Aif1l (allograft inflammatory factor 1 like)

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Gene: Aif1l (allograft inflammatory factor 1 like) Chinchilla lanigera

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Symbol:

Aif1l

Name:

allograft inflammatory factor 1 like

RGD ID:

8964248

Description:

ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2K (ortholog); breast cancer (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); focal adhesion (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

allograft inflammatory factor 1-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	936,889 - 954,667 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	936,889 - 954,667 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive limb-girdle muscular dystrophy type 2K (ISO)

breast cancer (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

primary coenzyme Q10 deficiency 7 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

actin cytoskeleton (ISO)

actin filament (ISO)

focal adhesion (ISO)

protein-containing complex (ISO)

Molecular Function

actin filament binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Aif1l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	936,889 - 954,667 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	936,889 - 954,667 (+)	NCBI	ChiLan1.0	ChiLan1.0

AIF1L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	131,096,531 - 131,123,144 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	131,096,476 - 131,123,152 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	133,971,918 - 133,998,531 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	132,961,733 - 132,988,360 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	131,001,465 - 131,028,093	NCBI
Celera	9	104,510,955 - 104,537,611 (+)	NCBI		Celera
Cytogenetic Map	9	q34.12-q34.13	NCBI
HuRef	9	103,462,597 - 103,489,133 (+)	NCBI		HuRef
CHM1_1	9	134,121,047 - 134,147,670 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	143,304,798 - 143,331,382 (+)	NCBI		T2T-CHM13v2.0

Aif1l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	31,840,315 - 31,863,454 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	31,840,151 - 31,863,454 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	31,950,303 - 31,973,442 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	31,950,139 - 31,973,442 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	31,805,823 - 31,828,962 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	31,772,312 - 31,795,451 (+)	NCBI		MGSCv36	mm8
Celera	2	31,653,266 - 31,676,512 (+)	NCBI		Celera
Cytogenetic Map	2	B	NCBI
cM Map	2	21.95	NCBI

Aif1l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	35,627,239 - 35,651,793 (+)	NCBI		GRCr8
mRatBN7.2	3	15,229,476 - 15,254,033 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	15,229,524 - 15,254,023 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	18,302,434 - 18,326,985 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	26,887,419 - 26,911,975 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	25,134,603 - 25,159,186 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	9,237,944 - 9,262,628 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	9,237,944 - 9,262,628 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	14,598,261 - 14,622,945 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	11,053,196 - 11,078,079 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	10,945,778 - 10,972,062 (+)	NCBI
Celera	3	9,976,750 - 10,001,583 (+)	NCBI		Celera
Cytogenetic Map	3	p12	NCBI

AIF1L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	8,228,896 - 8,255,509 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	8,231,238 - 8,257,851 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	102,218,242 - 102,244,846 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	130,865,394 - 130,891,744 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	130,863,031 - 130,891,744 (+)	Ensembl	panpan1.1		panPan2

AIF1L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	52,944,925 - 52,966,953 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	52,947,570 - 52,966,894 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	52,145,653 - 52,167,685 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	53,846,023 - 53,868,058 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	53,846,023 - 53,868,071 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	52,623,528 - 52,645,555 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	52,944,014 - 52,966,040 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	53,037,079 - 53,059,133 (-)	NCBI		UU_Cfam_GSD_1.0

Aif1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	198,193,397 - 198,211,193 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	17,961,854 - 17,979,749 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	17,961,922 - 17,979,721 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AIF1L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	271,072,734 - 271,102,803 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	271,075,376 - 271,099,984 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	305,102,354 - 305,127,760 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AIF1L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	7,016,619 - 7,043,663 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	7,016,398 - 7,043,575 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666079	8,457,744 - 8,484,869 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Aif1l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	4,739,793 - 4,757,280 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	4,739,886 - 4,757,291 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005408351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005408353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01066837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCQ01004723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000006067 ⟹ ENSCLAP00000005964

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955513	936,889 - 954,667 (+)	Ensembl

Ensembl Acc Id:

ENSCLAT00000006068 ⟹ ENSCLAP00000005965

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955513	937,014 - 952,021 (+)	Ensembl

RefSeq Acc Id:

XM_005408351 ⟹ XP_005408408

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955513	941,321 - 954,667 (+)	NCBI

Sequence:

show sequence

GGCGTGGACGCAGTGTCCACATGGGGCCCCGGAGCTGCCCTGGGGAATATGAGCCTGCTGTCCT
GCTGGGGACAGGTTACAGGTTCCTGCTGCTCGCCAGCGCCAGGCCCGGCACTTGCGGCCTGGCC
CTGGCCCATTAAGAGCCTCCGGGCTGCGTCAGAGGCCTCGGTGCCCTGGCATGGTGCTGCCTGT
TTGGGGGCTCCTGCCTAGGGCATCGGTGCCAGTCCCTTGGATGGCCTCCAGGATGGTGATCTCC
GCCCACCCCAAAATTCTGCTGCAGCTGATACAAAAAGACCAGCCTGGAGGGCCAGGAGCAAGGG
TCCGAGAGAAGGTCCTGGAGGAGTTCCTTTGCGACCAGAAGTACAGCGATGAGGAGAACCTGCC
GGAGAAGCTGGCGGCCTTCAAAGAGAAGTACATGGAGTTTGACCTGAACAACGAGGGTGAGATT
GACCTGATGTCTCTGAAGAGGATGATGGAGAAGCTGGGGGTGCCCAAGACCCACCTGGAGATGA
AGAAGATGATCTCAGAGGTGACGGGCGGCGTAAGCGATACCATCTCCTACCGAGACTTTGTGAA
CATGATGCTGGGGAAGCGGTCAGCGGTCCTCAAGCTAGTCATGATGTTTGAAGGCAAAGCCAAC
GAGAGCGGCCCCAAGCCGGCCGGACCCCCTCCGGAGAGAGACATTTCGAGCCTGCCCTGAGGAC
CCAGGCCTCCAGCCCGCCCCGCCCGGTCTCCCTGCCCTTCTTTCCTGACTCCTTGGGATTTGTC
CCACTCTGGCTGCTGTGGGCTTGTGTGTTTACTTATCAATCTCTTTGTAAAGCACAAATTATCT
GCCTTGAAGGGCTCTGGGTTCGGGACTCCTGGGCCCCAGGTTCCCCCCATTCCCTGTCTTTTTC
CTGCCTTTTCCCAGCCTTGTGCAGAAGGGCTGATACCAAACCAAAAACCAGCGAGGGCGGGGCC
GGGGCAGGGAGGCCGGCAACGTGCAGCCTGCGCCCAGAGGCGCTACCTCCGTCTTCCCAGAATG
CCTGTGGCCCCCGCCCACGGTCCCAGGAGCCTGGAGCAGAAAGGGCCTCTTTCGGGTTCCCTTG
CATAGCCCCACGCTTCTGATGTTCTTCGGTACCCTGGATGTGGCCACTCAGTGCCCCCACCCCA
CTGATCCCCCCTTGACACACCCCGCTGGTCGCCCCCAAGCGCGTGACACAGGTGGGAAGGAAGG
GAGCTTGGCTGTCCTTGCCCTTCAAGAAGGAACCGGAAGGAACCTTCTGGCCTTGCTCCCTGGC
CACACCTCCCTGTTAGAGAAGCGAAGGGCTTCAGAGGCAGAGGTGAGGCTAGGGGCCCCAGGGA
GGGTCAGCCAGGAAGTTCCAGCTTGCAGGGAGGACCCAGAGGGCCCCAGGATGGGAGACAGAGG
AGAATGCTTGTGCAAAAGCCAGCACCCCTGGTAGCCAGGAGTTAAATAACAGGTCGTCGTTCTG
ATCGCAAGCGCTTGAGGCCCGACTGCTTCCTCCCTTTCCCTTCCTACCCTGCTCGTGCTGTTCA
CACGTTCATGTACTCATTCAGCATATTTATTGAGCACCTATTATGAGCTTTAAGCCCTTCCACT
TTGCCCTGACCTGGGCTGTGTCCTCTGTCTCTCTAACTCACCTTTCCCATTCCAGTTGCTCAAA
ACCTTGAGCCTTGGGATTGGACCTAGCCACTTGTGCCCTTTGTTAGGGATTCAGGATTTCAGAG
CCCTCTTCGGCCCTGTAGGTGAGCTGGGCCCCCCCACTCTCACTGTGATGGCCCACTGGGGTCC
ACTGCCTTGCCCAAGGTCAGGGGTGAATCTGGAGACAGATGAGCCTGCCCACGCCTCACCTCTG
CTCTGGCTGCCTTAGCGTTGCAAGCAGGGAAGCGGGCCGAGGGCCAAAGTCCTGGGCCAGCACT
CAGGAAGGCTTCTCTCACCCTGAAGGCCATGGGCTTCCCAGTCAGCGTCAGGGCTGGGTGAGGG
CAGGCCTGCTCTGCAGTTCTGGCTTCCTACAGCTTCTAGGCCCTGGCTCCGGGACCTGCTCCTC
AGAACCCGTGTAGGCAAGTGTCAGACAGTCCCGACTGTACCTGTGTTCTGGGATCCTTATCTGT
GCCCTCAGGACATAGATATGCTCATTCACTGCATATACTTATTAAGCTCCTGCTATAGGCCAAG
AGCTCATAACTCAGCAGTCAAACAGACAGCTCGTGGAATTTACCGTGCAGTGGGGAACAAAGAC
CCAGTGACACAGGGACGAATATTAGGAAGTGGGGGAGGCCCAAGGGTGATCGCCTTAGACAGGG
GCAAGAGTCTTGCAGAAACTTTGACAAAAGCTTATGGACAGGGCAACTCACTTGGGATCCTTCC
TGTCCCCCAGGAGCTATTCCTGTTCCCCAATAAATTTTCTTTTTTTTTTTAAACCTTCAGAGCT
GGGGCCTCTTGGAGCTACTCTGGGTTTCCTGTGGCTCCTGTAGACCCACAGTCAAGGCCCAGGG
TGCTGCCCCAGTAGCAGCTTACGGGAGTAAAACAGGTAGGACGTAAGGACATGGCCAAGTCACA
CCAGTCCTCTGGTCTCAGCCAGCTAAAGAGCAAGATCGTGTGGGTATAACTGGCTGACCCTGTC
TGAGGGATACACAGGCCTAGTTGAAGTTTAAACCCCAGCACAACATTCCTCCCTGTAAATATAA
AATCCTGCTGCCTACCCCCACCTACTCCTACCTTTGTGGAGCCTTTTTTTTTTTTTTGAGACAG
ATTAGCAACTGCCTCCTCTCTTCCTGAAGGAAGATAAGCTTTTTTTTTTTTTTTGATTCCCCAT
CCCATTCAGTGTGGCTGTTCCTCAGAGAGACGAAGAACCAACCAGGCTTATTTCAGTGGGTTCC
ACAGTCTGAGATATGGAAAAGAGAGGAAATGGAAAACCCCTTCTGTCACTGCAGGGGATGAGGG
AACCCCATCAGCTCCTTCACCAGCTCTTAGAACTCAGCCCTGGGGAAACAGACTCAATGTGAGC
CCTGGACAGGGGGTCTGTGTGTATTTTGGGTTGTGGCTGCTGGCCCTTGGCCTCATTTCTCTAG
CTAAGGGCTCCACTTTCTTGGACCTTCAACTATCTTCTTTCTGAAAAAGACCAAATCTAACTAA
TGTAACCAGCAACGTGGGGACTGCTAAGTATGGCTTTGTCCCCTTGATTCAAAAGGAAAGTTTG
TCAGGCAAATTCATGTGACTGAAGTTTGTGTGTGTGTGTGTGCACGTGTGCATGTGTGCACATG
CCTGCACTGGGCGGGTGTGCATGGAAGTGTGTGGGGGGTGGGGTATCAGCTCTACAGATTGGAA
TAAACCAGACAAACTGAC

hide sequence

RefSeq Acc Id:

XM_005408353 ⟹ XP_005408410

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955513	936,889 - 954,667 (+)	NCBI

Sequence:

show sequence

TCCTCCGCCCCTCAGCCCTGCCGCGCGCCACACGCCCCAGCCCGGGCCGGCGCGCGTCTCTCGT
CCTGTGTCCTGTCCCTCGCTGCGGCTGCGAAGCCCCAGAAGGCGGGAGCCCGGCGCGCGCCATG
TCGGTCGCGCTCAGCAACAGGTTCCAAGGAGGGAAGGCGTTCGGCTTGCTCAAAGCCCAGCAGG
AGAAGAGGCTGGCGGAGATCAACCGGGAGTTCCTTTGCGACCAGAAGTACAGCGATGAGGAGAA
CCTGCCGGAGAAGCTGGCGGCCTTCAAAGAGAAGTACATGGAGTTTGACCTGAACAACGAGGGT
GAGATTGACCTGATGTCTCTGAAGAGGATGATGGAGAAGCTGGGGGTGCCCAAGACCCACCTGG
AGATGAAGAAGATGATCTCAGAGGTGACGGGCGGCGTAAGCGATACCATCTCCTACCGAGACTT
TGTGAACATGATGCTGGGGAAGCGGTCAGCGGTCCTCAAGCTAGTCATGATGTTTGAAGGCAAA
GCCAACGAGAGCGGCCCCAAGCCGGCCGGACCCCCTCCGGAGAGAGACATTTCGAGCCTGCCCT
GAGGACCCAGGCCTCCAGCCCGCCCCGCCCGGTCTCCCTGCCCTTCTTTCCTGACTCCTTGGGA
TTTGTCCCACTCTGGCTGCTGTGGGCTTGTGTGTTTACTTATCAATCTCTTTGTAAAGCACAAA
TTATCTGCCTTGAAGGGCTCTGGGTTCGGGACTCCTGGGCCCCAGGTTCCCCCCATTCCCTGTC
TTTTTCCTGCCTTTTCCCAGCCTTGTGCAGAAGGGCTGATACCAAACCAAAAACCAGCGAGGGC
GGGGCCGGGGCAGGGAGGCCGGCAACGTGCAGCCTGCGCCCAGAGGCGCTACCTCCGTCTTCCC
AGAATGCCTGTGGCCCCCGCCCACGGTCCCAGGAGCCTGGAGCAGAAAGGGCCTCTTTCGGGTT
CCCTTGCATAGCCCCACGCTTCTGATGTTCTTCGGTACCCTGGATGTGGCCACTCAGTGCCCCC
ACCCCACTGATCCCCCCTTGACACACCCCGCTGGTCGCCCCCAAGCGCGTGACACAGGTGGGAA
GGAAGGGAGCTTGGCTGTCCTTGCCCTTCAAGAAGGAACCGGAAGGAACCTTCTGGCCTTGCTC
CCTGGCCACACCTCCCTGTTAGAGAAGCGAAGGGCTTCAGAGGCAGAGGTGAGGCTAGGGGCCC
CAGGGAGGGTCAGCCAGGAAGTTCCAGCTTGCAGGGAGGACCCAGAGGGCCCCAGGATGGGAGA
CAGAGGAGAATGCTTGTGCAAAAGCCAGCACCCCTGGTAGCCAGGAGTTAAATAACAGGTCGTC
GTTCTGATCGCAAGCGCTTGAGGCCCGACTGCTTCCTCCCTTTCCCTTCCTACCCTGCTCGTGC
TGTTCACACGTTCATGTACTCATTCAGCATATTTATTGAGCACCTATTATGAGCTTTAAGCCCT
TCCACTTTGCCCTGACCTGGGCTGTGTCCTCTGTCTCTCTAACTCACCTTTCCCATTCCAGTTG
CTCAAAACCTTGAGCCTTGGGATTGGACCTAGCCACTTGTGCCCTTTGTTAGGGATTCAGGATT
TCAGAGCCCTCTTCGGCCCTGTAGGTGAGCTGGGCCCCCCCACTCTCACTGTGATGGCCCACTG
GGGTCCACTGCCTTGCCCAAGGTCAGGGGTGAATCTGGAGACAGATGAGCCTGCCCACGCCTCA
CCTCTGCTCTGGCTGCCTTAGCGTTGCAAGCAGGGAAGCGGGCCGAGGGCCAAAGTCCTGGGCC
AGCACTCAGGAAGGCTTCTCTCACCCTGAAGGCCATGGGCTTCCCAGTCAGCGTCAGGGCTGGG
TGAGGGCAGGCCTGCTCTGCAGTTCTGGCTTCCTACAGCTTCTAGGCCCTGGCTCCGGGACCTG
CTCCTCAGAACCCGTGTAGGCAAGTGTCAGACAGTCCCGACTGTACCTGTGTTCTGGGATCCTT
ATCTGTGCCCTCAGGACATAGATATGCTCATTCACTGCATATACTTATTAAGCTCCTGCTATAG
GCCAAGAGCTCATAACTCAGCAGTCAAACAGACAGCTCGTGGAATTTACCGTGCAGTGGGGAAC
AAAGACCCAGTGACACAGGGACGAATATTAGGAAGTGGGGGAGGCCCAAGGGTGATCGCCTTAG
ACAGGGGCAAGAGTCTTGCAGAAACTTTGACAAAAGCTTATGGACAGGGCAACTCACTTGGGAT
CCTTCCTGTCCCCCAGGAGCTATTCCTGTTCCCCAATAAATTTTCTTTTTTTTTTTAAACCTTC
AGAGCTGGGGCCTCTTGGAGCTACTCTGGGTTTCCTGTGGCTCCTGTAGACCCACAGTCAAGGC
CCAGGGTGCTGCCCCAGTAGCAGCTTACGGGAGTAAAACAGGTAGGACGTAAGGACATGGCCAA
GTCACACCAGTCCTCTGGTCTCAGCCAGCTAAAGAGCAAGATCGTGTGGGTATAACTGGCTGAC
CCTGTCTGAGGGATACACAGGCCTAGTTGAAGTTTAAACCCCAGCACAACATTCCTCCCTGTAA
ATATAAAATCCTGCTGCCTACCCCCACCTACTCCTACCTTTGTGGAGCCTTTTTTTTTTTTTTG
AGACAGATTAGCAACTGCCTCCTCTCTTCCTGAAGGAAGATAAGCTTTTTTTTTTTTTTTGATT
CCCCATCCCATTCAGTGTGGCTGTTCCTCAGAGAGACGAAGAACCAACCAGGCTTATTTCAGTG
GGTTCCACAGTCTGAGATATGGAAAAGAGAGGAAATGGAAAACCCCTTCTGTCACTGCAGGGGA
TGAGGGAACCCCATCAGCTCCTTCACCAGCTCTTAGAACTCAGCCCTGGGGAAACAGACTCAAT
GTGAGCCCTGGACAGGGGGTCTGTGTGTATTTTGGGTTGTGGCTGCTGGCCCTTGGCCTCATTT
CTCTAGCTAAGGGCTCCACTTTCTTGGACCTTCAACTATCTTCTTTCTGAAAAAGACCAAATCT
AACTAATGTAACCAGCAACGTGGGGACTGCTAAGTATGGCTTTGTCCCCTTGATTCAAAAGGAA
AGTTTGTCAGGCAAATTCATGTGACTGAAGTTTGTGTGTGTGTGTGTGCACGTGTGCATGTGTG
CACATGCCTGCACTGGGCGGGTGTGCATGGAAGTGTGTGGGGGGTGGGGTATCAGCTCTACAGA
TTGGAATAAACCAGACAAACTGAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005408408	(Get FASTA)	NCBI Sequence Viewer
	XP_005408410	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005964
	ENSCLAP00000005964.1
	ENSCLAP00000005965.1

RefSeq Acc Id:	XP_005408410 ⟸ XM_005408353
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UVM3 (UniProtKB/TrEMBL), A0A8C2V0T7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVALSNRFQGGKAFGLLKAQQEKRLAEINREFLCDQKYSDEENLPEKLAAFKEKYMEFDLNNE GEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFEG KANESGPKPAGPPPERDISSLP hide sequence

RefSeq Acc Id:	XP_005408408 ⟸ XM_005408351
- Peptide Label:	isoform X1
- Sequence:	show sequence MVLPVWGLLPRASVPVPWMASRMVISAHPKILLQLIQKDQPGGPGARVREKVLEEFLCDQKYSD EENLPEKLAAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISY RDFVNMMLGKRSAVLKLVMMFEGKANESGPKPAGPPPERDISSLP hide sequence

Ensembl Acc Id:

ENSCLAP00000005965 ⟸ ENSCLAT00000006068

Ensembl Acc Id:

ENSCLAP00000005964 ⟸ ENSCLAT00000006067

Protein Domains

Allograft inflammatory factor 1-like EF-hand EF-hand

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000004225	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000006067	ENTREZGENE
	ENSCLAT00000006067.1	UniProtKB/TrEMBL
	ENSCLAT00000006068.1	UniProtKB/TrEMBL
Gene3D-CATH	EF-hand	UniProtKB/TrEMBL
InterPro	AIF-1_EF_pair	UniProtKB/TrEMBL
	AIF1/AIF1L	UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
NCBI Gene	Aif1l	ENTREZGENE
PANTHER	PTHR10356	UniProtKB/TrEMBL
	PTHR10356:SF5	UniProtKB/TrEMBL
Pfam	AIF-1	UniProtKB/TrEMBL
PROSITE	EF_HAND_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
UniProt	A0A8C2UVM3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2V0T7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Aif1l	allograft inflammatory factor 1 like		allograft inflammatory factor 1-like	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar