Symbol:
Atp7b
Name:
ATPase copper transporting beta
RGD ID:
8922156
Description:
ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to copper ion (ortholog); cellular response to manganese ion (ortholog); circadian rhythm (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Anhaptoglobinemia (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
ATPase, Cu++ transporting, beta polypeptide; copper-transporting ATPase 2
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955431 5,229,126 - 5,269,616 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955431 5,228,395 - 5,297,120 (-) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Atp7b Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955431 5,229,126 - 5,269,616 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955431 5,228,395 - 5,297,120 (-) NCBI ChiLan1.0 ChiLan1.0
ATP7B Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 13 51,932,669 - 52,012,132 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 13 51,930,436 - 52,012,125 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 13 52,506,805 - 52,586,268 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 13 51,404,806 - 51,483,631 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 13 51,404,805 - 51,483,631 NCBI Celera 13 33,555,444 - 33,634,269 (-) NCBI Celera Cytogenetic Map 13 q14.3 NCBI HuRef 13 33,295,317 - 33,374,147 (-) NCBI HuRef CHM1_1 13 52,473,433 - 52,553,190 (-) NCBI CHM1_1 T2T-CHM13v2.0 13 51,147,339 - 51,226,948 (-) NCBI T2T-CHM13v2.0
Atp7b Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 8 22,482,799 - 22,550,347 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 8 22,482,801 - 22,550,321 (-) Ensembl GRCm39 Ensembl GRCm38 8 21,992,783 - 22,060,074 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 8 21,992,785 - 22,060,305 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 8 23,104,820 - 23,170,546 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 8 23,459,893 - 23,525,619 (-) NCBI MGSCv36 mm8 Celera 8 23,490,671 - 23,556,555 (-) NCBI Celera Cytogenetic Map 8 A2 NCBI cM Map 8 10.78 NCBI
Atp7b Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 16 76,654,725 - 76,726,092 (+) NCBI GRCr8 mRatBN7.2 16 69,952,286 - 70,024,404 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 16 69,951,778 - 70,023,636 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 16 75,225,956 - 75,297,317 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 16 78,664,533 - 78,736,202 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 16 73,913,825 - 73,985,530 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 16 74,865,516 - 74,944,935 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 16 74,865,516 - 74,945,286 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 16 74,495,179 - 74,575,822 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 16 74,607,988 - 74,680,080 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 16 74,608,239 - 74,679,614 (+) NCBI Celera 16 67,837,288 - 67,908,140 (+) NCBI Celera RH 3.4 Map 16 664.21 RGD Cytogenetic Map 16 q12.5 NCBI
ATP7B Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 14 53,366,970 - 53,447,808 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 13 52,012,774 - 52,091,309 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 13 33,063,698 - 33,144,528 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 13 51,808,491 - 51,888,488 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 13 51,810,555 - 51,851,839 (-) Ensembl panpan1.1 panPan2
ATP7B Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 22 162,474 - 225,599 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 22 191,888 - 225,266 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 22 227,530 - 260,908 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 22 144,381 - 208,578 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 22 163,718 - 208,552 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 22 95,838 - 129,431 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 22 145,387 - 179,042 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 22 163,429 - 197,022 (+) NCBI UU_Cfam_GSD_1.0
Atp7b Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404945 161,210,231 - 161,278,988 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936565 4,694,281 - 4,763,773 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936565 4,694,294 - 4,763,661 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
ATP7B Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 11 15,876,612 - 15,942,064 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 11 15,892,549 - 15,942,070 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 11 16,218,277 - 16,263,614 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
ATP7B Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 3 29,817,712 - 29,899,302 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 3 29,816,860 - 29,899,077 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666057 13,915,907 - 13,997,411 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Atp7b
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000007000 ⟹ ENSCLAP00000006888
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955431 5,229,126 - 5,269,616 (-) Ensembl
RefSeq Acc Id:
XM_005387611 ⟹ XP_005387668
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955431 5,228,395 - 5,277,923 (-) NCBI
Sequence:
TGCTGGGTGCAGGCGTGTGCGGGCCGTGCGCAGAGATATCCACAGCATCGCACAGCGGTGTGGTGAGAGGCTACTACCAGTTGGTGGGATGGATGTAGATCGGCAAAAGCAAACAGGTGCTCAGCGGT
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RefSeq Acc Id:
XM_005387612 ⟹ XP_005387669
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955431 5,229,126 - 5,297,120 (-) NCBI
Sequence:
AGGCGGTGCCGGCTGGCGGCGGTGAGCGTCCGGCCCGCGCGCCCCTCGCCCCTCACTGCCCCCCGGCTGGAGTGGCGCCTCGGTCCCGGACCCGAGGACCTGTTCCAGACCCCTCCGGCTGGAGTCGA
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RefSeq Acc Id:
XM_005387614 ⟹ XP_005387671
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955431 5,229,126 - 5,271,523 (-) NCBI
Sequence:
CTGCCCCGTGGCTGCATGAGGATTTGAGGGGACATGCAGACACAACCCATAACAACAGCATACCCAGAATGTTGTGTGTAGTCCAGGAACCATTGTTCCTGCTGCTCATGTCCTGCCTTCTTGGATCT
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RefSeq Acc Id:
XP_005387669 ⟸ XM_005387612
- Peptide Label:
isoform X2
- UniProtKB:
A0A8C2YL85 (UniProtKB/TrEMBL)
- Sequence:
MKQSFAFDNVGYEGGLDNVCPSPTITSTISVLGMTCQSCVKSIEGRISSLKGIVNIKVSLEQSNATVKYVPSVISLQQVCHQIGDMGFEASVVEGKAASWPSRTSSAQEAVVKLRVEGMTCQSCVSSI
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RefSeq Acc Id:
XP_005387668 ⟸ XM_005387611
- Peptide Label:
isoform X1
- UniProtKB:
A0A8C2YL85 (UniProtKB/TrEMBL)
- Sequence:
MTMAMEKAKAEVPQEPEQSFLANLNDPQVTLLSVRERWSFRRNPGARALSRPVSAEEGSCSPPS
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RefSeq Acc Id:
XP_005387671 ⟸ XM_005387614
- Peptide Label:
isoform X2
- UniProtKB:
A0A8C2YL85 (UniProtKB/TrEMBL)
- Sequence:
MKQSFAFDNVGYEGGLDNVCPSPTITSTISVLGMTCQSCVKSIEGRISSLKGIVNIKVSLEQSN
hide sequence
Ensembl Acc Id:
ENSCLAP00000006888 ⟸ ENSCLAT00000007000
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-08-03
Atp7b
ATPase copper transporting beta
ATPase, Cu++ transporting, beta polypeptide
Symbol and/or name change
5135510 APPROVED
