Ptpn4 (protein tyrosine phosphatase non-receptor type 4)

Gene: Ptpn4 (protein tyrosine phosphatase non-receptor type 4) Chinchilla lanigera

Analyze

Symbol:

Ptpn4

Name:

protein tyrosine phosphatase non-receptor type 4

RGD ID:

8834882

Description:

ENCODES a protein that exhibits glutamate receptor binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tyrosine-protein phosphatase non-receptor type 4

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955459	9,803,421 - 9,981,392 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytoplasm (ISO)

cytoplasmic side of plasma membrane (ISO)

membrane (ISO)

Molecular Function

glutamate receptor binding (ISO)

non-membrane spanning protein tyrosine phosphatase activity (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Ptpn4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955459	9,803,421 - 9,981,392 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI	ChiLan1.0	ChiLan1.0

PTPN4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	119,759,922 - 119,984,899 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	119,759,922 - 119,984,899 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	120,517,498 - 120,742,475 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	120,233,677 - 120,451,507 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	120,233,436 - 120,451,267	NCBI
Celera	2	113,842,942 - 114,061,903 (+)	NCBI		Celera
Cytogenetic Map	2	q14.2	NCBI
HuRef	2	112,841,586 - 113,066,878 (+)	NCBI		HuRef
CHM1_1	2	120,520,785 - 120,746,914 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	120,193,967 - 120,419,641 (+)	NCBI		T2T-CHM13v2.0

Ptpn4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	119,580,197 - 119,765,281 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	119,580,197 - 119,765,343 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	119,652,467 - 119,837,585 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	119,652,467 - 119,837,613 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	121,554,669 - 121,733,648 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	121,487,291 - 121,630,021 (-)	NCBI		MGSCv36	mm8
Celera	1	122,316,986 - 122,496,376 (-)	NCBI		Celera
Cytogenetic Map	1	E2.3	NCBI
cM Map	1	52.39	NCBI

Ptpn4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	33,324,808 - 33,504,957 (-)	NCBI		GRCr8
mRatBN7.2	13	30,772,012 - 30,952,340 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	30,776,682 - 30,952,170 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	33,353,328 - 33,533,288 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	34,641,168 - 34,821,122 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	31,915,258 - 32,095,209 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	35,678,240 - 35,858,414 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	35,678,240 - 35,858,390 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	40,792,728 - 40,972,784 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	32,430,875 - 32,611,163 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	32,475,262 - 32,484,043 (-)	NCBI
Celera	13	30,666,333 - 30,846,454 (-)	NCBI		Celera
Cytogenetic Map	13	q11	NCBI

PTPN4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	21,735,494 - 21,982,547 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	21,750,466 - 21,998,093 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	6,694,192 - 6,917,265 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	120,320,591 - 120,492,423 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	120,320,610 - 120,485,676 (+)	Ensembl	panpan1.1		panPan2

PTPN4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	19	30,079,221 - 30,285,126 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	19	30,086,832 - 30,241,064 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	19	30,335,314 - 30,541,476 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	19	31,454,630 - 31,662,707 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	19	31,461,882 - 31,663,169 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	19	30,140,713 - 30,349,797 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	19	30,310,819 - 30,517,448 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	19	31,493,639 - 31,702,636 (-)	NCBI		UU_Cfam_GSD_1.0

Ptpn4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	90,976,332 - 91,149,472 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	50,470,256 - 50,594,357 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936469	50,463,473 - 50,641,419 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PTPN4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	31,307,447 - 31,502,923 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	31,305,394 - 31,502,978 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	36,235,035 - 36,459,764 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PTPN4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	10,325,263 - 10,554,381 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	10,328,766 - 10,554,258 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666061	12,136,097 - 12,365,467 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ptpn4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624732	25,108,192 - 25,278,948 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624732	25,099,327 - 25,301,610 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005397664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01048171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01108232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000003985 ⟹ ENSCLAP00000003909

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955459	9,803,421 - 9,981,392 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000003986 ⟹ ENSCLAP00000003910

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955459	9,883,934 - 9,943,696 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000003987 ⟹ ENSCLAP00000003911

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955459	9,890,217 - 9,943,696 (-)	Ensembl

RefSeq Acc Id:

XM_005397664 ⟹ XP_005397721

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI

Sequence:

show sequence

GGGGCCGGGAGAAATTTGGATTTGGCTGAAGGGTCAGAGGTTTGGGGCCAGGTCCCCCGCCCCG
AGCTCCCCTCCCCCACGGCACTTTGGGGGTGTGGATTATCTCATCCCGGCCGGGAGGTGGGAGC
GGGCGCCGGCTGCCCGCCTCCCGCCGCCTCCCGGCGCGCTGGCCCGCGGCAGCCCCGCAGTATG
AGGTGGTGCTGGCGGCTCGGGGCCGTGGCGCGGCCGCTGCGGCGGCTGCTCGGGGGGCGCTGAG
GGAGCCCCCCGGAGTGGCGCGGCGGACACGCTTCTTCCCGGCGTGCCGGGGCCTCCAAGCTTAT
TCTCCAGCCGAGAGGACGCGGCTGTGATACGAAGATTTTGTGTGGACAGTAATGACCTCACGTT
TCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCAGAGACAGACAGCA
TACAGAGGTGGTTTGCAACATTCTTCTTCTGGATAACACTGTCCAAGCTTTCAAAGTTAATAAG
CATGATCAGGGGCAAGTTCTGTTGGATATAGTCTTTAAGCATCTTGATTTGACTGAGCGAGACT
ATTTTGGTTTGCAGTTGGCTGATGATTCCACAGATAACCCAAGGTGGCTGGATCCAAACAAACC
AATAAGGAAGCAGTTGAAGAGAGGATCTCCTCACAGTTTGAACTTTAGAGTCAAATTTTTTGTA
AGTGACCCCAACAAGTTACAAGAAGAATATACAAGGTACCAGTATTTTTTGCAAATAAAACAAG
ACATTCTTACTGGAAGATTGCCCTGTCCTTATAATACTGCTGCCCTTTTAGCTTCATTTGCTGT
TCAGTCTGAACTTGGAGACTATAATCAGTCAGAAAATTTTCCAGGCTACCTCTCAGATTATTCT
TTCATTCCTAATCAACCTCAAGATTTTGAAAAAGAAATCACAAAATTACATCAACAGCATACAG
GCTTATCTCCTGCAGAAGCAGAATTTAATTACCTAAATACAGCACGTACCTTAGAACTCTATGG
AGTTGAATTCCACTATGCAAGGGATCAAAGTAATAATGAAATTACGATTGGAGTGATGTCAGGA
GGAATTCTGATTTATAACAACAGGCTCCGAATGAATACCTTTCCATGGTTGAAGATTGTAAAAA
TTTCTTTTAAGTGCAAACAGTTTTTTATTCAACTTAGAAAAGAATTGCACGAATCTAGAGAAAC
ACTGTTGGGATTTAATATGGTGAATTACAGAGCATGTAAAAACTTGTGGAAAGCATGTGTAGAA
CATCACACATTCTTCCGTTTGGACAGACCACTTCCACCTCAAAAGAATTTCTTTGCACATTATT
TTACACTAGGTTCAAAATATCGGTACTGTGGGAGAACTGAAGTCCAGTCAGTTCAGTATGGCAA
AGAAAAGGCAAATAAAGACAGGATATTTGCAAGATCCCCAAGTAAGCCATTGGCACGGAAATTA
ATGGATTGGGAAGCAGTAAGCAGAAATTCAATATCTGATGACAGGTTAGAAACCCAAAGCCTTC
CATCACGATCTCCACCTGGAACTCCTAATCATCGAAATTCTACATTCACACAAGAGGGAACCCG
ATTACGACCATGTTCCGTTGGTCATTTGGTAGACCATGTGGTTCACACTTCCCCAAGTGAAGTT
TTCGTGAGTCAGAGATCTCCATCATCAACACAAGCTAATAGCATCGTTCTGGAATCTTCACCTT
CACAAGAGACTCCTGAAGATGGGCAGCCTCCAGCTTTACCACCCAAACAATCTAAGAAAAACAG
TTGGAACCAAATTCATTATTCACAGTCTCAACAAGATCTGGAAAACCATACTGATGAAACATTT
GATGTTCCCTCTTCCCCTGAAAAGTCTACTCCTAATGGTGGTGTTCCACAAGATAATCTTGTTC
TAATCAGAATGAAACCTGATGAAAATGGAAGATTTGGATTCAATGTAAAGGGAGGATATGACCA
GAAGATGCCTGTAATTGTGTCCCGAGTAGCACCAGGAACACCTGCTGACCTCTGTGTCCCTCGA
TTGAATGAAGGGGACCAAGTTGTACTGATCAATGGTTGGGACATTGCAGAACATACCCATGATC
AAGTTGTCCTTTTTATCAAAGCTAGCTGTGAGAGACATTCTGGGGAACTTGTGCTTCTAGTTCG
ACCTAATGCTGTATATGATGTAGTGGAAGAAAAGCTAGAAAATGAGCCAGACTTCCAGTACATT
CCTGAGAAAGCCCCACTGGATAGTGTCCATCAAGATGACCATTCCTTGCGGGAATCGATGATCC
AGCTAGCTGAGGGGCTTATTACTGGAACAGTTCTGGCACAGTTTGATCAACTATATCGGAAGAA
ACCTGGAATGACAATGTCTTGTGCCAAATTACCTCAGAATATTTCCAAAAATAGATACAGAGAT
ATTTCGCCTTATGATGCTACACGGGTCATTTTAAAAGGTAATGAAGACTACATCAATGCAAACT
ATATAAACATGGAAATTCCTTCTTCAAGTATTATTAATCAGTACATTGCTTGTCAAGGACCATT
ACCACACACTTGCACAGATTTTTGGCAAATGACTTGGGAACAAGGCTCCTCCATGGTTGTAATG
TTGACCACACAAGTTGAACGTGGCAGAGTTAAATGTCACCAGTATTGGCCAGAACCCACAGGAA
GTTCATCCTATGGATGTTACCAAGTCACCTGCCACTCCGAAGAAGGAAACCCTGCCTATATCTT
CAGGAAGATGACACTATTTAACCAAGAGAAAAATGAAAGTCGTCAACTCACTCAGATCCAGTAC
ATAGCTTGGCCTGACCATGGAGTCCCTGATGATTCAAGTGACTTTTTGGACTTTGTTTGTCATG
TACGAAATAAAAGGGCCGGAAAAGAAGAACCTGTTGTTGTTCACTGCAGTGCTGGCATTGGAAG
AACCGGGGTTCTTATTACTATGGAAACAGCCATGTGTCTCATTGAATGCAATCAGCCAGTTTAT
CCTCTAGACATTGTAAGAACAATGAGAGATCAACGAGCCATGATGATCCAAACACCTAGTCAAT
ACAGATTTGTATGTGAAGCTATTTTGAAAGTTTATGAAGAAGGCTTTGTTAAACCTTTAACACC
ATCATCAAATAAATAAGAAAACAAAAGTTCTGGGATATGTGTTGGAAAACTGCTTTTCATTATA
TTCACTGTGCCATTGCACCGCTCACAGGAAATGGCATCTCATTAAAAAAAAAAAAAATGAAGAA
CTCACAAAAACTTTGAAAACTTCAGCACTGTTGCACTTTATGTTAAGAAATATGTCACTCTTTC
AAAATCTATAA

hide sequence

RefSeq Acc Id:

XM_013521057 ⟹ XP_013376511

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI

Sequence:

show sequence

GGGGCCGGGAGAAATTTGGATTTGGCTGAAGGGTCAGAGGTTTGGGGCCAGGTCCCCCGCCCCG
AGCTCCCCTCCCCCACGGCACTTTGGGGGTGTGGATTATCTCATCCCGGCCGGGAGGTGGGAGC
GGGCGCCGGCTGCCCGCCTCCCGCCGCCTCCCGGCGCGCTGGCCCGCGGCAGCCCCGCAGTATG
AGGTGGTGCTGGCGGCTCGGGGCCGTGGCGCGGCCGCTGCGGCGGCTGCTCGGGGGGCGCTGAG
GGAGCCCCCCGGAGTGGCGCGGCGGACACGCTTCTTCCCGGCGTGCCGGGGCCTCCAAGCTTAT
TCTCCAGCCGAGAGGACGCGGCTGTGATACGAAGATTTTGTGTGGACAGTAATGACCTCACGTT
TCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCAGAGACAGACAGCA
TACAGAGGTGGTTTGCAACATTCTTCTTCTGGATAACACTGTCCAAGCTTTCAAAGTTAATAAG
CATGATCAGGGGCAAGTTCTGTTGGATATAGTCTTTAAGCATCTTGATTTGACTGAGCGAGACT
ATTTTGGTTTGCAGTTGGCTGATGATTCCACAGATAACCCACACCTGGGGCATGAAGTCCTGCA
GGAAGCCACAGAGCTCGTGGAACAGACCCTTTACATCCCCTCTGCCTCGGAGAGGCTTGCTATG
AAGAGGTGGCTGGATCCAAACAAACCAATAAGGAAGCAGTTGAAGAAATTGCTTTTATTATTTC
TAGGAGGATCTCCTCACAGTTTGAACTTTAGAGTCAAATTTTTTGTAAGTGACCCCAACAAGTT
ACAAGAAGAATATACAAGGTACCAGTATTTTTTGCAAATAAAACAAGACATTCTTACTGGAAGA
TTGCCCTGTCCTTATAATACTGCTGCCCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAG
ACTATAATCAGTCAGAAAATTTTCCAGGCTACCTCTCAGATTATTCTTTCATTCCTAATCAACC
TCAAGATTTTGAAAAAGAAATCACAAAATTACATCAACAGCATACAGGCTTATCTCCTGCAGAA
GCAGAATTTAATTACCTAAATACAGCACGTACCTTAGAACTCTATGGAGTTGAATTCCACTATG
CAAGGGATCAAAGTAATAATGAAATTACGATTGGAGTGATGTCAGGAGGAATTCTGATTTATAA
CAACAGGCTCCGAATGAATACCTTTCCATGGTTGAAGATTGTAAAAATTTCTTTTAAGTGCAAA
CAGTTTTTTATTCAACTTAGAAAAGAATTGCACGAATCTAGAGAAACACTGTTGGGATTTAATA
TGGTGAATTACAGAGCATGTAAAAACTTGTGGAAAGCATGTGTAGAACATCACACATTCTTCCG
TTTGGACAGACCACTTCCACCTCAAAAGAATTTCTTTGCACATTATTTTACACTAGGTTCAAAA
TATCGGTACTGTGGGAGAACTGAAGTCCAGTCAGTTCAGTATGGCAAAGAAAAGGCAAATAAAG
ACAGGATATTTGCAAGATCCCCAAGTAAGCCATTGGCACGGAAATTAATGGATTGGGAAGCAGT
AAGCAGAAATTCAATATCTGATGACAGGTTAGAAACCCAAAGCCTTCCATCACGATCTCCACCT
GGAACTCCTAATCATCGAAATTCTACATTCACACAAGAGGGAACCCGATTACGACCATGTTCCG
TTGGTCATTTGGTAGACCATGTGGTTCACACTTCCCCAAGTGAAGTTTTCGTGAGTCAGAGATC
TCCATCATCAACACAAGCTAATAGCATCGTTCTGGAATCTTCACCTTCACAAGAGACTCCTGAA
GATGGGCAGCCTCCAGCTTTACCACCCAAACAATCTAAGAAAAACAGTTGGAACCAAATTCATT
ATTCACAGTCTCAACAAGATCTGGAAAACCATACTGATGAAACATTTGATGTTCCCTCTTCCCC
TGAAAAGTCTACTCCTAATGGTGGTGTTCCACAAGATAATCTTGTTCTAATCAGAATGAAACCT
GATGAAAATGGAAGATTTGGATTCAATGTAAAGGGAGGATATGACCAGAAGATGCCTGTAATTG
TGTCCCGAGTAGCACCAGGAACACCTGCTGACCTCTGTGTCCCTCGATTGAATGAAGGGGACCA
AGTTGTACTGATCAATGGTTGGGACATTGCAGAACATACCCATGATCAAGTTGTCCTTTTTATC
AAAGCTAGCTGTGAGAGACATTCTGGGGAACTTGTGCTTCTAGTTCGACCTAATGCTGTATATG
ATGTAGTGGAAGAAAAGCTAGAAAATGAGCCAGACTTCCAGTACATTCCTGAGAAAGCCCCACT
GGATAGTGTCCATCAAGATGACCATTCCTTGCGGGAATCGATGATCCAGCTAGCTGAGGGGCTT
ATTACTGGAACAGTTCTGGCACAGTTTGATCAACTATATCGGAAGAAACCTGGAATGACAATGT
CTTGTGCCAAATTACCTCAGAATATTTCCAAAAATAGATACAGAGATATTTCGCCTTATGATGC
TACACGGGTCATTTTAAAAGGTAATGAAGACTACATCAATGCAAACTATATAAACATGGAAATT
CCTTCTTCAAGTATTATTAATCAGTACATTGCTTGTCAAGGACCATTACCACACACTTGCACAG
ATTTTTGGCAAATGACTTGGGAACAAGGCTCCTCCATGGTTGTAATGTTGACCACACAAGTTGA
ACGTGGCAGAGTTAAATGTCACCAGTATTGGCCAGAACCCACAGGAAGTTCATCCTATGGATGT
TACCAAGTCACCTGCCACTCCGAAGAAGGAAACCCTGCCTATATCTTCAGGAAGATGACACTAT
TTAACCAAGAGAAAAATGAAAGTCGTCAACTCACTCAGATCCAGTACATAGCTTGGCCTGACCA
TGGAGTCCCTGATGATTCAAGTGACTTTTTGGACTTTGTTTGTCATGTACGAAATAAAAGGGCC
GGAAAAGAAGAACCTGTTGTTGTTCACTGCAGTGCTGGCATTGGAAGAACCGGGGTTCTTATTA
CTATGGAAACAGCCATGTGTCTCATTGAATGCAATCAGCCAGTTTATCCTCTAGACATTGTAAG
AACAATGAGAGATCAACGAGCCATGATGATCCAAACACCTAGTCAATACAGATTTGTATGTGAA
GCTATTTTGAAAGTTTATGAAGAAGGCTTTGTTAAACCTTTAACACCATCATCAAATAAATAAG
AAAACAAAAGTTCTGGGATATGTGTTGGAAAACTGCTTTTCATTATATTCACTGTGCCATTGCA
CCGCTCACAGGAAATGGCATCTCATTAAAAAAAAAAAAAATGAAGAACTCACAAAAACTTTGAA
AACTTCAGCACTGTTGCACTTTATGTTAAGAAATATGTCACTCTTTCAAAATCTATAA

hide sequence

RefSeq Acc Id:

XM_013521058 ⟹ XP_013376512

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI

Sequence:

show sequence

GGGGCCGGGAGAAATTTGGATTTGGCTGAAGGGTCAGAGGTTTGGGGCCAGGTCCCCCGCCCCG
AGCTCCCCTCCCCCACGGCACTTTGGGGGTGTGGATTATCTCATCCCGGCCGGGAGGTGGGAGC
GGGCGCCGGCTGCCCGCCTCCCGCCGCCTCCCGGCGCGCTGGCCCGCGGCAGCCCCGCAGTATG
AGGTGGTGCTGGCGGCTCGGGGCCGTGGCGCGGCCGCTGCGGCGGCTGCTCGGGGGGCGCTGAG
GGAGCCCCCCGGAGTGGCGCGGCGGACACGCTTCTTCCCGGCGTGCCGGGGCCTCCAAGCTTAT
TCTCCAGCCGAGAGGACGCGGCTGTGATACGAAGATTTTGTGTGGACAGTAATGACCTCACGTT
TCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCAGAGACAGACAGCA
TACAGAGGTGGTTTGCAACATTCTTCTTCTGGATAACACTGTCCAAGCTTTCAAAGTTAATAAG
CATGATCAGGGGCAAGTTCTGTTGGATATAGTCTTTAAGCATCTTGATTTGACTGAGCGAGACT
ATTTTGGTTTGCAGTTGGCTGATGATTCCACAGATAACCCACACCTGGGGCATGAAGTCCTGCA
GGAAGCCACAGAGCTCGTGGAACAGACCCTTTACATCCCCTCTGCCTCGGAGAGGCTTGCTATG
AAGAGGTGGCTGGATCCAAACAAACCAATAAGGAAGCAGTTGAAGAGAGGATCTCCTCACAGTT
TGAACTTTAGAGTCAAATTTTTTGTAAGTGACCCCAACAAGTTACAAGAAGAATATACAAGGTA
CCAGTATTTTTTGCAAATAAAACAAGACATTCTTACTGGAAGATTGCCCTGTCCTTATAATACT
GCTGCCCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAGACTATAATCAGTCAGAAAATT
TTCCAGGCTACCTCTCAGATTATTCTTTCATTCCTAATCAACCTCAAGATTTTGAAAAAGAAAT
CACAAAATTACATCAACAGCATACAGGCTTATCTCCTGCAGAAGCAGAATTTAATTACCTAAAT
ACAGCACGTACCTTAGAACTCTATGGAGTTGAATTCCACTATGCAAGGGATCAAAGTAATAATG
AAATTACGATTGGAGTGATGTCAGGAGGAATTCTGATTTATAACAACAGGCTCCGAATGAATAC
CTTTCCATGGTTGAAGATTGTAAAAATTTCTTTTAAGTGCAAACAGTTTTTTATTCAACTTAGA
AAAGAATTGCACGAATCTAGAGAAACACTGTTGGGATTTAATATGGTGAATTACAGAGCATGTA
AAAACTTGTGGAAAGCATGTGTAGAACATCACACATTCTTCCGTTTGGACAGACCACTTCCACC
TCAAAAGAATTTCTTTGCACATTATTTTACACTAGGTTCAAAATATCGGTACTGTGGGAGAACT
GAAGTCCAGTCAGTTCAGTATGGCAAAGAAAAGGCAAATAAAGACAGGATATTTGCAAGATCCC
CAAGTAAGCCATTGGCACGGAAATTAATGGATTGGGAAGCAGTAAGCAGAAATTCAATATCTGA
TGACAGGTTAGAAACCCAAAGCCTTCCATCACGATCTCCACCTGGAACTCCTAATCATCGAAAT
TCTACATTCACACAAGAGGGAACCCGATTACGACCATGTTCCGTTGGTCATTTGGTAGACCATG
TGGTTCACACTTCCCCAAGTGAAGTTTTCGTGAGTCAGAGATCTCCATCATCAACACAAGCTAA
TAGCATCGTTCTGGAATCTTCACCTTCACAAGAGACTCCTGAAGATGGGCAGCCTCCAGCTTTA
CCACCCAAACAATCTAAGAAAAACAGTTGGAACCAAATTCATTATTCACAGTCTCAACAAGATC
TGGAAAACCATACTGATGAAACATTTGATGTTCCCTCTTCCCCTGAAAAGTCTACTCCTAATGG
TGGTGTTCCACAAGATAATCTTGTTCTAATCAGAATGAAACCTGATGAAAATGGAAGATTTGGA
TTCAATGTAAAGGGAGGATATGACCAGAAGATGCCTGTAATTGTGTCCCGAGTAGCACCAGGAA
CACCTGCTGACCTCTGTGTCCCTCGATTGAATGAAGGGGACCAAGTTGTACTGATCAATGGTTG
GGACATTGCAGAACATACCCATGATCAAGTTGTCCTTTTTATCAAAGCTAGCTGTGAGAGACAT
TCTGGGGAACTTGTGCTTCTAGTTCGACCTAATGCTGTATATGATGTAGTGGAAGAAAAGCTAG
AAAATGAGCCAGACTTCCAGTACATTCCTGAGAAAGCCCCACTGGATAGTGTCCATCAAGATGA
CCATTCCTTGCGGGAATCGATGATCCAGCTAGCTGAGGGGCTTATTACTGGAACAGTTCTGGCA
CAGTTTGATCAACTATATCGGAAGAAACCTGGAATGACAATGTCTTGTGCCAAATTACCTCAGA
ATATTTCCAAAAATAGATACAGAGATATTTCGCCTTATGATGCTACACGGGTCATTTTAAAAGG
TAATGAAGACTACATCAATGCAAACTATATAAACATGGAAATTCCTTCTTCAAGTATTATTAAT
CAGTACATTGCTTGTCAAGGACCATTACCACACACTTGCACAGATTTTTGGCAAATGACTTGGG
AACAAGGCTCCTCCATGGTTGTAATGTTGACCACACAAGTTGAACGTGGCAGAGTTAAATGTCA
CCAGTATTGGCCAGAACCCACAGGAAGTTCATCCTATGGATGTTACCAAGTCACCTGCCACTCC
GAAGAAGGAAACCCTGCCTATATCTTCAGGAAGATGACACTATTTAACCAAGAGAAAAATGAAA
GTCGTCAACTCACTCAGATCCAGTACATAGCTTGGCCTGACCATGGAGTCCCTGATGATTCAAG
TGACTTTTTGGACTTTGTTTGTCATGTACGAAATAAAAGGGCCGGAAAAGAAGAACCTGTTGTT
GTTCACTGCAGTGCTGGCATTGGAAGAACCGGGGTTCTTATTACTATGGAAACAGCCATGTGTC
TCATTGAATGCAATCAGCCAGTTTATCCTCTAGACATTGTAAGAACAATGAGAGATCAACGAGC
CATGATGATCCAAACACCTAGTCAATACAGATTTGTATGTGAAGCTATTTTGAAAGTTTATGAA
GAAGGCTTTGTTAAACCTTTAACACCATCATCAAATAAATAAGAAAACAAAAGTTCTGGGATAT
GTGTTGGAAAACTGCTTTTCATTATATTCACTGTGCCATTGCACCGCTCACAGGAAATGGCATC
TCATTAAAAAAAAAAAAAATGAAGAACTCACAAAAACTTTGAAAACTTCAGCACTGTTGCACTT
TATGTTAAGAAATATGTCACTCTTTCAAAATCTATAA

hide sequence

RefSeq Acc Id:

XM_013521059 ⟹ XP_013376513

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI

Sequence:

show sequence

GGGGCCGGGAGAAATTTGGATTTGGCTGAAGGGTCAGAGGTTTGGGGCCAGGTCCCCCGCCCCG
AGCTCCCCTCCCCCACGGCACTTTGGGGGTGTGGATTATCTCATCCCGGCCGGGAGGTGGGAGC
GGGCGCCGGCTGCCCGCCTCCCGCCGCCTCCCGGCGCGCTGGCCCGCGGCAGCCCCGCAGTATG
AGGTGGTGCTGGCGGCTCGGGGCCGTGGCGCGGCCGCTGCGGCGGCTGCTCGGGGGGCGCTGAG
GGAGCCCCCCGGAGTGGCGCGGCGGACACGCTTCTTCCCGGCGTGCCGGGGCCTCCAAGCTTAT
TCTCCAGCCGAGAGGACGCGGCTGTGATACGAAGATTTTGTGTGGACAGTAATGACCTCACGTT
TCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCAGAGACAGACAGCA
TACAGAGGTGGTTTGCAACATTCTTCTTCTGGATAACACTGTCCAAGCTTTCAAAGTTAATAAG
CATGATCAGGGGCAAGTTCTGTTGGATATAGTCTTTAAGCATCTTGATTTGACTGAGCGAGACT
ATTTTGGTTTGCAGTTGGCTGATGATTCCACAGATAACCCAAGGTGGCTGGATCCAAACAAACC
AATAAGGAAGCAGTTGAAGAAATTGCTTTTATTATTTCTAGGAGGATCTCCTCACAGTTTGAAC
TTTAGAGTCAAATTTTTTGTAAGTGACCCCAACAAGTTACAAGAAGAATATACAAGGTACCAGT
ATTTTTTGCAAATAAAACAAGACATTCTTACTGGAAGATTGCCCTGTCCTTATAATACTGCTGC
CCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAGACTATAATCAGTCAGAAAATTTTCCA
GGCTACCTCTCAGATTATTCTTTCATTCCTAATCAACCTCAAGATTTTGAAAAAGAAATCACAA
AATTACATCAACAGCATACAGGCTTATCTCCTGCAGAAGCAGAATTTAATTACCTAAATACAGC
ACGTACCTTAGAACTCTATGGAGTTGAATTCCACTATGCAAGGGATCAAAGTAATAATGAAATT
ACGATTGGAGTGATGTCAGGAGGAATTCTGATTTATAACAACAGGCTCCGAATGAATACCTTTC
CATGGTTGAAGATTGTAAAAATTTCTTTTAAGTGCAAACAGTTTTTTATTCAACTTAGAAAAGA
ATTGCACGAATCTAGAGAAACACTGTTGGGATTTAATATGGTGAATTACAGAGCATGTAAAAAC
TTGTGGAAAGCATGTGTAGAACATCACACATTCTTCCGTTTGGACAGACCACTTCCACCTCAAA
AGAATTTCTTTGCACATTATTTTACACTAGGTTCAAAATATCGGTACTGTGGGAGAACTGAAGT
CCAGTCAGTTCAGTATGGCAAAGAAAAGGCAAATAAAGACAGGATATTTGCAAGATCCCCAAGT
AAGCCATTGGCACGGAAATTAATGGATTGGGAAGCAGTAAGCAGAAATTCAATATCTGATGACA
GGTTAGAAACCCAAAGCCTTCCATCACGATCTCCACCTGGAACTCCTAATCATCGAAATTCTAC
ATTCACACAAGAGGGAACCCGATTACGACCATGTTCCGTTGGTCATTTGGTAGACCATGTGGTT
CACACTTCCCCAAGTGAAGTTTTCGTGAGTCAGAGATCTCCATCATCAACACAAGCTAATAGCA
TCGTTCTGGAATCTTCACCTTCACAAGAGACTCCTGAAGATGGGCAGCCTCCAGCTTTACCACC
CAAACAATCTAAGAAAAACAGTTGGAACCAAATTCATTATTCACAGTCTCAACAAGATCTGGAA
AACCATACTGATGAAACATTTGATGTTCCCTCTTCCCCTGAAAAGTCTACTCCTAATGGTGGTG
TTCCACAAGATAATCTTGTTCTAATCAGAATGAAACCTGATGAAAATGGAAGATTTGGATTCAA
TGTAAAGGGAGGATATGACCAGAAGATGCCTGTAATTGTGTCCCGAGTAGCACCAGGAACACCT
GCTGACCTCTGTGTCCCTCGATTGAATGAAGGGGACCAAGTTGTACTGATCAATGGTTGGGACA
TTGCAGAACATACCCATGATCAAGTTGTCCTTTTTATCAAAGCTAGCTGTGAGAGACATTCTGG
GGAACTTGTGCTTCTAGTTCGACCTAATGCTGTATATGATGTAGTGGAAGAAAAGCTAGAAAAT
GAGCCAGACTTCCAGTACATTCCTGAGAAAGCCCCACTGGATAGTGTCCATCAAGATGACCATT
CCTTGCGGGAATCGATGATCCAGCTAGCTGAGGGGCTTATTACTGGAACAGTTCTGGCACAGTT
TGATCAACTATATCGGAAGAAACCTGGAATGACAATGTCTTGTGCCAAATTACCTCAGAATATT
TCCAAAAATAGATACAGAGATATTTCGCCTTATGATGCTACACGGGTCATTTTAAAAGGTAATG
AAGACTACATCAATGCAAACTATATAAACATGGAAATTCCTTCTTCAAGTATTATTAATCAGTA
CATTGCTTGTCAAGGACCATTACCACACACTTGCACAGATTTTTGGCAAATGACTTGGGAACAA
GGCTCCTCCATGGTTGTAATGTTGACCACACAAGTTGAACGTGGCAGAGTTAAATGTCACCAGT
ATTGGCCAGAACCCACAGGAAGTTCATCCTATGGATGTTACCAAGTCACCTGCCACTCCGAAGA
AGGAAACCCTGCCTATATCTTCAGGAAGATGACACTATTTAACCAAGAGAAAAATGAAAGTCGT
CAACTCACTCAGATCCAGTACATAGCTTGGCCTGACCATGGAGTCCCTGATGATTCAAGTGACT
TTTTGGACTTTGTTTGTCATGTACGAAATAAAAGGGCCGGAAAAGAAGAACCTGTTGTTGTTCA
CTGCAGTGCTGGCATTGGAAGAACCGGGGTTCTTATTACTATGGAAACAGCCATGTGTCTCATT
GAATGCAATCAGCCAGTTTATCCTCTAGACATTGTAAGAACAATGAGAGATCAACGAGCCATGA
TGATCCAAACACCTAGTCAATACAGATTTGTATGTGAAGCTATTTTGAAAGTTTATGAAGAAGG
CTTTGTTAAACCTTTAACACCATCATCAAATAAATAAGAAAACAAAAGTTCTGGGATATGTGTT
GGAAAACTGCTTTTCATTATATTCACTGTGCCATTGCACCGCTCACAGGAAATGGCATCTCATT
AAAAAAAAAAAAAATGAAGAACTCACAAAAACTTTGAAAACTTCAGCACTGTTGCACTTTATGT
TAAGAAATATGTCACTCTTTCAAAATCTATAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005397721	(Get FASTA)	NCBI Sequence Viewer
	XP_013376511	(Get FASTA)	NCBI Sequence Viewer
	XP_013376512	(Get FASTA)	NCBI Sequence Viewer
	XP_013376513	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000003909
	ENSCLAP00000003909.1
	ENSCLAP00000003910.1
	ENSCLAP00000003911.1

RefSeq Acc Id:	XP_005397721 ⟸ XM_005397664
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C2UR20 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDIVFKHLDL TERDYFGLQLADDSTDNPRWLDPNKPIRKQLKRGSPHSLNFRVKFFVSDPNKLQEEYTRYQYFL QIKQDILTGRLPCPYNTAALLASFAVQSELGDYNQSENFPGYLSDYSFIPNQPQDFEKEITKLH QQHTGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEITIGVMSGGILIYNNRLRMNTFPWL KIVKISFKCKQFFIQLRKELHESRETLLGFNMVNYRACKNLWKACVEHHTFFRLDRPLPPQKNF FAHYFTLGSKYRYCGRTEVQSVQYGKEKANKDRIFARSPSKPLARKLMDWEAVSRNSISDDRLE TQSLPSRSPPGTPNHRNSTFTQEGTRLRPCSVGHLVDHVVHTSPSEVFVSQRSPSSTQANSIVL ESSPSQETPEDGQPPALPPKQSKKNSWNQIHYSQSQQDLENHTDETFDVPSSPEKSTPNGGVPQ DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGWDIAE HTHDQVVLFIKASCERHSGELVLLVRPNAVYDVVEEKLENEPDFQYIPEKAPLDSVHQDDHSLR ESMIQLAEGLITGTVLAQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILKGNEDY INANYINMEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWP EPTGSSSYGCYQVTCHSEEGNPAYIFRKMTLFNQEKNESRQLTQIQYIAWPDHGVPDDSSDFLD FVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQ TPSQYRFVCEAILKVYEEGFVKPLTPSSNK hide sequence

RefSeq Acc Id:

XP_013376513 ⟸ XM_013521059

- Peptide Label:

isoform X3

- Sequence:

show sequence

MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDIVFKHLDL
TERDYFGLQLADDSTDNPRWLDPNKPIRKQLKKLLLLFLGGSPHSLNFRVKFFVSDPNKLQEEY
TRYQYFLQIKQDILTGRLPCPYNTAALLASFAVQSELGDYNQSENFPGYLSDYSFIPNQPQDFE
KEITKLHQQHTGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEITIGVMSGGILIYNNRLR
MNTFPWLKIVKISFKCKQFFIQLRKELHESRETLLGFNMVNYRACKNLWKACVEHHTFFRLDRP
LPPQKNFFAHYFTLGSKYRYCGRTEVQSVQYGKEKANKDRIFARSPSKPLARKLMDWEAVSRNS
ISDDRLETQSLPSRSPPGTPNHRNSTFTQEGTRLRPCSVGHLVDHVVHTSPSEVFVSQRSPSST
QANSIVLESSPSQETPEDGQPPALPPKQSKKNSWNQIHYSQSQQDLENHTDETFDVPSSPEKST
PNGGVPQDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLI
NGWDIAEHTHDQVVLFIKASCERHSGELVLLVRPNAVYDVVEEKLENEPDFQYIPEKAPLDSVH
QDDHSLRESMIQLAEGLITGTVLAQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVI
LKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRV
KCHQYWPEPTGSSSYGCYQVTCHSEEGNPAYIFRKMTLFNQEKNESRQLTQIQYIAWPDHGVPD
DSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRD
QRAMMIQTPSQYRFVCEAILKVYEEGFVKPLTPSSNK

hide sequence

RefSeq Acc Id:

XP_013376512 ⟸ XM_013521058

- Peptide Label:

isoform X2

- Sequence:

show sequence

MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDIVFKHLDL
TERDYFGLQLADDSTDNPHLGHEVLQEATELVEQTLYIPSASERLAMKRWLDPNKPIRKQLKRG
SPHSLNFRVKFFVSDPNKLQEEYTRYQYFLQIKQDILTGRLPCPYNTAALLASFAVQSELGDYN
QSENFPGYLSDYSFIPNQPQDFEKEITKLHQQHTGLSPAEAEFNYLNTARTLELYGVEFHYARD
QSNNEITIGVMSGGILIYNNRLRMNTFPWLKIVKISFKCKQFFIQLRKELHESRETLLGFNMVN
YRACKNLWKACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKYRYCGRTEVQSVQYGKEKANKDRI
FARSPSKPLARKLMDWEAVSRNSISDDRLETQSLPSRSPPGTPNHRNSTFTQEGTRLRPCSVGH
LVDHVVHTSPSEVFVSQRSPSSTQANSIVLESSPSQETPEDGQPPALPPKQSKKNSWNQIHYSQ
SQQDLENHTDETFDVPSSPEKSTPNGGVPQDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSR
VAPGTPADLCVPRLNEGDQVVLINGWDIAEHTHDQVVLFIKASCERHSGELVLLVRPNAVYDVV
EEKLENEPDFQYIPEKAPLDSVHQDDHSLRESMIQLAEGLITGTVLAQFDQLYRKKPGMTMSCA
KLPQNISKNRYRDISPYDATRVILKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCTDFW
QMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEEGNPAYIFRKMTLFNQ
EKNESRQLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITME
TAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEEGFVKPLTPSSNK

hide sequence

RefSeq Acc Id:

XP_013376511 ⟸ XM_013521057

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDIVFKHLDL
TERDYFGLQLADDSTDNPHLGHEVLQEATELVEQTLYIPSASERLAMKRWLDPNKPIRKQLKKL
LLLFLGGSPHSLNFRVKFFVSDPNKLQEEYTRYQYFLQIKQDILTGRLPCPYNTAALLASFAVQ
SELGDYNQSENFPGYLSDYSFIPNQPQDFEKEITKLHQQHTGLSPAEAEFNYLNTARTLELYGV
EFHYARDQSNNEITIGVMSGGILIYNNRLRMNTFPWLKIVKISFKCKQFFIQLRKELHESRETL
LGFNMVNYRACKNLWKACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKYRYCGRTEVQSVQYGKE
KANKDRIFARSPSKPLARKLMDWEAVSRNSISDDRLETQSLPSRSPPGTPNHRNSTFTQEGTRL
RPCSVGHLVDHVVHTSPSEVFVSQRSPSSTQANSIVLESSPSQETPEDGQPPALPPKQSKKNSW
NQIHYSQSQQDLENHTDETFDVPSSPEKSTPNGGVPQDNLVLIRMKPDENGRFGFNVKGGYDQK
MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGWDIAEHTHDQVVLFIKASCERHSGELVLLVRP
NAVYDVVEEKLENEPDFQYIPEKAPLDSVHQDDHSLRESMIQLAEGLITGTVLAQFDQLYRKKP
GMTMSCAKLPQNISKNRYRDISPYDATRVILKGNEDYINANYINMEIPSSSIINQYIACQGPLP
HTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEEGNPAYIFR
KMTLFNQEKNESRQLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRT
GVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEEGFVKPLTPS
SNK

hide sequence

RefSeq Acc Id:

ENSCLAP00000003910 ⟸ ENSCLAT00000003986

RefSeq Acc Id:

ENSCLAP00000003911 ⟸ ENSCLAT00000003987

RefSeq Acc Id:

ENSCLAP00000003909 ⟸ ENSCLAT00000003985

Protein Domains

FERM PDZ Tyrosine specific protein phosphatases Tyrosine-protein phosphatase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000002781	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000003985	ENTREZGENE
	ENSCLAT00000003985.1	UniProtKB/TrEMBL
	ENSCLAT00000003986.1	UniProtKB/TrEMBL
	ENSCLAT00000003987.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.80.10	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
	2.30.42.10	UniProtKB/TrEMBL
	3.90.190.10	UniProtKB/TrEMBL
InterPro	Band_41_domain	UniProtKB/TrEMBL
	FERM-adjacent	UniProtKB/TrEMBL
	FERM/acyl-CoA-bd_prot_sf	UniProtKB/TrEMBL
	FERM_2	UniProtKB/TrEMBL
	FERM_central	UniProtKB/TrEMBL
	FERM_CS	UniProtKB/TrEMBL
	FERM_domain	UniProtKB/TrEMBL
	FERM_N	UniProtKB/TrEMBL
	FERM_PH-like_C	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	Prot-tyrosine_phosphatase-like	UniProtKB/TrEMBL
	PTP_cat	UniProtKB/TrEMBL
	PTPN3/4_FERM_C	UniProtKB/TrEMBL
	Tyr_Pase_AS	UniProtKB/TrEMBL
	Tyr_Pase_cat	UniProtKB/TrEMBL
	Tyr_Pase_dom	UniProtKB/TrEMBL
	Tyr_Pase_non-rcpt_typ-3/4	UniProtKB/TrEMBL
	Ubiquitin-like_domsf	UniProtKB/TrEMBL
NCBI Gene	Ptpn4	ENTREZGENE
PANTHER	TYROSINE-PROTEIN PHOSPHATASE	UniProtKB/TrEMBL
	TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 4	UniProtKB/TrEMBL
Pfam	FERM_C	UniProtKB/TrEMBL
	FERM_M	UniProtKB/TrEMBL
	FERM_N	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PF08736	UniProtKB/TrEMBL
	Y_phosphatase	UniProtKB/TrEMBL
PIRSF	Tyr-Ptase_nr3	UniProtKB/TrEMBL
PRINTS	BAND41	UniProtKB/TrEMBL
	PRTYPHPHTASE	UniProtKB/TrEMBL
PROSITE	FERM_1	UniProtKB/TrEMBL
	FERM_2	UniProtKB/TrEMBL
	FERM_3	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_1	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_2	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_PTP	UniProtKB/TrEMBL
SMART	B41	UniProtKB/TrEMBL
	FERM_C	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PTPc	UniProtKB/TrEMBL
	PTPc_motif	UniProtKB/TrEMBL
	SM01195	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF47031	UniProtKB/TrEMBL
	SSF50156	UniProtKB/TrEMBL
	SSF52799	UniProtKB/TrEMBL
	SSF54236	UniProtKB/TrEMBL
UniProt	A0A8C2UR20	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YJT5_CHILA	UniProtKB/TrEMBL
	A0A8C2YJU2_CHILA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-02-19	Ptpn4	protein tyrosine phosphatase non-receptor type 4		protein tyrosine phosphatase, non-receptor type 4	Symbol and/or name change	5135510	APPROVED
2016-08-03	Ptpn4	protein tyrosine phosphatase, non-receptor type 4		protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar