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Gene: Ptpn4 (protein tyrosine phosphatase non-receptor type 4) Chinchilla lanigera

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Symbol:

Ptpn4

Name:

protein tyrosine phosphatase non-receptor type 4

RGD ID:

8834882

Description:

ENCODES a protein that exhibits glutamate receptor binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); INVOLVED IN peptidyl-tyrosine phosphorylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tyrosine-protein phosphatase non-receptor type 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955459	9,803,421 - 9,981,392 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ptpn4	Chinchilla	genetic disease		ISO	RGD:1316480	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar
Ptpn4	Chinchilla	intellectual disability		ISO	RGD:1316480	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar
Ptpn4	Chinchilla	Neurodevelopmental Disorders		ISO	RGD:1316480	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868\|PMID:34527963

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ptpn4	Chinchilla	peptidyl-tyrosine phosphorylation	acts_upstream_of_or_within	ISO	RGD:1316481	9068941	PMID:33158444	MGI	PMID:33158444

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ptpn4	Chinchilla	cytoplasm	located_in	ISO	RGD:1316480	9068941	PMID:10940933	UniProt	PMID:10940933
Ptpn4	Chinchilla	cytoplasmic side of plasma membrane	located_in	ISO	RGD:1316480	9068941	PMID:10940933	UniProt	PMID:10940933
Ptpn4	Chinchilla	membrane	located_in	ISO	RGD:1316481	9068941	PMID:33158444	MGI	PMID:33158444

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ptpn4	Chinchilla	glutamate receptor binding	enables	ISO	PR:P35436\|PR:Q01097	9068941	PMID:33158444	MGI	PMID:33158444
Ptpn4	Chinchilla	non-membrane spanning protein tyrosine phosphatase activity	enables	ISO	RGD:1316481	9068941	PMID:11054567	MGI	PMID:11054567
Ptpn4	Chinchilla	protein binding	enables	ISO	UniProtKB:Q92993	9068941	PMID:16169070	IntAct	PMID:16169070
Ptpn4	Chinchilla	protein binding	enables	ISO	UniProtKB:P46108	9068941	PMID:21988832	IntAct	PMID:21988832
Ptpn4	Chinchilla	protein binding	enables	ISO	UniProtKB:P24161	9068941	PMID:18614237	IntAct	PMID:18614237
Ptpn4	Chinchilla	protein binding	enables	ISO	UniProtKB:P53778	9068941	PMID:25158884	IntAct	PMID:25158884
Ptpn4	Chinchilla	protein binding	enables	ISO	UniProtKB:P16333	9068941	PMID:17474147	IntAct	PMID:17474147
Ptpn4	Chinchilla	protein binding	enables	ISO	UniProtKB:O75400-2\|UniProtKB:P06307\|UniProtKB:P13473-2\|UniProtKB:P55212	9068941	PMID:32814053	IntAct	PMID:32814053

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

PMID:22301074	PMID:30032202

Ptpn4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955459	9,803,421 - 9,981,392 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI	ChiLan1.0	ChiLan1.0

PTPN4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	119,759,922 - 119,984,899 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	119,759,922 - 119,984,899 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	120,517,498 - 120,742,475 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	120,233,677 - 120,451,507 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	120,233,436 - 120,451,267	NCBI
Celera	2	113,842,942 - 114,061,903 (+)	NCBI		Celera
Cytogenetic Map	2	q14.2	NCBI
HuRef	2	112,841,586 - 113,066,878 (+)	NCBI		HuRef
CHM1_1	2	120,520,785 - 120,746,914 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	120,193,967 - 120,419,641 (+)	NCBI		T2T-CHM13v2.0

Ptpn4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	119,580,197 - 119,765,281 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	119,580,197 - 119,765,343 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	119,652,467 - 119,837,585 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	119,652,467 - 119,837,613 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	121,554,669 - 121,733,648 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	121,487,291 - 121,630,021 (-)	NCBI		MGSCv36	mm8
Celera	1	122,316,986 - 122,496,376 (-)	NCBI		Celera
Cytogenetic Map	1	E2.3	NCBI
cM Map	1	52.39	NCBI

Ptpn4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	33,324,808 - 33,504,957 (-)	NCBI		GRCr8
mRatBN7.2	13	30,772,012 - 30,952,340 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	30,776,682 - 30,952,170 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	33,353,328 - 33,533,288 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	34,641,168 - 34,821,122 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	31,915,258 - 32,095,209 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	35,678,240 - 35,858,414 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	35,678,240 - 35,858,390 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	40,792,728 - 40,972,784 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	32,430,875 - 32,611,163 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	32,475,262 - 32,484,043 (-)	NCBI
Celera	13	30,666,333 - 30,846,454 (-)	NCBI		Celera
Cytogenetic Map	13	q11	NCBI

PTPN4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	21,735,494 - 21,982,547 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	21,750,466 - 21,998,093 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	6,694,192 - 6,917,265 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	120,320,591 - 120,492,423 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	120,320,610 - 120,485,676 (+)	Ensembl	panpan1.1		panPan2

PTPN4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	19	30,079,221 - 30,285,126 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	19	30,086,832 - 30,241,064 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	19	30,335,314 - 30,541,476 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	19	31,454,630 - 31,662,707 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	19	31,461,882 - 31,663,169 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	19	30,140,713 - 30,349,797 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	19	30,310,819 - 30,517,448 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	19	31,493,639 - 31,702,636 (-)	NCBI		UU_Cfam_GSD_1.0

Ptpn4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	90,976,332 - 91,149,472 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	50,470,256 - 50,594,357 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936469	50,463,473 - 50,641,419 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PTPN4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	31,307,447 - 31,502,923 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	31,305,394 - 31,502,978 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	36,235,035 - 36,459,764 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PTPN4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	10,325,263 - 10,554,381 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	10,328,766 - 10,554,258 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666061	12,136,097 - 12,365,467 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ptpn4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624732	25,108,192 - 25,278,948 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624732	25,099,327 - 25,301,610 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005397664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01048171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01048177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01108232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000003985 ⟹ ENSCLAP00000003909

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955459	9,803,421 - 9,981,392 (-)	Ensembl

Ensembl Acc Id:

ENSCLAT00000003986 ⟹ ENSCLAP00000003910

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955459	9,883,934 - 9,943,696 (-)	Ensembl

Ensembl Acc Id:

ENSCLAT00000003987 ⟹ ENSCLAP00000003911

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955459	9,890,217 - 9,943,696 (-)	Ensembl

RefSeq Acc Id:

XM_005397664 ⟹ XP_005397721

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI

Sequence:

show sequence

GGGGCCGGGAGAAATTTGGATTTGGCTGAAGGGTCAGAGGTTTGGGGCCAGGTCCCCCGCCCCGAGCTCCCCTCCCCCACGGCACTTTGGGGGTGTGGATTATCTCATCCCGGCCGGGAGGTGGGAGC
GGGCGCCGGCTGCCCGCCTCCCGCCGCCTCCCGGCGCGCTGGCCCGCGGCAGCCCCGCAGTATGAGGTGGTGCTGGCGGCTCGGGGCCGTGGCGCGGCCGCTGCGGCGGCTGCTCGGGGGGCGCTGAG
GGAGCCCCCCGGAGTGGCGCGGCGGACACGCTTCTTCCCGGCGTGCCGGGGCCTCCAAGCTTATTCTCCAGCCGAGAGGACGCGGCTGTGATACGAAGATTTTGTGTGGACAGTAATGACCTCACGTT
TCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCAGAGACAGACAGCATACAGAGGTGGTTTGCAACATTCTTCTTCTGGATAACACTGTCCAAGCTTTCAAAGTTAATAAG
CATGATCAGGGGCAAGTTCTGTTGGATATAGTCTTTAAGCATCTTGATTTGACTGAGCGAGACTATTTTGGTTTGCAGTTGGCTGATGATTCCACAGATAACCCAAGGTGGCTGGATCCAAACAAACC
AATAAGGAAGCAGTTGAAGAGAGGATCTCCTCACAGTTTGAACTTTAGAGTCAAATTTTTTGTAAGTGACCCCAACAAGTTACAAGAAGAATATACAAGGTACCAGTATTTTTTGCAAATAAAACAAG
ACATTCTTACTGGAAGATTGCCCTGTCCTTATAATACTGCTGCCCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAGACTATAATCAGTCAGAAAATTTTCCAGGCTACCTCTCAGATTATTCT
TTCATTCCTAATCAACCTCAAGATTTTGAAAAAGAAATCACAAAATTACATCAACAGCATACAGGCTTATCTCCTGCAGAAGCAGAATTTAATTACCTAAATACAGCACGTACCTTAGAACTCTATGG
AGTTGAATTCCACTATGCAAGGGATCAAAGTAATAATGAAATTACGATTGGAGTGATGTCAGGAGGAATTCTGATTTATAACAACAGGCTCCGAATGAATACCTTTCCATGGTTGAAGATTGTAAAAA
TTTCTTTTAAGTGCAAACAGTTTTTTATTCAACTTAGAAAAGAATTGCACGAATCTAGAGAAACACTGTTGGGATTTAATATGGTGAATTACAGAGCATGTAAAAACTTGTGGAAAGCATGTGTAGAA
CATCACACATTCTTCCGTTTGGACAGACCACTTCCACCTCAAAAGAATTTCTTTGCACATTATTTTACACTAGGTTCAAAATATCGGTACTGTGGGAGAACTGAAGTCCAGTCAGTTCAGTATGGCAA
AGAAAAGGCAAATAAAGACAGGATATTTGCAAGATCCCCAAGTAAGCCATTGGCACGGAAATTAATGGATTGGGAAGCAGTAAGCAGAAATTCAATATCTGATGACAGGTTAGAAACCCAAAGCCTTC
CATCACGATCTCCACCTGGAACTCCTAATCATCGAAATTCTACATTCACACAAGAGGGAACCCGATTACGACCATGTTCCGTTGGTCATTTGGTAGACCATGTGGTTCACACTTCCCCAAGTGAAGTT
TTCGTGAGTCAGAGATCTCCATCATCAACACAAGCTAATAGCATCGTTCTGGAATCTTCACCTTCACAAGAGACTCCTGAAGATGGGCAGCCTCCAGCTTTACCACCCAAACAATCTAAGAAAAACAG
TTGGAACCAAATTCATTATTCACAGTCTCAACAAGATCTGGAAAACCATACTGATGAAACATTTGATGTTCCCTCTTCCCCTGAAAAGTCTACTCCTAATGGTGGTGTTCCACAAGATAATCTTGTTC
TAATCAGAATGAAACCTGATGAAAATGGAAGATTTGGATTCAATGTAAAGGGAGGATATGACCAGAAGATGCCTGTAATTGTGTCCCGAGTAGCACCAGGAACACCTGCTGACCTCTGTGTCCCTCGA
TTGAATGAAGGGGACCAAGTTGTACTGATCAATGGTTGGGACATTGCAGAACATACCCATGATCAAGTTGTCCTTTTTATCAAAGCTAGCTGTGAGAGACATTCTGGGGAACTTGTGCTTCTAGTTCG
ACCTAATGCTGTATATGATGTAGTGGAAGAAAAGCTAGAAAATGAGCCAGACTTCCAGTACATTCCTGAGAAAGCCCCACTGGATAGTGTCCATCAAGATGACCATTCCTTGCGGGAATCGATGATCC
AGCTAGCTGAGGGGCTTATTACTGGAACAGTTCTGGCACAGTTTGATCAACTATATCGGAAGAAACCTGGAATGACAATGTCTTGTGCCAAATTACCTCAGAATATTTCCAAAAATAGATACAGAGAT
ATTTCGCCTTATGATGCTACACGGGTCATTTTAAAAGGTAATGAAGACTACATCAATGCAAACTATATAAACATGGAAATTCCTTCTTCAAGTATTATTAATCAGTACATTGCTTGTCAAGGACCATT
ACCACACACTTGCACAGATTTTTGGCAAATGACTTGGGAACAAGGCTCCTCCATGGTTGTAATGTTGACCACACAAGTTGAACGTGGCAGAGTTAAATGTCACCAGTATTGGCCAGAACCCACAGGAA
GTTCATCCTATGGATGTTACCAAGTCACCTGCCACTCCGAAGAAGGAAACCCTGCCTATATCTTCAGGAAGATGACACTATTTAACCAAGAGAAAAATGAAAGTCGTCAACTCACTCAGATCCAGTAC
ATAGCTTGGCCTGACCATGGAGTCCCTGATGATTCAAGTGACTTTTTGGACTTTGTTTGTCATGTACGAAATAAAAGGGCCGGAAAAGAAGAACCTGTTGTTGTTCACTGCAGTGCTGGCATTGGAAG
AACCGGGGTTCTTATTACTATGGAAACAGCCATGTGTCTCATTGAATGCAATCAGCCAGTTTATCCTCTAGACATTGTAAGAACAATGAGAGATCAACGAGCCATGATGATCCAAACACCTAGTCAAT
ACAGATTTGTATGTGAAGCTATTTTGAAAGTTTATGAAGAAGGCTTTGTTAAACCTTTAACACCATCATCAAATAAATAAGAAAACAAAAGTTCTGGGATATGTGTTGGAAAACTGCTTTTCATTATA
TTCACTGTGCCATTGCACCGCTCACAGGAAATGGCATCTCATTAAAAAAAAAAAAAATGAAGAACTCACAAAAACTTTGAAAACTTCAGCACTGTTGCACTTTATGTTAAGAAATATGTCACTCTTTC
AAAATCTATAA

hide sequence

RefSeq Acc Id:

XM_013521057 ⟹ XP_013376511

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI

Sequence:

show sequence

GGGGCCGGGAGAAATTTGGATTTGGCTGAAGGGTCAGAGGTTTGGGGCCAGGTCCCCCGCCCCG
AGCTCCCCTCCCCCACGGCACTTTGGGGGTGTGGATTATCTCATCCCGGCCGGGAGGTGGGAGCGGGCGCCGGCTGCCCGCCTCCCGCCGCCTCCCGGCGCGCTGGCCCGCGGCAGCCCCGCAGTATG
AGGTGGTGCTGGCGGCTCGGGGCCGTGGCGCGGCCGCTGCGGCGGCTGCTCGGGGGGCGCTGAGGGAGCCCCCCGGAGTGGCGCGGCGGACACGCTTCTTCCCGGCGTGCCGGGGCCTCCAAGCTTAT
TCTCCAGCCGAGAGGACGCGGCTGTGATACGAAGATTTTGTGTGGACAGTAATGACCTCACGTTTCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCAGAGACAGACAGCA
TACAGAGGTGGTTTGCAACATTCTTCTTCTGGATAACACTGTCCAAGCTTTCAAAGTTAATAAGCATGATCAGGGGCAAGTTCTGTTGGATATAGTCTTTAAGCATCTTGATTTGACTGAGCGAGACT
ATTTTGGTTTGCAGTTGGCTGATGATTCCACAGATAACCCACACCTGGGGCATGAAGTCCTGCAGGAAGCCACAGAGCTCGTGGAACAGACCCTTTACATCCCCTCTGCCTCGGAGAGGCTTGCTATG
AAGAGGTGGCTGGATCCAAACAAACCAATAAGGAAGCAGTTGAAGAAATTGCTTTTATTATTTCTAGGAGGATCTCCTCACAGTTTGAACTTTAGAGTCAAATTTTTTGTAAGTGACCCCAACAAGTT
ACAAGAAGAATATACAAGGTACCAGTATTTTTTGCAAATAAAACAAGACATTCTTACTGGAAGATTGCCCTGTCCTTATAATACTGCTGCCCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAG
ACTATAATCAGTCAGAAAATTTTCCAGGCTACCTCTCAGATTATTCTTTCATTCCTAATCAACCTCAAGATTTTGAAAAAGAAATCACAAAATTACATCAACAGCATACAGGCTTATCTCCTGCAGAA
GCAGAATTTAATTACCTAAATACAGCACGTACCTTAGAACTCTATGGAGTTGAATTCCACTATGCAAGGGATCAAAGTAATAATGAAATTACGATTGGAGTGATGTCAGGAGGAATTCTGATTTATAA
CAACAGGCTCCGAATGAATACCTTTCCATGGTTGAAGATTGTAAAAATTTCTTTTAAGTGCAAACAGTTTTTTATTCAACTTAGAAAAGAATTGCACGAATCTAGAGAAACACTGTTGGGATTTAATA
TGGTGAATTACAGAGCATGTAAAAACTTGTGGAAAGCATGTGTAGAACATCACACATTCTTCCGTTTGGACAGACCACTTCCACCTCAAAAGAATTTCTTTGCACATTATTTTACACTAGGTTCAAAA
TATCGGTACTGTGGGAGAACTGAAGTCCAGTCAGTTCAGTATGGCAAAGAAAAGGCAAATAAAGACAGGATATTTGCAAGATCCCCAAGTAAGCCATTGGCACGGAAATTAATGGATTGGGAAGCAGT
AAGCAGAAATTCAATATCTGATGACAGGTTAGAAACCCAAAGCCTTCCATCACGATCTCCACCTGGAACTCCTAATCATCGAAATTCTACATTCACACAAGAGGGAACCCGATTACGACCATGTTCCG
TTGGTCATTTGGTAGACCATGTGGTTCACACTTCCCCAAGTGAAGTTTTCGTGAGTCAGAGATCTCCATCATCAACACAAGCTAATAGCATCGTTCTGGAATCTTCACCTTCACAAGAGACTCCTGAA
GATGGGCAGCCTCCAGCTTTACCACCCAAACAATCTAAGAAAAACAGTTGGAACCAAATTCATTATTCACAGTCTCAACAAGATCTGGAAAACCATACTGATGAAACATTTGATGTTCCCTCTTCCCC
TGAAAAGTCTACTCCTAATGGTGGTGTTCCACAAGATAATCTTGTTCTAATCAGAATGAAACCTGATGAAAATGGAAGATTTGGATTCAATGTAAAGGGAGGATATGACCAGAAGATGCCTGTAATTG
TGTCCCGAGTAGCACCAGGAACACCTGCTGACCTCTGTGTCCCTCGATTGAATGAAGGGGACCAAGTTGTACTGATCAATGGTTGGGACATTGCAGAACATACCCATGATCAAGTTGTCCTTTTTATC
AAAGCTAGCTGTGAGAGACATTCTGGGGAACTTGTGCTTCTAGTTCGACCTAATGCTGTATATGATGTAGTGGAAGAAAAGCTAGAAAATGAGCCAGACTTCCAGTACATTCCTGAGAAAGCCCCACT
GGATAGTGTCCATCAAGATGACCATTCCTTGCGGGAATCGATGATCCAGCTAGCTGAGGGGCTTATTACTGGAACAGTTCTGGCACAGTTTGATCAACTATATCGGAAGAAACCTGGAATGACAATGT
CTTGTGCCAAATTACCTCAGAATATTTCCAAAAATAGATACAGAGATATTTCGCCTTATGATGCTACACGGGTCATTTTAAAAGGTAATGAAGACTACATCAATGCAAACTATATAAACATGGAAATT
CCTTCTTCAAGTATTATTAATCAGTACATTGCTTGTCAAGGACCATTACCACACACTTGCACAGATTTTTGGCAAATGACTTGGGAACAAGGCTCCTCCATGGTTGTAATGTTGACCACACAAGTTGA
ACGTGGCAGAGTTAAATGTCACCAGTATTGGCCAGAACCCACAGGAAGTTCATCCTATGGATGTTACCAAGTCACCTGCCACTCCGAAGAAGGAAACCCTGCCTATATCTTCAGGAAGATGACACTAT
TTAACCAAGAGAAAAATGAAAGTCGTCAACTCACTCAGATCCAGTACATAGCTTGGCCTGACCATGGAGTCCCTGATGATTCAAGTGACTTTTTGGACTTTGTTTGTCATGTACGAAATAAAAGGGCC
GGAAAAGAAGAACCTGTTGTTGTTCACTGCAGTGCTGGCATTGGAAGAACCGGGGTTCTTATTACTATGGAAACAGCCATGTGTCTCATTGAATGCAATCAGCCAGTTTATCCTCTAGACATTGTAAG
AACAATGAGAGATCAACGAGCCATGATGATCCAAACACCTAGTCAATACAGATTTGTATGTGAAGCTATTTTGAAAGTTTATGAAGAAGGCTTTGTTAAACCTTTAACACCATCATCAAATAAATAAG
AAAACAAAAGTTCTGGGATATGTGTTGGAAAACTGCTTTTCATTATATTCACTGTGCCATTGCACCGCTCACAGGAAATGGCATCTCATTAAAAAAAAAAAAAATGAAGAACTCACAAAAACTTTGAA
AACTTCAGCACTGTTGCACTTTATGTTAAGAAATATGTCACTCTTTCAAAATCTATAA

hide sequence

RefSeq Acc Id:

XM_013521058 ⟹ XP_013376512

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI

Sequence:

show sequence

GGGGCCGGGAGAAATTTGGATTTGGCTGAAGGGTCAGAGGTTTGGGGCCAGGTCCCCCGCCCCG
AGCTCCCCTCCCCCACGGCACTTTGGGGGTGTGGATTATCTCATCCCGGCCGGGAGGTGGGAGCGGGCGCCGGCTGCCCGCCTCCCGCCGCCTCCCGGCGCGCTGGCCCGCGGCAGCCCCGCAGTATG
AGGTGGTGCTGGCGGCTCGGGGCCGTGGCGCGGCCGCTGCGGCGGCTGCTCGGGGGGCGCTGAGGGAGCCCCCCGGAGTGGCGCGGCGGACACGCTTCTTCCCGGCGTGCCGGGGCCTCCAAGCTTAT
TCTCCAGCCGAGAGGACGCGGCTGTGATACGAAGATTTTGTGTGGACAGTAATGACCTCACGTTTCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCAGAGACAGACAGCA
TACAGAGGTGGTTTGCAACATTCTTCTTCTGGATAACACTGTCCAAGCTTTCAAAGTTAATAAGCATGATCAGGGGCAAGTTCTGTTGGATATAGTCTTTAAGCATCTTGATTTGACTGAGCGAGACT
ATTTTGGTTTGCAGTTGGCTGATGATTCCACAGATAACCCACACCTGGGGCATGAAGTCCTGCAGGAAGCCACAGAGCTCGTGGAACAGACCCTTTACATCCCCTCTGCCTCGGAGAGGCTTGCTATG
AAGAGGTGGCTGGATCCAAACAAACCAATAAGGAAGCAGTTGAAGAGAGGATCTCCTCACAGTTTGAACTTTAGAGTCAAATTTTTTGTAAGTGACCCCAACAAGTTACAAGAAGAATATACAAGGTA
CCAGTATTTTTTGCAAATAAAACAAGACATTCTTACTGGAAGATTGCCCTGTCCTTATAATACTGCTGCCCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAGACTATAATCAGTCAGAAAATT
TTCCAGGCTACCTCTCAGATTATTCTTTCATTCCTAATCAACCTCAAGATTTTGAAAAAGAAATCACAAAATTACATCAACAGCATACAGGCTTATCTCCTGCAGAAGCAGAATTTAATTACCTAAAT
ACAGCACGTACCTTAGAACTCTATGGAGTTGAATTCCACTATGCAAGGGATCAAAGTAATAATGAAATTACGATTGGAGTGATGTCAGGAGGAATTCTGATTTATAACAACAGGCTCCGAATGAATAC
CTTTCCATGGTTGAAGATTGTAAAAATTTCTTTTAAGTGCAAACAGTTTTTTATTCAACTTAGAAAAGAATTGCACGAATCTAGAGAAACACTGTTGGGATTTAATATGGTGAATTACAGAGCATGTA
AAAACTTGTGGAAAGCATGTGTAGAACATCACACATTCTTCCGTTTGGACAGACCACTTCCACCTCAAAAGAATTTCTTTGCACATTATTTTACACTAGGTTCAAAATATCGGTACTGTGGGAGAACT
GAAGTCCAGTCAGTTCAGTATGGCAAAGAAAAGGCAAATAAAGACAGGATATTTGCAAGATCCCCAAGTAAGCCATTGGCACGGAAATTAATGGATTGGGAAGCAGTAAGCAGAAATTCAATATCTGA
TGACAGGTTAGAAACCCAAAGCCTTCCATCACGATCTCCACCTGGAACTCCTAATCATCGAAATTCTACATTCACACAAGAGGGAACCCGATTACGACCATGTTCCGTTGGTCATTTGGTAGACCATG
TGGTTCACACTTCCCCAAGTGAAGTTTTCGTGAGTCAGAGATCTCCATCATCAACACAAGCTAATAGCATCGTTCTGGAATCTTCACCTTCACAAGAGACTCCTGAAGATGGGCAGCCTCCAGCTTTA
CCACCCAAACAATCTAAGAAAAACAGTTGGAACCAAATTCATTATTCACAGTCTCAACAAGATCTGGAAAACCATACTGATGAAACATTTGATGTTCCCTCTTCCCCTGAAAAGTCTACTCCTAATGG
TGGTGTTCCACAAGATAATCTTGTTCTAATCAGAATGAAACCTGATGAAAATGGAAGATTTGGATTCAATGTAAAGGGAGGATATGACCAGAAGATGCCTGTAATTGTGTCCCGAGTAGCACCAGGAA
CACCTGCTGACCTCTGTGTCCCTCGATTGAATGAAGGGGACCAAGTTGTACTGATCAATGGTTGGGACATTGCAGAACATACCCATGATCAAGTTGTCCTTTTTATCAAAGCTAGCTGTGAGAGACAT
TCTGGGGAACTTGTGCTTCTAGTTCGACCTAATGCTGTATATGATGTAGTGGAAGAAAAGCTAGAAAATGAGCCAGACTTCCAGTACATTCCTGAGAAAGCCCCACTGGATAGTGTCCATCAAGATGA
CCATTCCTTGCGGGAATCGATGATCCAGCTAGCTGAGGGGCTTATTACTGGAACAGTTCTGGCACAGTTTGATCAACTATATCGGAAGAAACCTGGAATGACAATGTCTTGTGCCAAATTACCTCAGA
ATATTTCCAAAAATAGATACAGAGATATTTCGCCTTATGATGCTACACGGGTCATTTTAAAAGGTAATGAAGACTACATCAATGCAAACTATATAAACATGGAAATTCCTTCTTCAAGTATTATTAAT
CAGTACATTGCTTGTCAAGGACCATTACCACACACTTGCACAGATTTTTGGCAAATGACTTGGGAACAAGGCTCCTCCATGGTTGTAATGTTGACCACACAAGTTGAACGTGGCAGAGTTAAATGTCA
CCAGTATTGGCCAGAACCCACAGGAAGTTCATCCTATGGATGTTACCAAGTCACCTGCCACTCCGAAGAAGGAAACCCTGCCTATATCTTCAGGAAGATGACACTATTTAACCAAGAGAAAAATGAAA
GTCGTCAACTCACTCAGATCCAGTACATAGCTTGGCCTGACCATGGAGTCCCTGATGATTCAAGTGACTTTTTGGACTTTGTTTGTCATGTACGAAATAAAAGGGCCGGAAAAGAAGAACCTGTTGTT
GTTCACTGCAGTGCTGGCATTGGAAGAACCGGGGTTCTTATTACTATGGAAACAGCCATGTGTCTCATTGAATGCAATCAGCCAGTTTATCCTCTAGACATTGTAAGAACAATGAGAGATCAACGAGC
CATGATGATCCAAACACCTAGTCAATACAGATTTGTATGTGAAGCTATTTTGAAAGTTTATGAAGAAGGCTTTGTTAAACCTTTAACACCATCATCAAATAAATAAGAAAACAAAAGTTCTGGGATAT
GTGTTGGAAAACTGCTTTTCATTATATTCACTGTGCCATTGCACCGCTCACAGGAAATGGCATCTCATTAAAAAAAAAAAAAATGAAGAACTCACAAAAACTTTGAAAACTTCAGCACTGTTGCACTT
TATGTTAAGAAATATGTCACTCTTTCAAAATCTATAA

hide sequence

RefSeq Acc Id:

XM_013521059 ⟹ XP_013376513

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955459	9,803,421 - 9,981,392 (-)	NCBI

Sequence:

show sequence

GGGGCCGGGAGAAATTTGGATTTGGCTGAAGGGTCAGAGGTTTGGGGCCAGGTCCCCCGCCCCG
AGCTCCCCTCCCCCACGGCACTTTGGGGGTGTGGATTATCTCATCCCGGCCGGGAGGTGGGAGCGGGCGCCGGCTGCCCGCCTCCCGCCGCCTCCCGGCGCGCTGGCCCGCGGCAGCCCCGCAGTATG
AGGTGGTGCTGGCGGCTCGGGGCCGTGGCGCGGCCGCTGCGGCGGCTGCTCGGGGGGCGCTGAGGGAGCCCCCCGGAGTGGCGCGGCGGACACGCTTCTTCCCGGCGTGCCGGGGCCTCCAAGCTTAT
TCTCCAGCCGAGAGGACGCGGCTGTGATACGAAGATTTTGTGTGGACAGTAATGACCTCACGTTTCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCAGAGACAGACAGCA
TACAGAGGTGGTTTGCAACATTCTTCTTCTGGATAACACTGTCCAAGCTTTCAAAGTTAATAAGCATGATCAGGGGCAAGTTCTGTTGGATATAGTCTTTAAGCATCTTGATTTGACTGAGCGAGACT
ATTTTGGTTTGCAGTTGGCTGATGATTCCACAGATAACCCAAGGTGGCTGGATCCAAACAAACCAATAAGGAAGCAGTTGAAGAAATTGCTTTTATTATTTCTAGGAGGATCTCCTCACAGTTTGAAC
TTTAGAGTCAAATTTTTTGTAAGTGACCCCAACAAGTTACAAGAAGAATATACAAGGTACCAGTATTTTTTGCAAATAAAACAAGACATTCTTACTGGAAGATTGCCCTGTCCTTATAATACTGCTGC
CCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAGACTATAATCAGTCAGAAAATTTTCCAGGCTACCTCTCAGATTATTCTTTCATTCCTAATCAACCTCAAGATTTTGAAAAAGAAATCACAA
AATTACATCAACAGCATACAGGCTTATCTCCTGCAGAAGCAGAATTTAATTACCTAAATACAGCACGTACCTTAGAACTCTATGGAGTTGAATTCCACTATGCAAGGGATCAAAGTAATAATGAAATT
ACGATTGGAGTGATGTCAGGAGGAATTCTGATTTATAACAACAGGCTCCGAATGAATACCTTTCCATGGTTGAAGATTGTAAAAATTTCTTTTAAGTGCAAACAGTTTTTTATTCAACTTAGAAAAGA
ATTGCACGAATCTAGAGAAACACTGTTGGGATTTAATATGGTGAATTACAGAGCATGTAAAAACTTGTGGAAAGCATGTGTAGAACATCACACATTCTTCCGTTTGGACAGACCACTTCCACCTCAAA
AGAATTTCTTTGCACATTATTTTACACTAGGTTCAAAATATCGGTACTGTGGGAGAACTGAAGTCCAGTCAGTTCAGTATGGCAAAGAAAAGGCAAATAAAGACAGGATATTTGCAAGATCCCCAAGT
AAGCCATTGGCACGGAAATTAATGGATTGGGAAGCAGTAAGCAGAAATTCAATATCTGATGACAGGTTAGAAACCCAAAGCCTTCCATCACGATCTCCACCTGGAACTCCTAATCATCGAAATTCTAC
ATTCACACAAGAGGGAACCCGATTACGACCATGTTCCGTTGGTCATTTGGTAGACCATGTGGTTCACACTTCCCCAAGTGAAGTTTTCGTGAGTCAGAGATCTCCATCATCAACACAAGCTAATAGCA
TCGTTCTGGAATCTTCACCTTCACAAGAGACTCCTGAAGATGGGCAGCCTCCAGCTTTACCACCCAAACAATCTAAGAAAAACAGTTGGAACCAAATTCATTATTCACAGTCTCAACAAGATCTGGAA
AACCATACTGATGAAACATTTGATGTTCCCTCTTCCCCTGAAAAGTCTACTCCTAATGGTGGTGTTCCACAAGATAATCTTGTTCTAATCAGAATGAAACCTGATGAAAATGGAAGATTTGGATTCAA
TGTAAAGGGAGGATATGACCAGAAGATGCCTGTAATTGTGTCCCGAGTAGCACCAGGAACACCTGCTGACCTCTGTGTCCCTCGATTGAATGAAGGGGACCAAGTTGTACTGATCAATGGTTGGGACA
TTGCAGAACATACCCATGATCAAGTTGTCCTTTTTATCAAAGCTAGCTGTGAGAGACATTCTGGGGAACTTGTGCTTCTAGTTCGACCTAATGCTGTATATGATGTAGTGGAAGAAAAGCTAGAAAAT
GAGCCAGACTTCCAGTACATTCCTGAGAAAGCCCCACTGGATAGTGTCCATCAAGATGACCATTCCTTGCGGGAATCGATGATCCAGCTAGCTGAGGGGCTTATTACTGGAACAGTTCTGGCACAGTT
TGATCAACTATATCGGAAGAAACCTGGAATGACAATGTCTTGTGCCAAATTACCTCAGAATATTTCCAAAAATAGATACAGAGATATTTCGCCTTATGATGCTACACGGGTCATTTTAAAAGGTAATG
AAGACTACATCAATGCAAACTATATAAACATGGAAATTCCTTCTTCAAGTATTATTAATCAGTACATTGCTTGTCAAGGACCATTACCACACACTTGCACAGATTTTTGGCAAATGACTTGGGAACAA
GGCTCCTCCATGGTTGTAATGTTGACCACACAAGTTGAACGTGGCAGAGTTAAATGTCACCAGTATTGGCCAGAACCCACAGGAAGTTCATCCTATGGATGTTACCAAGTCACCTGCCACTCCGAAGA
AGGAAACCCTGCCTATATCTTCAGGAAGATGACACTATTTAACCAAGAGAAAAATGAAAGTCGTCAACTCACTCAGATCCAGTACATAGCTTGGCCTGACCATGGAGTCCCTGATGATTCAAGTGACT
TTTTGGACTTTGTTTGTCATGTACGAAATAAAAGGGCCGGAAAAGAAGAACCTGTTGTTGTTCACTGCAGTGCTGGCATTGGAAGAACCGGGGTTCTTATTACTATGGAAACAGCCATGTGTCTCATT
GAATGCAATCAGCCAGTTTATCCTCTAGACATTGTAAGAACAATGAGAGATCAACGAGCCATGATGATCCAAACACCTAGTCAATACAGATTTGTATGTGAAGCTATTTTGAAAGTTTATGAAGAAGG
CTTTGTTAAACCTTTAACACCATCATCAAATAAATAAGAAAACAAAAGTTCTGGGATATGTGTTGGAAAACTGCTTTTCATTATATTCACTGTGCCATTGCACCGCTCACAGGAAATGGCATCTCATT
AAAAAAAAAAAAAATGAAGAACTCACAAAAACTTTGAAAACTTCAGCACTGTTGCACTTTATGTTAAGAAATATGTCACTCTTTCAAAATCTATAA

hide sequence


Protein RefSeqs	XP_005397721	(Get FASTA)	NCBI Sequence Viewer
	XP_013376511	(Get FASTA)	NCBI Sequence Viewer
	XP_013376512	(Get FASTA)	NCBI Sequence Viewer
	XP_013376513	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000003909
	ENSCLAP00000003909.1
	ENSCLAP00000003910.1
	ENSCLAP00000003911.1

RefSeq Acc Id:	XP_005397721 ⟸ XM_005397664
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C2UR20 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDIVFKHLDLTERDYFGLQLADDSTDNPRWLDPNKPIRKQLKRGSPHSLNFRVKFFVSDPNKLQEEYTRYQYFL QIKQDILTGRLPCPYNTAALLASFAVQSELGDYNQSENFPGYLSDYSFIPNQPQDFEKEITKLHQQHTGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEITIGVMSGGILIYNNRLRMNTFPWL KIVKISFKCKQFFIQLRKELHESRETLLGFNMVNYRACKNLWKACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKYRYCGRTEVQSVQYGKEKANKDRIFARSPSKPLARKLMDWEAVSRNSISDDRLE TQSLPSRSPPGTPNHRNSTFTQEGTRLRPCSVGHLVDHVVHTSPSEVFVSQRSPSSTQANSIVLESSPSQETPEDGQPPALPPKQSKKNSWNQIHYSQSQQDLENHTDETFDVPSSPEKSTPNGGVPQ DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGWDIAEHTHDQVVLFIKASCERHSGELVLLVRPNAVYDVVEEKLENEPDFQYIPEKAPLDSVHQDDHSLR ESMIQLAEGLITGTVLAQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWP EPTGSSSYGCYQVTCHSEEGNPAYIFRKMTLFNQEKNESRQLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQ TPSQYRFVCEAILKVYEEGFVKPLTPSSNK hide sequence

RefSeq Acc Id:

XP_013376513 ⟸ XM_013521059

- Peptide Label:

isoform X3

- Sequence:

show sequence

MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDIVFKHLDL
TERDYFGLQLADDSTDNPRWLDPNKPIRKQLKKLLLLFLGGSPHSLNFRVKFFVSDPNKLQEEYTRYQYFLQIKQDILTGRLPCPYNTAALLASFAVQSELGDYNQSENFPGYLSDYSFIPNQPQDFE
KEITKLHQQHTGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEITIGVMSGGILIYNNRLRMNTFPWLKIVKISFKCKQFFIQLRKELHESRETLLGFNMVNYRACKNLWKACVEHHTFFRLDRP
LPPQKNFFAHYFTLGSKYRYCGRTEVQSVQYGKEKANKDRIFARSPSKPLARKLMDWEAVSRNSISDDRLETQSLPSRSPPGTPNHRNSTFTQEGTRLRPCSVGHLVDHVVHTSPSEVFVSQRSPSST
QANSIVLESSPSQETPEDGQPPALPPKQSKKNSWNQIHYSQSQQDLENHTDETFDVPSSPEKSTPNGGVPQDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLI
NGWDIAEHTHDQVVLFIKASCERHSGELVLLVRPNAVYDVVEEKLENEPDFQYIPEKAPLDSVHQDDHSLRESMIQLAEGLITGTVLAQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVI
LKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEEGNPAYIFRKMTLFNQEKNESRQLTQIQYIAWPDHGVPD
DSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEEGFVKPLTPSSNK

hide sequence

RefSeq Acc Id:

XP_013376512 ⟸ XM_013521058

- Peptide Label:

isoform X2

- Sequence:

show sequence

MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDIVFKHLDLTERDYFGLQLADDSTDNPHLGHEVLQEATELVEQTLYIPSASERLAMKRWLDPNKPIRKQLKRG
SPHSLNFRVKFFVSDPNKLQEEYTRYQYFLQIKQDILTGRLPCPYNTAALLASFAVQSELGDYNQSENFPGYLSDYSFIPNQPQDFEKEITKLHQQHTGLSPAEAEFNYLNTARTLELYGVEFHYARD
QSNNEITIGVMSGGILIYNNRLRMNTFPWLKIVKISFKCKQFFIQLRKELHESRETLLGFNMVNYRACKNLWKACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKYRYCGRTEVQSVQYGKEKANKDRI
FARSPSKPLARKLMDWEAVSRNSISDDRLETQSLPSRSPPGTPNHRNSTFTQEGTRLRPCSVGHLVDHVVHTSPSEVFVSQRSPSSTQANSIVLESSPSQETPEDGQPPALPPKQSKKNSWNQIHYSQ
SQQDLENHTDETFDVPSSPEKSTPNGGVPQDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGWDIAEHTHDQVVLFIKASCERHSGELVLLVRPNAVYDVV
EEKLENEPDFQYIPEKAPLDSVHQDDHSLRESMIQLAEGLITGTVLAQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCTDFW
QMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEEGNPAYIFRKMTLFNQEKNESRQLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITME
TAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEEGFVKPLTPSSNK

hide sequence

RefSeq Acc Id:

XP_013376511 ⟸ XM_013521057

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDIVFKHLDL
TERDYFGLQLADDSTDNPHLGHEVLQEATELVEQTLYIPSASERLAMKRWLDPNKPIRKQLKKLLLLFLGGSPHSLNFRVKFFVSDPNKLQEEYTRYQYFLQIKQDILTGRLPCPYNTAALLASFAVQ
SELGDYNQSENFPGYLSDYSFIPNQPQDFEKEITKLHQQHTGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEITIGVMSGGILIYNNRLRMNTFPWLKIVKISFKCKQFFIQLRKELHESRETL
LGFNMVNYRACKNLWKACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKYRYCGRTEVQSVQYGKEKANKDRIFARSPSKPLARKLMDWEAVSRNSISDDRLETQSLPSRSPPGTPNHRNSTFTQEGTRL
RPCSVGHLVDHVVHTSPSEVFVSQRSPSSTQANSIVLESSPSQETPEDGQPPALPPKQSKKNSWNQIHYSQSQQDLENHTDETFDVPSSPEKSTPNGGVPQDNLVLIRMKPDENGRFGFNVKGGYDQK
MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGWDIAEHTHDQVVLFIKASCERHSGELVLLVRPNAVYDVVEEKLENEPDFQYIPEKAPLDSVHQDDHSLRESMIQLAEGLITGTVLAQFDQLYRKKP
GMTMSCAKLPQNISKNRYRDISPYDATRVILKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEEGNPAYIFR
KMTLFNQEKNESRQLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEEGFVKPLTPS
SNK

hide sequence

Ensembl Acc Id:

ENSCLAP00000003910 ⟸ ENSCLAT00000003986

Protein Domains

FERM PDZ Tyrosine specific protein phosphatases Tyrosine-protein phosphatase

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000002781	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000003985	ENTREZGENE
	ENSCLAT00000003985.1	UniProtKB/TrEMBL
	ENSCLAT00000003986.1	UniProtKB/TrEMBL
	ENSCLAT00000003987.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.80.10	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
	2.30.42.10	UniProtKB/TrEMBL
	3.90.190.10	UniProtKB/TrEMBL
	Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1	UniProtKB/TrEMBL
InterPro	Band_41_domain	UniProtKB/TrEMBL
	FERM-adjacent	UniProtKB/TrEMBL
	FERM/acyl-CoA-bd_prot_sf	UniProtKB/TrEMBL
	FERM_2	UniProtKB/TrEMBL
	FERM_central	UniProtKB/TrEMBL
	FERM_CS	UniProtKB/TrEMBL
	FERM_domain	UniProtKB/TrEMBL
	FERM_N	UniProtKB/TrEMBL
	FERM_PH-like_C	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	Prot-tyrosine_phosphatase-like	UniProtKB/TrEMBL
	PTP_cat	UniProtKB/TrEMBL
	PTPN3/4_FERM_C	UniProtKB/TrEMBL
	Tyr_Pase_AS	UniProtKB/TrEMBL
	Tyr_Pase_cat	UniProtKB/TrEMBL
	Tyr_Pase_dom	UniProtKB/TrEMBL
	Tyr_Pase_non-rcpt_typ-3/4	UniProtKB/TrEMBL
	Ubiquitin-like_domsf	UniProtKB/TrEMBL
NCBI Gene	Ptpn4	ENTREZGENE
PANTHER	TYROSINE-PROTEIN PHOSPHATASE	UniProtKB/TrEMBL
	TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 4	UniProtKB/TrEMBL
Pfam	FERM_C	UniProtKB/TrEMBL
	FERM_M	UniProtKB/TrEMBL
	FERM_N	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PF08736	UniProtKB/TrEMBL
	Y_phosphatase	UniProtKB/TrEMBL
PIRSF	Tyr-Ptase_nr3	UniProtKB/TrEMBL
PRINTS	BAND41	UniProtKB/TrEMBL
	PRTYPHPHTASE	UniProtKB/TrEMBL
PROSITE	FERM_1	UniProtKB/TrEMBL
	FERM_2	UniProtKB/TrEMBL
	FERM_3	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_1	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_2	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_PTP	UniProtKB/TrEMBL
SMART	B41	UniProtKB/TrEMBL
	FERM_C	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PTPc	UniProtKB/TrEMBL
	PTPc_motif	UniProtKB/TrEMBL
	SM01195	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF47031	UniProtKB/TrEMBL
	SSF50156	UniProtKB/TrEMBL
	SSF52799	UniProtKB/TrEMBL
	SSF54236	UniProtKB/TrEMBL
UniProt	A0A8C2UR20	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YJT5_CHILA	UniProtKB/TrEMBL
	A0A8C2YJU2_CHILA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-02-19	Ptpn4	protein tyrosine phosphatase non-receptor type 4		protein tyrosine phosphatase, non-receptor type 4	Symbol and/or name change	5135510	APPROVED
2016-08-03	Ptpn4	protein tyrosine phosphatase, non-receptor type 4		protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar