTAAGGCTGCTG
TGAGCTGTGCTCCTCTGGCGCCTCCTGGGCGTGCGTGCCGCCTGGGGGCCAGCAGTGGCCACCA
CTGCCCGTCGATTCTGAAAAGTGTTATTCAGCTCTGTACTCACTTTCGAACCTGGGTTTAATTT
TGTTAGTGTTTGTTTTCATTTTTTAACATCTTACATAAACCTACTGTACCAATTTATAAGCACA
TACAGAAGAGCTTACTATCTCAAAGTGGCGGGTAACAGCAGGGCTTGTGGTTTGTGTGTACACA
CCGAGAGCTACACTGTGTCAGTCTTCTTTGGACAGGGCAGTCTGCCTTATACTGGACTTCATGA
TGGAAGGACCATCGGTGCGTGCGGGGGGATTTGGGGAGAGGAGATAACAGACGGTGGCCAGGGT
GTGCCTTCCAGTGTGGAACCATGAGGGGCGAGAGCCTTTGTCCCTTTGTTCTGCACTCGAGTAT
CTTCTTTTTAGAGGTTTTTTTCTTGTGGCTACTGTTAGATCATGAATGTGTGATTGGCAGTGAT
TACAGATTCGCTTCTGCTTTACCTGTGTATGTAAAACTTTACTAAATAAATGATAGAATAGTGA
A

hide sequence

RefSeq Acc Id:

XM_013520250 ⟹ XP_013375704

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955454	7,891,671 - 7,908,240 (+)	NCBI

Sequence:

show sequence

CGGCGGGAACTCTCATCCCTGCGTGTGTTGTCTTCTCTCCGGCCCTGCAGGTATCCTGTGTAAG
TCGCCGGGTGGCCGCCTTGAGGGTAACCGCGCGTGGTCTGGGAGGGCGCAGCGTGGAACTCGGC
GGCGGGGCGGGAAGGGTGCGGAACAGGCGAACGCGGCGCGAGCGGTCCTTGTCGTTCCGGATCC
CAGCATCATGTCGTCGCCGGCGTCGACTCCGAGCCGCCGCAGCAGCCGGCGCGGATGGACCACC
CCCGCGCAGACGCCCCGAAGCGAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGAGG
ATTCCACTAGCACTGGAGAGCTGCAGCCGATGCCCACCTCCCCCGGAGCGGACCTGCAGAGCCC
TGCGGCTCAGGATGCCTTGTTTTCCAGCCCTCCGCAGATGCATTCGTCAGCTATTCCGCTGGAC
TTTGATATTAGCTCACCGCTGACATATGGCACTCCCAGCTCTCGGGTAGAGGGAACCCCAAGGA
GTGGGGTTAGGGGCACACCTGTGAGGCAGAGGCCTGACCTGGGGTCTGCTCGCAAAGGTCTGCA
AGTGGATCTGCAGTCTGATGGGGCCGCAGCAGAAGACGTAGTGGCAAGTGAACAGTCTCTGGGC
CAAAAACTTGTTATCTGGGGAACAGATGTAAATGTAGCAACATGCAAAGAAAACTTTCAGAGAT
TTCTTCAGCGTTTCATTGATCCTCTGGCCAAAGAAGAAGAAAGTGTTGGCATAGATATTACTGA
ACCTGTGTACATGCAACGACTTGCAGAGATCAATGTTATTGGGGAGCCATTTTTAAATGTAAAC
TGTGAACACATAAAATCGTTTGATAAGAATTTGTATAGGCAGCTTGTCTGCTACCCACAGGAGG
TTATCCCAACCTTTGACATGGCTGTTAATGAGATATTTTTTGAGCGTTACCCTGACTCCATCTT
AGAACATCAGATCCAAGTAAGACCATTCAATGCACTAAAGACAAAGAATATGAGAAACCTAAAT
CCAGAAGACATTGACCAGCTCATCACCATCAGCGGCATGGTCATCAGGACGTCCCAGCTGATAC
CCGAGATGCAAGAGGCCTTCTTCCAGTGCCAAGTGTGCTCGCACACGACCCGGGTGGAGATGGA
CCGCGGCCGCATCGCCGAGCCCTGCGCTTGTGGGCGCTGCCACACCATGCACAGCATGGCGCTG
ATCCACAACCGCTCCCTCTTCTCTGACAAGCAGATGATCAAACTTCAAGAGTCTCCTGAAGACA
TGCCTGCTGGGCAGACACCACACACTGTCATCCTTTTTGCACACAATGATCTTGTGGACAAGGT
TCAGCCGGGGGACAGAGTGAATGTCACAGGCATCTATCGAGCAGTACCTATTCGAGTCAATCCA
AGAGTGAGCAACGTGAAGTCTGTCTACAAAACGCACATTGATGTCATTCATTACCGGAAAACGG
ATGCCAAACGGCTGCATGGCCTTGACGAAGAAGCAGAGCAGAAACTTTTTTCAGAGAAACGTGT
GGAATTGCTGAAGGAACTTTCCAGGAAACCGGACATTTACGAGAGACTTGCCTCCGCTTTGGCT
CCCAGCATTTACGAACATGAAGATATAAAGAAGGGAATCTTGCTTCAGCTCTTTGGTGGAACGA
GGAAGGATTTCAGTCACACAGGAAGGGGCAAATTTCGCGCTGAGATCAACATCCTGCTGTGCGG
TGACCCTGGCACCAGCAAGTCGCAGCTGCTGCAGTACGTGTATAACCTGGTTCCCAGGGGCCAG
TACACGTCTGGGAAGGGCTCCAGTGCCGTGGGCCTCACTGCCTATGTGATGAAGGACCCTGAGA
CCAGACAGCTAGTCCTGCAGACAGGCGCCCTCGTCCTGAGTGACAACGGCATCTGCTGCATCGA
CGAGTTTGACAAAATGAATGAGAGTACAAGGTCAGTGCTCCACGAAGTCATGGAGCAGCAGACG
CTGTCCATCGCAAAGGCTGGGATCATCTGTCAGCTTAACGCGCGCACCTCTGTTCTGGCAGCAG
CAAACCCCATTGAGTCTCAGTGGAATCCCAAAAAAACGACCATTGAGAACATCCAGCTACCTCA
CACGTTGTTGTCAAGGTTTGATCTGATCTTCCTCATGCTGGACCCTCAGGACGAGGCGTACGAC
AGGCGTCTGGCTCATCACCTGGTCTCGCTGTACTACCAGAGTCAGGAGCAGGTGGAGGAGGAGT
TCTTGGACATGGCAGTGCTAAAGGACTACATTGCTTACGCTCACAGCACCATCATGCCCCGGCT
CAGCGAGGAGGCCAGCCAGGCTCTTATTGAGGCTTATGTGGACATGAGGAAGATTGGTAGTAGC
CGAGGAATGGTTTCCGCGTACCCTCGGCAGCTGGAGTCATTAATTCGTTTAGCAGAAGCCCATG
CAAAAGTGCGATTTTCAAGCAAAGTTGAAGCAATTGATGTGGAAGAGGCAAAACGGCTCCACAG
GGAGGCCCTGAAGCAGTCTGCAACTGACCCCCGGACCGGCATTGTGGACATATCCATTCTTACT
ACAGGAATGAGCGCCACCTCTCGGAAACGGAAAGAAGAGTTAGCTGAAGCGTTGAAGAAACTTA
TTTTATCTAAGGGCAAAACGCCAGCTCTAAAATACCAGCAACTGTTTGAAGATATTCGGGGGCA
ATCTGACATAGCAATTACCAAAGATATGTTTGAAGAAGCCCTGCGTGCCTTGGCTGATGACGAC
TTCTTAACAGTGACCGGGAAAACTGTCCGCTTGCTGTAAGGCTGCTGTGAGCTGTGCTCCTCTG
GCGCCTCCTGGGCGTGCGTGCCGCCTGGGGGCCAGCAGTGGCCACCACTGCCCGTCGATTCTGA
AAAGTGTTATTCAGCTCTGTACTCACTTTCGAACCTGGGTTTAATTTTGTTAGTGTTTGTTTTC
ATTTTTTAACATCTTACATAAACCTACTGTACCAATTTATAAGCACATACAGAAGAGCTTACTA
TCTCAAAGTGGCGGGTAACAGCAGGGCTTGTGGTTTGTGTGTACACACCGAGAGCTACACTGTG
TCAGTCTTCTTTGGACAGGGCAGTCTGCCTTATACTGGACTTCATGATGGAAGGACCATCGGTG
CGTGCGGGGGGATTTGGGGAGAGGAGATAACAGACGGTGGCCAGGGTGTGCCTTCCAGTGTGGA
ACCATGAGGGGCGAGAGCCTTTGTCCCTTTGTTCTGCACTCGAGTATCTTCTTTTTAGAGGTTT
TTTTCTTGTGGCTACTGTTAGATCATGAATGTGTGATTGGCAGTGATTACAGATTCGCTTCTGC
TTTACCTGTGTATGTAAAACTTTACTAAATAAATGATAGAATAGTGAA

hide sequence

RefSeq Acc Id:

XM_013520251 ⟹ XP_013375705

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955454	7,891,702 - 7,908,240 (+)	NCBI

Sequence:

show sequence

CTTCTCTCCGGCCCTGCAGCATCATGTCGTCGCCGGCGTCGACTCCGAGCCGCCGCAGCAGCCG
GCGCGGATGGACCACCCCCGCGCAGACGCCCCGAAGCGAGGATGCCAGGTCATCTCCCTCTCAG
AGACGTAGAGGCGAGGATTCCACTAGCACTGGAGAGCTGCAGCCGATGCCCACCTCCCCCGGAG
CGGACCTGCAGAGCCCTGCGGCTCAGGATGCCTTGTTTTCCAGCCCTCCGCAGATGCATTCGTC
AGCTATTCCGCTGGACTTTGATATTAGCTCACCGCTGACATATGGCACTCCCAGCTCTCGGGTA
GAGGGAACCCCAAGGAGTGGGGTTAGGGGCACACCTGTGAGGCAGAGGCCTGACCTGGGGTCTG
CTCGCAAAGGTCTGCAAGTGGATCTGCAGTCTGATGGGGCCGCAGCAGAAGACGTAGTGGCAAG
TGAACAGTCTCTGGGCCAAAAACTTGTTATCTGGGGAACAGATGTAAATGTAGCAACATGCAAA
GAAAACTTTCAGAGATTTCTTCAGCGTTTCATTGATCCTCTGGCCAAAGAAGAAGAAAGTGTTG
GCATAGATATTACTGAACCTGTGTACATGCAACGACTTGCAGAGATCAATGTTATTGGGGAGCC
ATTTTTAAATGTAAACTGTGAACACATAAAATCGTTTGATAAGAATTTGTATAGGCAGCTTGTC
TGCTACCCACAGGAGGTTATCCCAACCTTTGACATGGCTGTTAATGAGATATTTTTTGAGCGTT
ACCCTGACTCCATCTTAGAACATCAGATCCAAGTAAGACCATTCAATGCACTAAAGACAAAGAA
TATGAGAAACCTAAATCCAGAAGACATTGACCAGCTCATCACCATCAGCGGCATGGTCATCAGG
ACGTCCCAGCTGATACCCGAGATGCAAGAGGCCTTCTTCCAGTGCCAAGTGTGCTCGCACACGA
CCCGGGTGGAGATGGACCGCGGCCGCATCGCCGAGCCCTGCGCTTGTGGGCGCTGCCACACCAT
GCACAGCATGGCGCTGATCCACAACCGCTCCCTCTTCTCTGACAAGCAGATGATCAAACTTCAA
GAGTCTCCTGAAGACATGCCTGCTGGGCAGACACCACACACTGTCATCCTTTTTGCACACAATG
ATCTTGTGGACAAGGTTCAGCCGGGGGACAGAGTGAATGTCACAGGCATCTATCGAGCAGTACC
TATTCGAGTCAATCCAAGAGTGAGCAACGTGAAGTCTGTCTACAAAACGCACATTGATGTCATT
CATTACCGGAAAACGGATGCCAAACGGCTGCATGGCCTTGACGAAGAAGCAGAGCAGAAACTTT
TTTCAGAGAAACGTGTGGAATTGCTGAAGGAACTTTCCAGGAAACCGGACATTTACGAGAGACT
TGCCTCCGCTTTGGCTCCCAGCATTTACGAACATGAAGATATAAAGAAGGGAATCTTGCTTCAG
CTCTTTGGTGGAACGAGGAAGGATTTCAGTCACACAGGAAGGGGCAAATTTCGCGCTGAGATCA
ACATCCTGCTGTGCGGTGACCCTGGCACCAGCAAGTCGCAGCTGCTGCAGTACGTGTATAACCT
GGTTCCCAGGGGCCAGTACACGTCTGGGAAGGGCTCCAGTGCCGTGGGCCTCACTGCCTATGTG
ATGAAGGACCCTGAGACCAGACAGCTAGTCCTGCAGACAGGCGCCCTCGTCCTGAGTGACAACG
GCATCTGCTGCATCGACGAGTTTGACAAAATGAATGAGAGTACAAGGTCAGTGCTCCACGAAGT
CATGGAGCAGCAGACGCTGTCCATCGCAAAGGCTGGGATCATCTGTCAGCTTAACGCGCGCACC
TCTGTTCTGGCAGCAGCAAACCCCATTGAGTCTCAGTGGAATCCCAAAAAAACGACCATTGAGA
ACATCCAGCTACCTCACACGTTGTTGTCAAGGTTTGATCTGATCTTCCTCATGCTGGACCCTCA
GGACGAGGCGTACGACAGGCGTCTGGCTCATCACCTGGTCTCGCTGTACTACCAGAGTCAGGAG
CAGGTGGAGGAGGAGTTCTTGGACATGGCAGTGCTAAAGGACTACATTGCTTACGCTCACAGCA
CCATCATGCCCCGGCTCAGCGAGGAGGCCAGCCAGGCTCTTATTGAGGCTTATGTGGACATGAG
GAAGATTGGTAGTAGCCGAGGAATGGTTTCCGCGTACCCTCGGCAGCTGGAGTCATTAATTCGT
TTAGCAGAAGCCCATGCAAAAGTGCGATTTTCAAGCAAAGTTGAAGCAATTGATGTGGAAGAGG
CAAAACGGCTCCACAGGGAGGCCCTGAAGCAGTCTGCAACTGACCCCCGGACCGGCATTGTGGA
CATATCCATTCTTACTACAGGAATGAGCGCCACCTCTCGGAAACGGAAAGAAGAGTTAGCTGAA
GCGTTGAAGAAACTTATTTTATCTAAGGGCAAAACGCCAGCTCTAAAATACCAGCAACTGTTTG
AAGATATTCGGGGGCAATCTGACATAGCAATTACCAAAGATATGTTTGAAGAAGCCCTGCGTGC
CTTGGCTGATGACGACTTCTTAACAGTGACCGGGAAAACTGTCCGCTTGCTGTAAGGCTGCTGT
GAGCTGTGCTCCTCTGGCGCCTCCTGGGCGTGCGTGCCGCCTGGGGGCCAGCAGTGGCCACCAC
TGCCCGTCGATTCTGAAAAGTGTTATTCAGCTCTGTACTCACTTTCGAACCTGGGTTTAATTTT
GTTAGTGTTTGTTTTCATTTTTTAACATCTTACATAAACCTACTGTACCAATTTATAAGCACAT
ACAGAAGAGCTTACTATCTCAAAGTGGCGGGTAACAGCAGGGCTTGTGGTTTGTGTGTACACAC
CGAGAGCTACACTGTGTCAGTCTTCTTTGGACAGGGCAGTCTGCCTTATACTGGACTTCATGAT
GGAAGGACCATCGGTGCGTGCGGGGGGATTTGGGGAGAGGAGATAACAGACGGTGGCCAGGGTG
TGCCTTCCAGTGTGGAACCATGAGGGGCGAGAGCCTTTGTCCCTTTGTTCTGCACTCGAGTATC
TTCTTTTTAGAGGTTTTTTTCTTGTGGCTACTGTTAGATCATGAATGTGTGATTGGCAGTGATT
ACAGATTCGCTTCTGCTTTACCTGTGTATGTAAAACTTTACTAAATAAATGATAGAATAGTGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005396095	(Get FASTA)	NCBI Sequence Viewer
	XP_013375704	(Get FASTA)	NCBI Sequence Viewer
	XP_013375705	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000020970
	ENSCLAP00000020970.1
	ENSCLAP00000020971
	ENSCLAP00000020971.1

RefSeq Acc Id:

XP_005396095 ⟸ XM_005396038

- UniProtKB:

A0A8C2VUZ4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSPASTPSRRSSRRGWTTPAQTPRSEDARSSPSQRRRGEDSTSTGELQPMPTSPGADLQSPAA
QDALFSSPPQMHSSAIPLDFDISSPLTYGTPSSRVEGTPRSGVRGTPVRQRPDLGSARKGLQVD
LQSDGAAAEDVVASEQSLGQKLVIWGTDVNVATCKENFQRFLQRFIDPLAKEEESVGIDITEPV
YMQRLAEINVIGEPFLNVNCEHIKSFDKNLYRQLVCYPQEVIPTFDMAVNEIFFERYPDSILEH
QIQVRPFNALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCSHTTRVEMDRG
RIAEPCACGRCHTMHSMALIHNRSLFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKVQP
GDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVEL
LKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDP
GTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEF
DKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTL
LSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSQEQVEEEFLDMAVLKDYIAYAHSTIMPRLSE
EASQALIEAYVDMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSSKVEAIDVEEAKRLHREA
LKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRGQSD
IAITKDMFEEALRALADDDFLTVTGKTVRLL

hide sequence

RefSeq Acc Id:

XP_013375704 ⟸ XM_013520250

- UniProtKB:

A0A8C2VUZ4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSPASTPSRRSSRRGWTTPAQTPRSEDARSSPSQRRRGEDSTSTGELQPMPTSPGADLQSPAA
QDALFSSPPQMHSSAIPLDFDISSPLTYGTPSSRVEGTPRSGVRGTPVRQRPDLGSARKGLQVD
LQSDGAAAEDVVASEQSLGQKLVIWGTDVNVATCKENFQRFLQRFIDPLAKEEESVGIDITEPV
YMQRLAEINVIGEPFLNVNCEHIKSFDKNLYRQLVCYPQEVIPTFDMAVNEIFFERYPDSILEH
QIQVRPFNALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCSHTTRVEMDRG
RIAEPCACGRCHTMHSMALIHNRSLFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKVQP
GDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVEL
LKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDP
GTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEF
DKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTL
LSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSQEQVEEEFLDMAVLKDYIAYAHSTIMPRLSE
EASQALIEAYVDMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSSKVEAIDVEEAKRLHREA
LKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRGQSD
IAITKDMFEEALRALADDDFLTVTGKTVRLL

hide sequence

RefSeq Acc Id:

XP_013375705 ⟸ XM_013520251

- UniProtKB:

A0A8C2VUZ4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSPASTPSRRSSRRGWTTPAQTPRSEDARSSPSQRRRGEDSTSTGELQPMPTSPGADLQSPAA
QDALFSSPPQMHSSAIPLDFDISSPLTYGTPSSRVEGTPRSGVRGTPVRQRPDLGSARKGLQVD
LQSDGAAAEDVVASEQSLGQKLVIWGTDVNVATCKENFQRFLQRFIDPLAKEEESVGIDITEPV
YMQRLAEINVIGEPFLNVNCEHIKSFDKNLYRQLVCYPQEVIPTFDMAVNEIFFERYPDSILEH
QIQVRPFNALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCSHTTRVEMDRG
RIAEPCACGRCHTMHSMALIHNRSLFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKVQP
GDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVEL
LKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDP
GTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEF
DKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTL
LSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSQEQVEEEFLDMAVLKDYIAYAHSTIMPRLSE
EASQALIEAYVDMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSSKVEAIDVEEAKRLHREA
LKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRGQSD
IAITKDMFEEALRALADDDFLTVTGKTVRLL

hide sequence

RefSeq Acc Id:

ENSCLAP00000020971 ⟸ ENSCLAT00000021172

RefSeq Acc Id:

ENSCLAP00000020970 ⟸ ENSCLAT00000021171

Protein Domains

MCM

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000014363	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000021171	ENTREZGENE
	ENSCLAT00000021171.1	UniProtKB/TrEMBL
	ENSCLAT00000021172	ENTREZGENE
	ENSCLAT00000021172.1	UniProtKB/TrEMBL
Gene3D-CATH	2.20.28.10	UniProtKB/TrEMBL
	2.40.50.140	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
	mini-chromosome maintenance (MCM) complex, chain A, domain 1	UniProtKB/TrEMBL
InterPro	MCM	UniProtKB/TrEMBL
	MCM_4	UniProtKB/TrEMBL
	MCM_CS	UniProtKB/TrEMBL
	MCM_dom	UniProtKB/TrEMBL
	MCM_lid	UniProtKB/TrEMBL
	MCM_N	UniProtKB/TrEMBL
	MCM_OB	UniProtKB/TrEMBL
	NA-bd_OB-fold	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
NCBI Gene	Mcm4	ENTREZGENE
PANTHER	PTHR11630	UniProtKB/TrEMBL
	PTHR11630:SF66	UniProtKB/TrEMBL
Pfam	MCM	UniProtKB/TrEMBL
	MCM4_WHD	UniProtKB/TrEMBL
	MCM_lid	UniProtKB/TrEMBL
	MCM_N	UniProtKB/TrEMBL
	MCM_OB	UniProtKB/TrEMBL
PRINTS	MCMFAMILY	UniProtKB/TrEMBL
	MCMPROTEIN4	UniProtKB/TrEMBL
PROSITE	MCM_1	UniProtKB/TrEMBL
	MCM_2	UniProtKB/TrEMBL
SMART	MCM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50249	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8C2VUZ4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM