Symbol:
Tbx15
Name:
T-box transcription factor 15
RGD ID:
9017690
Description:
ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Cousin Syndrome (ortholog); Craniofacial Abnormalities (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription repressor complex (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
T-box 15; T-box transcription factor TBX15
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955435 21,872,201 - 21,993,772 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955435 21,874,154 - 21,993,510 (-) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Tbx15 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955435 21,872,201 - 21,993,772 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955435 21,874,154 - 21,993,510 (-) NCBI ChiLan1.0 ChiLan1.0
TBX15 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 118,883,047 - 118,989,510 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 118,883,046 - 118,989,556 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 119,425,670 - 119,532,133 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 119,227,189 - 119,333,702 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 119,137,707 - 119,244,221 NCBI Celera 1 117,656,516 - 117,763,011 (-) NCBI Celera Cytogenetic Map 1 p12 NCBI HuRef 1 117,284,782 - 117,391,248 (-) NCBI HuRef CHM1_1 1 119,540,937 - 119,647,437 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 118,896,253 - 119,002,693 (-) NCBI T2T-CHM13v2.0
Tbx15 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 99,147,671 - 99,261,576 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 99,147,697 - 99,261,575 (+) Ensembl GRCm39 Ensembl GRCm38 3 99,240,348 - 99,354,260 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 99,240,381 - 99,354,259 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 99,057,683 - 99,158,183 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 99,377,677 - 99,483,320 (+) NCBI MGSCv36 mm8 Celera 3 101,519,902 - 101,565,343 (+) NCBI Celera Cytogenetic Map 3 F2.2 NCBI cM Map 3 43.03 NCBI
Tbx15 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 189,265,373 - 189,376,466 (+) NCBI GRCr8 mRatBN7.2 2 186,576,650 - 186,687,748 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 186,576,676 - 186,687,663 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 194,242,381 - 194,346,970 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 192,056,074 - 192,161,040 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 186,874,659 - 186,979,606 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 201,289,042 - 201,390,752 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 201,289,357 - 201,390,745 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 220,754,497 - 220,855,862 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 194,015,902 - 194,069,012 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 2 193,899,549 - 194,032,556 (+) NCBI Celera 2 179,111,401 - 179,157,133 (+) NCBI Celera Cytogenetic Map 2 q34 NCBI
TBX15 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 111,507,196 - 111,625,489 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 111,111,200 - 111,216,427 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 83,556,763 - 83,663,453 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 118,554,476 - 118,659,379 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 118,553,638 - 118,659,379 (+) Ensembl panpan1.1 panPan2
TBX15 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 17 56,079,739 - 56,190,417 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 17 56,081,411 - 56,204,192 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 17 55,728,743 - 55,839,376 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 17 56,952,138 - 57,062,859 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 17 56,953,811 - 57,077,185 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 17 55,989,587 - 56,099,313 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 17 56,021,008 - 56,131,283 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 17 56,610,873 - 56,721,034 (-) NCBI UU_Cfam_GSD_1.0
Tbx15 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405058 10,635,685 - 10,743,606 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936627 3,745,287 - 3,853,309 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936627 3,745,399 - 3,852,861 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
TBX15
TBX15 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 14,762,073 - 14,870,417 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 14,818,525 - 14,871,196 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666038 17,429,839 - 17,537,813 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Tbx15
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000012156 ⟹ ENSCLAP00000012015
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955435 21,872,201 - 21,993,772 (-) Ensembl
RefSeq Acc Id:
XM_005389071 ⟹ XP_005389128
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955435 21,874,154 - 21,993,510 (-) NCBI
Sequence:
TTCCTCCCCCCTCCCTCTCCCTCACCCCTCGGACGGGAGCGCACTGCCTGCCCCCTGTTCCTTGGGAAGGGAGGAATTTAGGGGGGATAAAAAGTTTCCCAGAAGTTTGGATCAGAGAAAGAACGGGA
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RefSeq Acc Id:
XM_005389072 ⟹ XP_005389129
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955435 21,874,154 - 21,944,751 (-) NCBI
Sequence:
GACAGAGCAGAGTCTTATGGGGAGGAGGGCAGGAGCAATATTGGCAAGAAAATCTTGCTGCCTCGGCGATGCTACCACTCCTTCAGAGGGCAACAGACATGCAAGAACACACCAACTATTTTAGAAGC
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RefSeq Acc Id:
XP_005389128 ⟸ XM_005389071
- Peptide Label:
isoform X1
- UniProtKB:
A0A8C2VFN8 (UniProtKB/TrEMBL)
- Sequence:
MSERRRSAVALSSRAHAFSVEALIGSNKKRKLRDWEEKGLDLSMEALSPAGPLADAEDAAAHGLEPHPDSEQSTGSDSEVLTERTSCSFSTHTDLATGAAGPVPATMSSMEEIQVELQCADLWKRFHD
hide sequence
RefSeq Acc Id:
XP_005389129 ⟸ XM_005389072
- Peptide Label:
isoform X2
- Sequence:
MLQDSEQSTGSDSEVLTERTSCSFSTHTDLATGAAGPVPATMSSMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVP
hide sequence
Ensembl Acc Id:
ENSCLAP00000012015 ⟸ ENSCLAT00000012156
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2019-06-11
Tbx15
T-box transcription factor 15
Tbx15
T-box 15
Symbol and/or name change
5135510 APPROVED
