Phb1-ps4 (prohibitin 1, pseudogene 4) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Phb1-ps4 (prohibitin 1, pseudogene 4) Rattus norvegicus
Analyze
Symbol: Phb1-ps4
Name: prohibitin 1, pseudogene 4
RGD ID: 7639290
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC102550335; prohibitin-like
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84106,640,506 - 106,642,978 (-)NCBIGRCr8
mRatBN7.24105,082,392 - 105,084,201 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.04100,955,585 - 100,956,580 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04165,716,388 - 165,717,032 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera494,231,904 - 94,232,899 (-)NCBICelera
Cytogenetic Map4q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

.
Variants in Phb1-ps4
11 total Variants

1 to 10 of 53 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat

1 to 10 of 53 rows





RefSeq Transcripts XM_006224964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006236693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_006224964   ⟹   XP_006225026
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera494,232,053 - 94,232,697 (-)NCBI
RefSeq Acc Id: XM_006236693   ⟹   XP_006236755
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.04165,716,388 - 165,717,032 (-)NCBI


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-44124 BioCyc
NCBI Gene LOC102550335 ENTREZGENE
PhenoGen Phb1-ps4 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Phb1-ps4  prohibitin 1, pseudogene 4  LOC102550335  prohibitin-like  Symbol and Name Changed 1299863 APPROVED
2013-12-18 LOC102550335  prohibitin-like      Symbol and Name status set to provisional 70820 PROVISIONAL