Symbol:
Pwwp2a
Name:
PWWP domain containing 2A
RGD ID:
8869129
Description:
ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H3K36me3 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); regulation of transcriptional start site selection at RNA polymerase II promoter (ortholog); FOUND IN nucleus (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
LOC102023876; PWWP domain-containing protein 2A; uncharacterized LOC102023876
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955408 14,025,964 - 14,051,149 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955408 14,007,982 - 14,051,149 (-) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Pwwp2a Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955408 14,025,964 - 14,051,149 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955408 14,007,982 - 14,051,149 (-) NCBI ChiLan1.0 ChiLan1.0
PWWP2A Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 5 160,044,316 - 160,119,450 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 5 160,061,801 - 160,119,450 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 5 159,502,889 - 159,546,457 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 5 159,435,467 - 159,479,030 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 5 155,534,450 - 155,578,003 (-) NCBI Celera Cytogenetic Map 5 q33.3 NCBI HuRef 5 154,597,226 - 154,640,986 (-) NCBI HuRef CHM1_1 5 158,935,909 - 158,979,466 (-) NCBI CHM1_1 T2T-CHM13v2.0 5 160,572,113 - 160,648,036 (-) NCBI T2T-CHM13v2.0
Pwwp2a Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 43,566,881 - 43,613,248 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 43,572,825 - 43,612,318 (+) Ensembl GRCm39 Ensembl GRCm38 11 43,681,125 - 43,722,633 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 43,681,998 - 43,721,491 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 43,495,500 - 43,536,135 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 43,525,378 - 43,566,056 (+) NCBI MGSCv36 mm8 Celera 11 48,308,136 - 48,348,710 (+) NCBI Celera Cytogenetic Map 11 B1.1 NCBI cM Map 11 25.81 NCBI
Pwwp2a Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 28,654,272 - 28,696,693 (+) NCBI GRCr8 mRatBN7.2 10 28,155,509 - 28,195,255 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 28,155,605 - 28,194,308 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 32,915,090 - 32,953,781 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 1,453,464 - 1,492,155 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 27,885,634 - 27,924,324 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 29,288,060 - 29,335,425 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 29,289,203 - 29,334,478 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 29,128,931 - 29,175,653 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 28,789,156 - 28,828,007 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 10 28,813,480 - 28,815,082 (+) NCBI Celera 10 27,646,254 - 27,683,715 (+) NCBI Celera Cytogenetic Map 10 q21 NCBI
PWWP2A Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 4 155,247,172 - 155,304,599 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 5 153,386,720 - 153,443,973 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 5 155,452,698 - 155,509,961 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 5 162,083,726 - 162,126,580 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 5 162,085,988 - 162,130,604 (-) Ensembl panpan1.1 panPan2
PWWP2A Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 4 50,558,972 - 50,596,546 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 4 50,453,374 - 50,490,652 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 4 50,994,006 - 51,031,276 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 4 50,993,644 - 51,031,271 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 4 50,802,291 - 50,839,748 (+) NCBI UMICH_Zoey_3.1 UU_Cfam_GSD_1.0 4 51,446,156 - 51,483,420 (+) NCBI UU_Cfam_GSD_1.0
Pwwp2a
PWWP2A Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 16 63,409,932 - 63,448,871 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 16 63,409,898 - 63,449,997 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 16 68,901,249 - 68,940,242 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
PWWP2A Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 23 62,428,936 - 62,490,904 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 23 62,460,139 - 62,490,803 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666034 15,116,595 - 15,181,271 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Pwwp2a
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000018076 ⟹ ENSCLAP00000017898
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955408 14,025,964 - 14,051,149 (-) Ensembl
RefSeq Acc Id:
XM_005376254 ⟹ XP_005376311
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,025,964 - 14,050,779 (-) NCBI
Sequence:
GAGTGCTGGGATTACAGGCGTGCGCCACCACACCCGGCTTGAACAGTAGGTTTTCATCTTTTGATTGAAAGTGGGTAAGGGCAGTGCGTTTAAACAGGTGAAGCAAGGTTTCCAGGCCGCAGTTAACC
hide sequence
RefSeq Acc Id:
XM_005376255 ⟹ XP_005376312
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,025,966 - 14,050,776 (-) NCBI
Sequence:
TGCTGGGATTACAGGCGTGCGCCACCACACCCGGCTTGAACAGTAGGTTTTCATCTTTTGATTG
hide sequence
RefSeq Acc Id:
XM_013508900 ⟹ XP_013364354
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,025,964 - 14,050,774 (-) NCBI
Sequence:
CTGGGATTACAGGCGTGCGCCACCACACCCGGCTTGAACAATGTGAAGTGCAGAGACTCCCACTCACGGCTTCCCATTCTGTTTCCTGCAACAGCACACACTGATGGTGTCTCGCCTGTTTGGAAATG
hide sequence
RefSeq Acc Id:
XM_013508906 ⟹ XP_013364360
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,025,964 - 14,051,149 (-) NCBI
Sequence:
CGCTTCCCCGCAGGCGGCTGTTCCGCGGCGGAGCGCCTTTTGCTCGTTTTAATGACAGCTTTAA
hide sequence
RefSeq Acc Id:
XM_013508913 ⟹ XP_013364367
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,025,964 - 14,050,779 (-) NCBI
Sequence:
GAGTGCTGGGATTACAGGCGTGCGCCACCACACCCGGCTTGAACAGTAGGTTTTCATCTTTTGA
hide sequence
RefSeq Acc Id:
XM_013508924 ⟹ XP_013364378
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,011,849 - 14,050,773 (-) NCBI
Sequence:
TGGGATTACAGGCGTGCGCCACCACACCCGGCTTGAACAGTAGGTTTTCATCTTTTGATTGAAAGTGGGTAAGGGCAGTGCGTTTAAACAGGTGAAGCAAGGTTTCCAGGCCGCAGTTAACCTTTTTA
hide sequence
RefSeq Acc Id:
XR_001232337
Type:
NON-CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,007,982 - 14,050,773 (-) NCBI
Sequence:
TGGGATTACAGGCGTGCGCCACCACACCCGGCTTGAACAGTAGGTTTTCATCTTTTGATTGAAA
hide sequence
RefSeq Acc Id:
XR_001232338
Type:
NON-CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,007,982 - 14,050,773 (-) NCBI
Sequence:
TGGGATTACAGGCGTGCGCCACCACACCCGGCTTGAACAGTAGGTTTTCATCTTTTGATTGAAA
hide sequence
RefSeq Acc Id:
XR_001232339
Type:
NON-CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955408 14,007,982 - 14,050,773 (-) NCBI
Sequence:
TGGGATTACAGGCGTGCGCCACCACACCCGGCTTGAACAGTAGGTTTTCATCTTTTGATTGAAAGTGGGTAAGGGCAGTGCGTTTAAACAGGTGAAGCAAGGTTTCCAGGCCGCAGTTAACCTTTTTA
hide sequence
RefSeq Acc Id:
XP_005376312 ⟸ XM_005376255
- Peptide Label:
isoform X2
- UniProtKB:
A0A8C2VMS9 (UniProtKB/TrEMBL)
- Sequence:
MKQFGPHGIPVTVFPKREYKDKPEAMQLQSHAFQDGTEVKREVNGAVPSAPCPVPPPEPSCTESLWASKPPPLFHAGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQV
hide sequence
RefSeq Acc Id:
XP_005376311 ⟸ XM_005376254
- Peptide Label:
isoform X1
- Sequence:
MKQEPGRLFPSGGRKGSARPCVMWTGALWDARCCPPVFGPHGIPVTVFPKREYKDKPEAMQLQS
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RefSeq Acc Id:
XP_013364378 ⟸ XM_013508924
- Peptide Label:
isoform X3
- Sequence:
MKQEPGRLFPSGGRKGSARPCVMWTGALWDARCCPPVFGPHGIPVTVFPKREYKDKPEAMQLQS
hide sequence
RefSeq Acc Id:
XP_013364360 ⟸ XM_013508906
- Peptide Label:
isoform X1
- Sequence:
MKQEPGRLFPSGGRKGSARPCVMWTGALWDARCCPPVFGPHGIPVTVFPKREYKDKPEAMQLQSHAFQDGTEVKREVNGAVPSAPCPVPPPEPSCTESLWASKPPPLFHAGAPYPPPLFIRDTYNQSI
hide sequence
RefSeq Acc Id:
XP_013364367 ⟸ XM_013508913
- Peptide Label:
isoform X1
- Sequence:
MKQEPGRLFPSGGRKGSARPCVMWTGALWDARCCPPVFGPHGIPVTVFPKREYKDKPEAMQLQSHAFQDGTEVKREVNGAVPSAPCPVPPPEPSCTESLWASKPPPLFHAGAPYPPPLFIRDTYNQSI
hide sequence
RefSeq Acc Id:
XP_013364354 ⟸ XM_013508900
- Peptide Label:
isoform X1
- Sequence:
MKQEPGRLFPSGGRKGSARPCVMWTGALWDARCCPPVFGPHGIPVTVFPKREYKDKPEAMQLQSHAFQDGTEVKREVNGAVPSAPCPVPPPEPSCTESLWASKPPPLFHAGAPYPPPLFIRDTYNQSI
hide sequence
Ensembl Acc Id:
ENSCLAP00000017898 ⟸ ENSCLAT00000018076
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2017-11-21
Pwwp2a
PWWP domain containing 2A
LOC102023876
uncharacterized LOC102023876
Data merged from RGD:8740675
737654 PROVISIONAL
