Kiss1 (KiSS-1 metastasis suppressor) - Rat Genome Database

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Gene: Kiss1 (KiSS-1 metastasis suppressor) Chinchilla lanigera
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Symbol: Kiss1
Name: KiSS-1 metastasis suppressor
RGD ID: 9008896
Description: ENCODES a protein that exhibits kisspeptin receptor binding (ortholog); INVOLVED IN decidualization (ortholog); G protein-coupled receptor signaling pathway (ortholog); generation of ovulation cycle rhythm (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Neoplasms (ortholog); Delayed Puberty (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular space (ortholog); neuronal cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: KiSS-1 metastasis-suppressor; metastasis-suppressor KiSS-1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540640,043,133 - 40,045,386 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540640,043,139 - 40,045,973 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Kiss1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540640,043,133 - 40,045,386 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540640,043,139 - 40,045,973 (-)NCBIChiLan1.0ChiLan1.0
KISS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381204,190,341 - 204,196,491 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1204,190,341 - 204,196,491 (-)EnsemblGRCh38hg38GRCh38
GRCh371204,159,469 - 204,165,619 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361202,426,092 - 202,432,242 (-)NCBINCBI36Build 36hg18NCBI36
Build 341200,891,126 - 200,897,271NCBI
Celera1177,294,719 - 177,301,077 (-)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1175,324,487 - 175,330,608 (-)NCBIHuRef
CHM1_11205,583,149 - 205,589,536 (-)NCBICHM1_1
T2T-CHM13v2.01203,454,485 - 203,461,086 (-)NCBIT2T-CHM13v2.0
Kiss1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391133,249,625 - 133,257,460 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1133,254,950 - 133,257,460 (+)EnsemblGRCm39 Ensembl
GRCm39 Ensembl1133,237,565 - 133,257,460 (+)EnsemblGRCm39 Ensembl
GRCm381133,321,887 - 133,329,722 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1133,321,875 - 133,329,901 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1133,309,827 - 133,329,722 (+)EnsemblGRCm38mm10GRCm38
MGSCv371135,223,789 - 135,226,299 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361135,154,758 - 135,157,263 (+)NCBIMGSCv36mm8
Celera1135,939,680 - 135,942,194 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map157.91NCBI
Kiss1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81347,327,159 - 47,332,759 (+)NCBIGRCr8
mRatBN7.21344,775,106 - 44,780,707 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1344,774,823 - 44,780,612 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1347,388,122 - 47,390,621 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01348,676,226 - 48,678,725 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01345,934,083 - 45,936,581 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01350,529,506 - 50,537,603 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1350,529,510 - 50,535,389 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01355,582,365 - 55,590,432 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41346,244,786 - 46,247,288 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11346,258,828 - 46,261,331 (+)NCBI
Celera1345,110,972 - 45,113,474 (+)NCBICelera
Cytogenetic Map13q13NCBI
KISS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2145,178,903 - 45,187,434 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1145,144,115 - 45,152,454 (+)NCBINHGRI_mPanPan1
KISS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.138768,333 - 774,328 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl38768,585 - 773,382 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha38863,956 - 869,800 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.038763,801 - 769,645 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.138760,344 - 766,184 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0381,151,734 - 1,157,575 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0381,351,942 - 1,357,788 (-)NCBIUU_Cfam_GSD_1.0
Kiss1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934471,346,799 - 71,352,256 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936567584,443 - 586,837 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936567584,443 - 595,045 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KISS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12525,151,642 - 25,159,723 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605525,913,552 - 25,920,197 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiss1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248076,803,265 - 6,805,433 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248076,800,144 - 6,805,555 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000025200   ⟹   ENSCLAP00000024957
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540640,043,133 - 40,045,386 (-)Ensembl
RefSeq Acc Id: XM_005375288   ⟹   XP_005375345
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540640,043,139 - 40,045,973 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005375345 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000024957
  ENSCLAP00000024957.1
RefSeq Acc Id: XP_005375345   ⟸   XM_005375288
- UniProtKB: A0A8C2W483 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000024957   ⟸   ENSCLAT00000025200


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000017136 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000025200 ENTREZGENE
  ENSCLAT00000025200.1 UniProtKB/TrEMBL
InterPro Metastasis-suppressor_KiSS-1 UniProtKB/TrEMBL
NCBI Gene Kiss1 ENTREZGENE
PANTHER METASTASIS-SUPPRESSOR KISS-1 UniProtKB/TrEMBL
  PTHR16955 UniProtKB/TrEMBL
Pfam Kisspeptin UniProtKB/TrEMBL
UniProt A0A8C2W483 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-01-09 Kiss1  KiSS-1 metastasis suppressor    KiSS-1 metastasis-suppressor  Symbol and/or name change 5135510 APPROVED