Bpgm (bisphosphoglycerate mutase) - Rat Genome Database

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Gene: Bpgm (bisphosphoglycerate mutase) Rattus norvegicus
Analyze
Symbol: Bpgm
Name: bisphosphoglycerate mutase
RGD ID: 735018
Description: Predicted to enable bisphosphoglycerate mutase activity. Involved in erythrocyte development. Human ortholog(s) of this gene implicated in familial erythrocytosis 8. Orthologous to human BPGM (bisphosphoglycerate mutase); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 2,3-bisphosphoglycerate mutase; Ab2-098; LOC296973
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8464,106,809 - 64,135,749 (+)NCBIGRCr8
mRatBN7.2463,139,730 - 63,168,581 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl463,140,018 - 63,168,581 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx468,098,223 - 68,126,740 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0464,013,920 - 64,042,437 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0462,416,337 - 62,444,854 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0461,912,210 - 61,940,697 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl461,912,210 - 61,940,696 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0461,650,881 - 61,679,069 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4461,858,884 - 61,888,007 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1462,135,013 - 62,164,136 (+)NCBI
Celera458,192,196 - 58,220,785 (+)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BpgmRatfamilial erythrocytosis 8  ISOBPGM (Homo sapiens)1600522DNA:point mutation and deletion: :p.R89C (human)RGD 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BpgmRatfamilial erythrocytosis 8  ISOBPGM (Homo sapiens)8554872ClinVar more ...ClinVarPMID:1421379 more ...
BpgmRatpleomorphic xanthoastrocytoma  ISOBPGM (Homo sapiens)8554872ClinVar Annotator: match by term: Pleomorphic xanthoastrocytomaClinVarPMID:28299358
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BpgmRatfamilial erythrocytosis 8  ISOBPGM (Homo sapiens)7240710 OMIM 

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BpgmRat(-)-epigallocatechin 3-gallate decreases expressionISOBPGM (Homo sapiens)6480464epigallocatechin gallate results in decreased expression of BPGM mRNACTDPMID:16084531
BpgmRat1,2-dimethylhydrazine increases expressionISOBpgm (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of BPGM mRNACTDPMID:22206623
BpgmRat1,2-dimethylhydrazine multiple interactionsISOBpgm (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of BPGM mRNA]CTDPMID:22206623
BpgmRat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of BPGM mRNACTDPMID:29097150
BpgmRat17beta-estradiol multiple interactionsISOBPGM (Homo sapiens)6480464[Estradiol co-treated with Progesterone] results in decreased expression of BPGM mRNACTDPMID:20660070
BpgmRat17beta-estradiol increases expressionISOBpgm (Mus musculus)6480464Estradiol results in increased expression of BPGM mRNACTDPMID:39298647
BpgmRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOBpgm (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of BPGM mRNACTDPMID:19933214
BpgmRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOBPGM (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of BPGM mRNACTDPMID:23152189
BpgmRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOBPGM (Homo sapiens)64804642-methyl-2H-pyrazole-3-carboxylic acid (2-methyl-4-o-tolylazophenyl)amide inhibits the reaction [Tetrachlorodibenzodioxin results in decreased expression of BPGM mRNA] and alpha-naphthoflavone inhibits the reaction [Tetrachlorodibenzodioxin results in decreased expression of BPGM mRNA]CTDPMID:23152189
BpgmRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of BPGM mRNACTDPMID:21215274 and PMID:33387578
BpgmRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464AHR protein alternative form affects the reaction [Tetrachlorodibenzodioxin results in decreased expression of BPGM mRNA]CTDPMID:21215274
BpgmRat3,3',5,5'-tetrabromobisphenol A decreases expressionISOBpgm (Mus musculus)6480464tetrabromobisphenol A results in decreased expression of BPGM mRNACTDPMID:25172293
BpgmRat3-methylcholanthrene increases expressionISOBpgm (Mus musculus)6480464Methylcholanthrene results in increased expression of BPGM mRNACTDPMID:20713471
BpgmRat4,4'-sulfonyldiphenol increases expressionISOBPGM (Homo sapiens)6480464bisphenol S results in increased expression of BPGM mRNACTDPMID:31121516
BpgmRat4,4'-sulfonyldiphenol increases expressionISOBpgm (Mus musculus)6480464bisphenol S results in increased expression of BPGM mRNACTDPMID:39298647
BpgmRat4-hydroxyphenyl retinamide decreases expressionISOBpgm (Mus musculus)6480464Fenretinide results in decreased expression of BPGM mRNACTDPMID:28973697
BpgmRatacrylamide decreases expressionEXP 6480464Acrylamide results in decreased expression of BPGM mRNACTDPMID:28959563
BpgmRatalpha-naphthoflavone multiple interactionsISOBPGM (Homo sapiens)6480464alpha-naphthoflavone inhibits the reaction [Tetrachlorodibenzodioxin results in decreased expression of BPGM mRNA]CTDPMID:23152189
BpgmRatalpha-naphthoflavone increases expressionISOBPGM (Homo sapiens)6480464alpha-naphthoflavone results in increased expression of BPGM mRNACTDPMID:23152189
BpgmRatantirheumatic drug increases expressionISOBPGM (Homo sapiens)6480464Antirheumatic Agents results in increased expression of BPGM mRNACTDPMID:24449571

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Biological Process
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1 to 11 of 11 rows

Molecular Function
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BpgmRatbisphosphoglycerate mutase activity enablesISOBpgm (Mus musculus)1624291MGI:6506869 PMID:32966787RGDPMID:32966787
BpgmRatbisphosphoglycerate mutase activity enablesIEAEC:5.4.2.41600115GO_REF:0000003UniProtGO_REF:0000003
BpgmRatcatalytic activity enablesIEAInterPro:IPR0013451600115GO_REF:0000002InterProGO_REF:0000002
BpgmRathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043
BpgmRatintramolecular phosphotransferase activity enablesIEAARBA:ARBA000269591600115GO_REF:0000117UniProtGO_REF:0000117
BpgmRatintramolecular phosphotransferase activity enablesIEAInterPro:IPR0059521600115GO_REF:0000002InterProGO_REF:0000002
BpgmRatisomerase activity enablesIEAUniProtKB-KW:KW-04131600115GO_REF:0000043UniProtGO_REF:0000043
BpgmRatphosphoglycerate mutase activity enablesIEAEC:5.4.2.111600115GO_REF:0000003UniProtGO_REF:0000003
BpgmRatprotein binding enablesISOBPGM (Homo sapiens)1624291UniProtKB:P15259 more ...RGDPMID:28514442 more ...
1 to 9 of 9 rows

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BpgmRatgluconeogenesis pathway   IEA 6907045 KEGGrno:00010
BpgmRatglycolysis pathway   IEA 6907045 KEGGrno:00010
BpgmRatglycolysis/gluconeogenesis pathway  IEA 6907045 KEGGrno:00010

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#
Reference Title
Reference Citation
1. Compound heterozygosity in a complete erythrocyte bisphosphoglycerate mutase deficiency. Lemarchandel V, etal., Blood. 1992 Nov 15;80(10):2643-9.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. Changes in enzyme activities involved in the degradation of 1,3-bisphosphoglycerate during erythropoiesis in rat bone marrow. Pineda M, etal., Cell Biochem Funct. 1984 Oct;2(4):254-6.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Comprehensive gene review and curation RGD comprehensive gene curation
10. Isolation, characterization, and structure of a mutant 89 Arg----Cys bisphosphoglycerate mutase. Implication of the active site in the mutation. Rosa R, etal., J Biol Chem 1989 May 15;264(14):7837-43.
11. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
1 to 11 of 11 rows
PMID:23533145  



Bpgm
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8464,106,809 - 64,135,749 (+)NCBIGRCr8
mRatBN7.2463,139,730 - 63,168,581 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl463,140,018 - 63,168,581 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx468,098,223 - 68,126,740 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0464,013,920 - 64,042,437 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0462,416,337 - 62,444,854 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0461,912,210 - 61,940,697 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl461,912,210 - 61,940,696 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0461,650,881 - 61,679,069 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4461,858,884 - 61,888,007 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1462,135,013 - 62,164,136 (+)NCBI
Celera458,192,196 - 58,220,785 (+)NCBICelera
Cytogenetic Map4q22NCBI
BPGM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387134,646,853 - 134,679,816 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7134,646,811 - 134,679,816 (+)EnsemblGRCh38hg38GRCh38
GRCh377134,331,605 - 134,364,568 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367133,982,095 - 134,015,108 (+)NCBINCBI36Build 36hg18NCBI36
Celera7129,068,953 - 129,101,988 (+)NCBICelera
Cytogenetic Map7q33NCBI
HuRef7128,633,382 - 128,666,417 (+)NCBIHuRef
CHM1_17134,265,830 - 134,298,456 (+)NCBICHM1_1
T2T-CHM13v2.07135,954,938 - 135,987,472 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27133,675,849 - 133,708,886 (+)NCBI
Bpgm
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39634,453,291 - 34,482,071 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl634,453,142 - 34,482,548 (+)EnsemblGRCm39 Ensembl
GRCm38634,476,356 - 34,505,136 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl634,476,207 - 34,505,613 (+)EnsemblGRCm38mm10GRCm38
MGSCv37634,426,356 - 34,455,610 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36634,406,514 - 34,435,768 (+)NCBIMGSCv36mm8
Celera634,470,380 - 34,505,653 (+)NCBICelera
Cytogenetic Map6B1NCBI
cM Map615.01NCBI
Bpgm
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554947,866,693 - 7,883,641 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554947,867,295 - 7,889,440 (-)NCBIChiLan1.0ChiLan1.0
BPGM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26171,460,435 - 171,495,458 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1723,470,693 - 23,505,705 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07126,605,151 - 126,637,934 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17139,111,512 - 139,144,487 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7139,123,318 - 139,144,487 (+)Ensemblpanpan1.1panPan2
BPGM
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11613,386,021 - 13,418,248 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1613,365,566 - 13,418,432 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1614,392,842 - 14,427,411 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01613,358,754 - 13,393,331 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1613,339,774 - 13,393,124 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11613,803,119 - 13,837,627 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01612,899,358 - 12,933,930 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01613,038,580 - 13,073,172 (-)NCBIUU_Cfam_GSD_1.0
Bpgm
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511821,009,042 - 21,032,454 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365791,141,598 - 1,164,630 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365791,141,637 - 1,164,554 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BPGM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1814,556,832 - 14,593,252 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11814,555,919 - 14,593,321 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21815,416,592 - 15,418,684 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BPGM
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121103,336,777 - 103,369,396 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21103,336,809 - 103,372,186 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666072236,243 - 268,628 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bpgm
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476515,145,011 - 15,163,978 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476515,139,919 - 15,162,721 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Bpgm
245 total Variants

Predicted Target Of
Summary Value
Count of predictions:97
Count of miRNA genes:80
Interacting mature miRNAs:88
Transcripts:ENSRNOT00000013569
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 54 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
61336Bp21Blood pressure QTL 214.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711470578881294Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42690728575585128Rat
61475Aia2Adjuvant induced arthritis QTL 25.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)43950527573892441Rat

1 to 10 of 54 rows
BF393409  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2463,162,184 - 63,162,281 (+)MAPPERmRatBN7.2
Rnor_6.0461,934,290 - 61,934,386NCBIRnor6.0
Rnor_5.0461,672,961 - 61,673,057UniSTSRnor5.0
RGSC_v3.4461,880,960 - 61,881,056UniSTSRGSC3.4
Celera458,214,270 - 58,214,366UniSTS
RH 3.4 Map4376.6UniSTS
Cytogenetic Map4q22UniSTS
RH138377  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2463,167,775 - 63,167,895 (+)MAPPERmRatBN7.2
Rnor_6.0461,939,892 - 61,940,011NCBIRnor6.0
Rnor_5.0461,678,264 - 61,678,383UniSTSRnor5.0
RGSC_v3.4461,887,202 - 61,887,321UniSTSRGSC3.4
Celera458,219,980 - 58,220,099UniSTS
RH 3.4 Map4376.0UniSTS
Cytogenetic Map4q22UniSTS
RH132040  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2463,168,301 - 63,168,499 (+)MAPPERmRatBN7.2
Rnor_6.0461,940,418 - 61,940,615NCBIRnor6.0
Rnor_5.0461,678,790 - 61,678,987UniSTSRnor5.0
RGSC_v3.4461,887,728 - 61,887,925UniSTSRGSC3.4
Celera458,220,506 - 58,220,703UniSTS
RH 3.4 Map4376.0UniSTS
Cytogenetic Map4q22UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000013569   ⟹   ENSRNOP00000013566
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl463,140,018 - 63,168,581 (+)Ensembl
Rnor_6.0 Ensembl461,912,210 - 61,940,696 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000090717   ⟹   ENSRNOP00000070911
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl463,151,908 - 63,168,459 (+)Ensembl
Rnor_6.0 Ensembl461,924,013 - 61,940,573 (+)Ensembl
RefSeq Acc Id: NM_199382   ⟹   NP_955414
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8464,107,277 - 64,135,749 (+)NCBI
mRatBN7.2463,140,109 - 63,168,581 (+)NCBI
Rnor_6.0461,912,210 - 61,940,697 (+)NCBI
Rnor_5.0461,650,881 - 61,679,069 (+)NCBI
RGSC_v3.4461,858,884 - 61,888,007 (+)RGD
Celera458,192,196 - 58,220,785 (+)RGD
Sequence:
RefSeq Acc Id: XM_006236259   ⟹   XP_006236321
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8464,117,638 - 64,135,749 (+)NCBI
mRatBN7.2463,150,852 - 63,168,581 (+)NCBI
Rnor_6.0461,922,941 - 61,940,697 (+)NCBI
Rnor_5.0461,650,881 - 61,679,069 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039107293   ⟹   XP_038963221
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8464,106,809 - 64,135,749 (+)NCBI
mRatBN7.2463,139,730 - 63,168,581 (+)NCBI
RefSeq Acc Id: XM_063285747   ⟹   XP_063141817
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8464,107,231 - 64,135,749 (+)NCBI
RefSeq Acc Id: NP_955414   ⟸   NM_199382
- UniProtKB: Q6P6G4 (UniProtKB/TrEMBL),   F7F6N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006236321   ⟸   XM_006236259
- Peptide Label: isoform X1
- UniProtKB: Q6P6G4 (UniProtKB/TrEMBL),   F7F6N0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000070911   ⟸   ENSRNOT00000090717
Ensembl Acc Id: ENSRNOP00000013566   ⟸   ENSRNOT00000013569
RefSeq Acc Id: XP_038963221   ⟸   XM_039107293
- Peptide Label: isoform X1
- UniProtKB: Q6P6G4 (UniProtKB/TrEMBL),   F7F6N0 (UniProtKB/TrEMBL)

Name Modeler Protein Id AA Range Protein Structure
AF-Q7TP58-F1-model_v2 AlphaFold Q7TP58 1-395 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13692954
Promoter ID:EPDNEW_R3478
Type:initiation region
Name:Bpgm_1
Description:bisphosphoglycerate mutase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0461,912,210 - 61,912,270EPDNEW


1 to 27 of 27 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-45274 BioCyc
BioCyc Pathway PWY-6405 [Rapoport-Luebering glycolytic shunt] BioCyc
BioCyc Pathway Image PWY-6405 BioCyc
Ensembl Genes ENSRNOG00000010133 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013569 ENTREZGENE
  ENSRNOT00000013569.5 UniProtKB/TrEMBL
  ENSRNOT00000090717.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1240 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:6887677 IMAGE-MGC_LOAD
InterPro His_Pase_superF_clade-1 UniProtKB/TrEMBL
  His_PPase_superfam UniProtKB/TrEMBL
  PG/BPGM_mutase_AS UniProtKB/TrEMBL
  Phosphogly_mut1 UniProtKB/TrEMBL
KEGG Report rno:296973 UniProtKB/TrEMBL
MGC_CLONE MGC:72978 IMAGE-MGC_LOAD
NCBI Gene 296973 ENTREZGENE
PANTHER Phosphogly_mut1 UniProtKB/TrEMBL
Pfam PGAM UniProtKB/TrEMBL
PhenoGen Bpgm PhenoGen
PIRSF 6PFK_2-Ptase UniProtKB/TrEMBL
PROSITE PG_MUTASE UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010133 RatGTEx
SMART PGAM UniProtKB/TrEMBL
Superfamily-SCOP SSF53254 UniProtKB/TrEMBL
UniProt F7F6N0 ENTREZGENE, UniProtKB/TrEMBL
  Q6P6G4 ENTREZGENE, UniProtKB/TrEMBL
  Q7TP58_RAT UniProtKB/TrEMBL
1 to 27 of 27 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-02 Bpgm  bisphosphoglycerate mutase  Bpgm  2,3-bisphosphoglycerate mutase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Bpgm  2,3-bisphosphoglycerate mutase  LOC296973    Symbol updated 1299863 APPROVED