Decr1 (2,4-dienoyl-CoA reductase 1) - Rat Genome Database

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Gene: Decr1 (2,4-dienoyl-CoA reductase 1) Chinchilla lanigera
Analyze
Symbol: Decr1
Name: 2,4-dienoyl-CoA reductase 1
RGD ID: 9010363
Description: ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); identical protein binding (ortholog); NADPH binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH 2,4-Dienoyl-CoA Reductase Deficiency (ortholog); genetic disease (ortholog); lipid metabolism disorder (ortholog); FOUND IN catalytic complex (ortholog); cytosol (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 2,4-dienoyl CoA reductase 1, mitochondrial; 2,4-dienoyl-CoA reductase 1, mitochondrial; 2,4-dienoyl-CoA reductase, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554176,893,231 - 6,931,754 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554176,893,231 - 6,931,754 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Decr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554176,893,231 - 6,931,754 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554176,893,231 - 6,931,754 (+)NCBIChiLan1.0ChiLan1.0
DECR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38890,001,477 - 90,053,633 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl890,001,405 - 90,053,633 (+)EnsemblGRCh38hg38GRCh38
GRCh37891,013,705 - 91,065,861 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36891,082,756 - 91,133,403 (+)NCBINCBI36Build 36hg18NCBI36
Build 34891,082,755 - 91,133,403NCBI
Celera887,208,502 - 87,259,149 (+)NCBICelera
Cytogenetic Map8q21.3NCBI
HuRef886,223,894 - 86,274,542 (+)NCBIHuRef
CHM1_1891,054,504 - 91,105,151 (+)NCBICHM1_1
T2T-CHM13v2.0891,125,148 - 91,177,304 (+)NCBIT2T-CHM13v2.0
Decr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39415,917,240 - 15,945,377 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl415,917,240 - 15,945,507 (-)EnsemblGRCm39 Ensembl
GRCm38415,917,240 - 15,945,377 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl415,917,240 - 15,945,507 (-)EnsemblGRCm38mm10GRCm38
MGSCv37415,844,387 - 15,872,654 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36415,844,387 - 15,872,654 (-)NCBIMGSCv36mm8
Celera415,720,515 - 15,748,774 (-)NCBICelera
Cytogenetic Map4A2NCBI
cM Map46.66NCBI
Decr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8534,208,195 - 34,236,074 (-)NCBIGRCr8
mRatBN7.2529,411,172 - 29,439,054 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl529,411,172 - 29,439,018 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx531,567,474 - 31,595,241 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0533,160,140 - 33,187,907 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0533,120,325 - 33,148,092 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0529,573,893 - 29,601,731 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl529,573,898 - 29,601,748 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0534,253,236 - 34,280,749 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4530,492,196 - 30,520,172 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1530,492,195 - 30,520,172 (-)NCBI
Celera528,616,707 - 28,644,572 (-)NCBICelera
Cytogenetic Map5q13NCBI
DECR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27107,394,558 - 107,461,629 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1882,934,216 - 83,001,276 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0886,690,816 - 86,755,379 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1888,642,676 - 88,693,224 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl888,642,172 - 88,693,224 (+)Ensemblpanpan1.1panPan2
DECR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12935,495,348 - 35,544,955 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2935,495,261 - 35,544,955 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2935,646,866 - 35,697,851 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02935,692,661 - 35,742,310 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2935,692,704 - 35,744,794 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12935,684,839 - 35,729,541 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02935,703,896 - 35,747,852 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02936,138,067 - 36,183,640 (+)NCBIUU_Cfam_GSD_1.0
Decr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530343,936,906 - 43,975,997 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365443,816,653 - 3,853,632 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365443,816,543 - 3,853,288 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DECR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl446,731,360 - 46,767,422 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1446,731,359 - 46,767,427 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2451,207,727 - 51,243,866 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DECR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1885,086,843 - 85,129,267 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl885,086,874 - 85,129,160 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603955,747,223 - 55,792,311 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Decr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247441,963,825 - 2,003,643 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247441,965,605 - 2,003,299 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000014131   ⟹   ENSCLAP00000013974
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554176,893,231 - 6,931,754 (+)Ensembl
RefSeq Acc Id: XM_005381763   ⟹   XP_005381820
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554176,893,231 - 6,931,754 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005381820 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000013974
  ENSCLAP00000013974.1
Reference Protein Sequences
RefSeq Acc Id: XP_005381820   ⟸   XM_005381763
- UniProtKB: A0A8C2VHB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000013974   ⟸   ENSCLAT00000014131


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000009666 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000014131 ENTREZGENE
  ENSCLAT00000014131.1 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro NAD(P)-bd_dom_sf UniProtKB/TrEMBL
  SDR_fam UniProtKB/TrEMBL
NCBI Gene Decr1 ENTREZGENE
PANTHER 2,4-DIENOYL-COA REDUCTASE [(3E)-ENOYL-COA-PRODUCING], MITOCHONDRIAL UniProtKB/TrEMBL
  SHORT-CHAIN DEHYDROGENASE/REDUCTASE UniProtKB/TrEMBL
Pfam adh_short_C2 UniProtKB/TrEMBL
PRINTS GDHRDH UniProtKB/TrEMBL
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
UniProt A0A8C2VHB4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-12-13 Decr1  2,4-dienoyl-CoA reductase 1    2,4-dienoyl-CoA reductase 1, mitochondrial  Symbol and/or name change 5135510 APPROVED
2016-08-16 Decr1  2,4-dienoyl-CoA reductase 1, mitochondrial    2,4-dienoyl CoA reductase 1, mitochondrial  Symbol and/or name change 5135510 APPROVED