LOC102553253 (uncharacterized LOC102553253) - Rat Genome Database

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Gene: LOC102553253 (uncharacterized LOC102553253) Rattus norvegicus
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Symbol: LOC102553253
Name: uncharacterized LOC102553253
RGD ID: 7625496
Description:
Type: ncrna
RefSeq Status: MODEL
Previously known as: LOC102555153; uncharacterized LOC102555153
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81211,194,608 - 11,208,083 (-)NCBIGRCr8
mRatBN7.2126,158,385 - 6,168,368 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0127,278,269 - 7,284,014 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0129,365,115 - 9,370,702 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera127,922,087 - 7,927,674 (-)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102553253
78 total Variants

1 to 10 of 29 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat

1 to 10 of 29 rows





RefSeq Transcripts XR_010056696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_595238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_010056696
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81211,194,608 - 11,208,083 (-)NCBI
RefSeq Acc Id: XR_595238
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81211,194,611 - 11,205,066 (-)NCBI
mRatBN7.2126,158,385 - 6,168,368 (-)NCBI
Rnor_6.0127,278,269 - 7,284,014 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-20146 BioCyc
NCBI Gene LOC102553253 ENTREZGENE
PhenoGen LOC102553253 PhenoGen
RNAcentral URS0000CD03AF RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 LOC102553253  uncharacterized LOC102553253  LOC102555153  uncharacterized LOC102555153  Data merged from RGD:7624565 737654 PROVISIONAL
2013-12-18 LOC102553253  uncharacterized LOC102553253      Symbol and Name status set to provisional 70820 PROVISIONAL
2013-12-18 LOC102555153  uncharacterized LOC102555153      Symbol and Name status set to provisional 70820 PROVISIONAL