Plin2 (perilipin 2) - Rat Genome Database

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Gene: Plin2 (perilipin 2) Mus musculus
Analyze
Symbol: Plin2
Name: perilipin 2
RGD ID: 730883
MGI Page MGI
Description: Acts upstream of or within lipid storage and long-chain fatty acid transport. Located in several cellular components, including cytosol; lipid droplet; and nucleus. Is expressed in hindlimb tendon and pancreas epithelium. Orthologous to human PLIN2 (perilipin 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A; AA407157; AD; Adfp; adipophilin; adipose differentiation related protein; adipose differentiation-related protein; ADPH; Adrp; perilipin-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Adfp-ps   Gm12551   Gm3440  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39486,545,147 - 86,588,518 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl486,566,623 - 86,588,297 (-)EnsemblGRCm39 Ensembl
GRCm38486,626,910 - 86,670,217 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl486,648,386 - 86,670,060 (-)EnsemblGRCm38mm10GRCm38
MGSCv37486,302,469 - 86,315,963 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36486,127,797 - 86,141,225 (-)NCBIMGSCv36mm8
Celera485,171,641 - 85,185,400 (-)NCBICelera
Cytogenetic Map4C4NCBI
cM Map440.69NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
(S)-nicotine  (EXP)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1,3-dinitrobenzene  (ISO)
1,4-phenylenediamine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP,ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-(4-chlorophenyl)imidazo[2,1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime  (ISO)
6-propyl-2-thiouracil  (ISO)
acetylsalicylic acid  (ISO)
aconitine  (ISO)
acrylamide  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-linolenic acid  (EXP,ISO)
amphetamine  (ISO)
arachidonic acid  (EXP,ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
atorvastatin calcium  (ISO)
atrazine  (ISO)
avobenzone  (ISO)
benzene-1,2,4-triol  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzoates  (ISO)
beta-naphthoflavone  (ISO)
bezafibrate  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
boron nitride  (ISO)
bromobenzene  (ISO)
buspirone  (ISO)
butanal  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
camptothecin  (ISO)
cannabidiol  (EXP)
capsaicin  (ISO)
carbon nanotube  (EXP,ISO)
carnosic acid  (EXP)
celecoxib  (ISO)
chloropicrin  (ISO)
chloroprene  (ISO)
chlorpromazine  (ISO)
chromium(6+)  (ISO)
ciglitazone  (ISO)
ciprofibrate  (EXP,ISO)
cisplatin  (EXP,ISO)
clofibrate  (EXP,ISO)
clofibric acid  (ISO)
Clofop  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
corn oil  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (ISO)
cyclosporin A  (EXP,ISO)
dapagliflozin  (ISO)
DDE  (ISO)
deguelin  (ISO)
deoxynivalenol  (ISO)
desferrioxamine B  (ISO)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
dibenzo[a,l]pyrene  (EXP)
dibutyl phthalate  (EXP,ISO)
dichloroacetic acid  (EXP)
diethyl malate  (ISO)
diethyl maleate  (ISO)
dioxygen  (EXP,ISO)
diquat  (EXP)
diuron  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP,ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
farnesol  (ISO)
fenofibrate  (ISO)
fenpyroximate  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
fructose  (ISO)
fumonisin B1  (EXP)
gamma-linolenic acid  (ISO)
gemfibrozil  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
glutathione  (EXP)
GW 4064  (ISO)
GW 501516  (ISO)
GW 7647  (ISO)
hexadecanoic acid  (ISO)
ibuprofen  (ISO)
indole-3-methanol  (ISO)
indometacin  (ISO)
inulin  (EXP)
isotretinoin  (ISO)
ivermectin  (ISO)
lead diacetate  (EXP)
leflunomide  (ISO)
Licarin A  (EXP)
Licochalcone B  (ISO)
lidocaine  (ISO)
malathion  (ISO)
metformin  (ISO)
methapyrilene  (ISO)
methotrexate  (EXP,ISO)
methyl methanesulfonate  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
Monobutylphthalate  (EXP)
Muraglitazar  (ISO)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (EXP)
N-acetyl-L-cysteine  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
naproxen  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
nicotine  (EXP)
nimesulide  (ISO)
nitrofen  (ISO)
Nutlin-3  (ISO)
ochratoxin A  (ISO)
octadecanoic acid  (ISO)
oleic acid  (EXP,ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
parathion  (EXP)
perflubutane  (ISO)
perfluorobutanesulfonic acid  (ISO)
perfluorobutyric acid  (ISO)
perfluorodecanoic acid  (ISO)
perfluorododecanoic acid  (ISO)
perfluoroheptanoic acid  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorohexanoic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
perfluoroundecanoic acid  (ISO)
phenformin  (ISO)
phenobarbital  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pioglitazone  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
potassium dichromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
probenecid  (ISO)
propiconazole  (EXP)
quinolin-8-ol  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rimonabant  (EXP)
rotenone  (ISO)
senecionine  (EXP)
serpentine asbestos  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
Soman  (ISO)
steviol  (EXP)
stevioside  (EXP)
streptozocin  (ISO)
sumatriptan  (ISO)
sunitinib  (ISO)
Tesaglitazar  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP,ISO)
tetrathiomolybdate(2-)  (ISO)
thioacetamide  (EXP,ISO)
thiram  (ISO)
titanium dioxide  (EXP)
tolcapone  (ISO)
topotecan  (ISO)
tributylstannane  (EXP)
Tributyltin oxide  (EXP)
triphenyl phosphate  (ISO)
triptonide  (EXP)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (EXP,ISO)
valproic acid  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IDA)
cytosol  (IBA,IDA,TAS)
lipid droplet  (IBA,IDA,ISO,TAS)
nucleus  (IDA)
plasma membrane  (IDA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mapping genes in the mouse using single-strand conformation polymorphism analysis of recombinant inbred strains and interspecific crosses. Beier DR, etal., Proc Natl Acad Sci U S A 1992 Oct 1;89(19):9102-6.
2. Reduction of hepatosteatosis and lipid levels by an adipose differentiation-related protein antisense oligonucleotide. Imai Y, etal., Gastroenterology. 2007 May;132(5):1947-54. Epub 2007 Feb 23.
3. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Large-scale screen for genes controlling mammalian embryogenesis, using high-throughput gene expression analysis in mouse embryos. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
7. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
9. Mouse MP Annotation Import Pipeline RGD automated import pipeline
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. CGI-58 interacts with perilipin and is localized to lipid droplets. Possible involvement of CGI-58 mislocalization in Chanarin-Dorfman syndrome. Yamaguchi T, etal., J Biol Chem 2004 Jul 16;279(29):30490-7. Epub 2004 May 10.
Additional References at PubMed
PMID:1518805   PMID:7916309   PMID:8325636   PMID:8502564   PMID:10349636   PMID:10358026   PMID:10591541   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11978849   PMID:12217895  
PMID:12477932   PMID:12562852   PMID:12591929   PMID:12804567   PMID:14610273   PMID:15075187   PMID:15336557   PMID:15731108   PMID:15782199   PMID:16115879   PMID:16141072   PMID:16141073  
PMID:16230742   PMID:16403437   PMID:16428458   PMID:16489205   PMID:16571721   PMID:16581799   PMID:16602821   PMID:16950122   PMID:16968708   PMID:17452747   PMID:17463056   PMID:17872589  
PMID:17921437   PMID:18085354   PMID:18188933   PMID:18188934   PMID:18393390   PMID:18483409   PMID:18487449   PMID:18554416   PMID:18606814   PMID:18669627   PMID:18684741   PMID:18692037  
PMID:18697835   PMID:18854426   PMID:19383873   PMID:19416849   PMID:19698802   PMID:19699172   PMID:20030713   PMID:20382704   PMID:20424269   PMID:20484013   PMID:20529882   PMID:20710016  
PMID:20883652   PMID:21267068   PMID:21383012   PMID:21430261   PMID:21566665   PMID:21677750   PMID:21873635   PMID:21878492   PMID:22028793   PMID:22139132   PMID:22426621   PMID:22427949  
PMID:22661308   PMID:22685330   PMID:22744009   PMID:22807032   PMID:23012396   PMID:23023706   PMID:23056214   PMID:23402988   PMID:23505042   PMID:23688400   PMID:23928401   PMID:23962454  
PMID:24040030   PMID:24253218   PMID:24793170   PMID:24831094   PMID:24875360   PMID:24927580   PMID:25338003   PMID:25512113   PMID:25595097   PMID:25662615   PMID:25961502   PMID:26147095  
PMID:26398943   PMID:26439735   PMID:26487692   PMID:26511927   PMID:26598603   PMID:26876687   PMID:26902588   PMID:26968211   PMID:26984772   PMID:27109481   PMID:27185876   PMID:27412481  
PMID:27453055   PMID:27624101   PMID:27679530   PMID:27867035   PMID:28102311   PMID:28408205   PMID:28548876   PMID:28713961   PMID:28822960   PMID:28827394   PMID:28851734   PMID:28877764  
PMID:29045046   PMID:29099637   PMID:29251627   PMID:29866659   PMID:30536914   PMID:30651296   PMID:30782775   PMID:30973865   PMID:31061399   PMID:31570772   PMID:31661297   PMID:31768046  
PMID:32046118   PMID:32387304   PMID:32554809   PMID:32585124   PMID:32683072   PMID:33057360   PMID:33319243   PMID:33713834   PMID:33784258   PMID:34541006   PMID:34857752   PMID:36577717  
PMID:37010675   PMID:37057345   PMID:37195149   PMID:37419179   PMID:37844775   PMID:37914940   PMID:38141848   PMID:38295182   PMID:38355793   PMID:38942786   PMID:39187042  


Genomics

Comparative Map Data
Plin2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39486,545,147 - 86,588,518 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl486,566,623 - 86,588,297 (-)EnsemblGRCm39 Ensembl
GRCm38486,626,910 - 86,670,217 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl486,648,386 - 86,670,060 (-)EnsemblGRCm38mm10GRCm38
MGSCv37486,302,469 - 86,315,963 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36486,127,797 - 86,141,225 (-)NCBIMGSCv36mm8
Celera485,171,641 - 85,185,400 (-)NCBICelera
Cytogenetic Map4C4NCBI
cM Map440.69NCBI
PLIN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38919,108,388 - 19,127,492 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl919,108,375 - 19,149,290 (-)EnsemblGRCh38hg38GRCh38
GRCh37919,115,759 - 19,127,490 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36919,105,759 - 19,117,573 (-)NCBINCBI36Build 36hg18NCBI36
Build 34919,105,759 - 19,117,573NCBI
Celera919,041,952 - 19,053,704 (-)NCBICelera
Cytogenetic Map9p22.1NCBI
HuRef919,077,611 - 19,089,275 (-)NCBIHuRef
CHM1_1919,115,770 - 19,127,537 (-)NCBICHM1_1
T2T-CHM13v2.0919,128,612 - 19,140,276 (-)NCBIT2T-CHM13v2.0
Plin2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85106,202,634 - 106,258,748 (-)NCBIGRCr8
mRatBN7.25101,156,648 - 101,211,738 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5101,154,411 - 101,242,319 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5103,538,038 - 103,564,407 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05105,328,590 - 105,354,959 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05105,361,730 - 105,388,111 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05104,984,413 - 105,010,863 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5104,984,414 - 105,010,857 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05108,972,976 - 108,999,210 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45105,718,496 - 105,732,817 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15105,723,721 - 105,738,043 (-)NCBI
Celera599,654,064 - 99,667,851 (-)NCBICelera
Cytogenetic Map5q32NCBI
Plin2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543421,574,292 - 21,580,988 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543421,573,860 - 21,580,990 (-)NCBIChiLan1.0ChiLan1.0
PLIN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v211105,309,502 - 105,428,196 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan19105,315,440 - 105,434,133 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0918,928,455 - 18,951,132 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1919,421,928 - 19,537,676 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl919,421,928 - 19,462,222 (-)Ensemblpanpan1.1panPan2
PLIN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11138,940,063 - 38,959,126 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1138,940,065 - 38,959,070 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1137,598,800 - 37,617,859 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01139,873,157 - 39,892,049 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1139,873,157 - 39,891,976 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11138,566,314 - 38,585,390 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01138,361,251 - 38,380,316 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01138,998,438 - 39,017,321 (-)NCBIUU_Cfam_GSD_1.0
Plin2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947153,369,919 - 153,390,479 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366521,039,259 - 1,060,122 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366521,039,248 - 1,059,983 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLIN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1203,683,862 - 203,709,273 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11203,683,867 - 203,709,277 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21227,334,036 - 227,357,123 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103219401
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11260,526,394 - 60,606,262 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1260,590,222 - 60,610,727 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236665992,224 - 20,825 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plin2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473623,111,265 - 23,122,193 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473623,114,149 - 23,122,634 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:848
Count of miRNA genes:460
Interacting mature miRNAs:515
Transcripts:ENSMUST00000000466, ENSMUST00000134094, ENSMUST00000134437, ENSMUST00000138605, ENSMUST00000140382, ENSMUST00000147097, ENSMUST00000149700, ENSMUST00000154999
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11532714Sluc43_msusceptibility to lung cancer 43 (mouse)446642108123127211Mouse
13506251Cytrq1_mcytokine response QTL 1 (mouse)46571808699718086Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
1357726Lnopy1_mlens opacity 1 (mouse)Not determined485428838119429037Mouse
11532708Sluc43i_msusceptibility to lung cancer 43i (mouse)474444699108444983Mouse
11532707Sluc43h_msusceptibility to lung cancer 43h (mouse)474444699108444983Mouse
11532706Sluc43c_msusceptibility to lung cancer 43c (mouse)474444699108444983Mouse
11532705Sluc43b_msusceptibility to lung cancer 43b (mouse)474444699108444983Mouse
10412176Habiir3_mhyperoxic acute lung injury imprinted region 3 (mouse)Not determined48375713094293740Mouse
1302044Nss1_mNOD Sjogren's syndrome 1 (mouse)Not determined471982069105982216Mouse
11532704Sluc43a_msusceptibility to lung cancer 43a (mouse)474444699108444983Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
1302031Bulb1_mbulb size 1 (mouse)Not determined474033887108034029Mouse
27095939Ulnl9_mulna length 9, 16 week (mouse)465318237118857197Mouse
27095938Ulnl6_mulna length 6, 10 week (mouse)46671823798588237Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
12904933Edlmmq3_mextensor digitorum longus muscle mass QTL 3 (mouse)481213991115213991Mouse
10043964Obq26_mobesity QTL 26 (mouse)Not determined45904725193047251Mouse
13524841Hbasrq1_mhabituation of the acoustic startle response QTL 1 (mouse)45447158988471589Mouse
1301556Cd4vts1_mCD4 virgin T cell subset 1 (mouse)Not determined485428838119429037Mouse
13524838Hbasrq1a_mhabituation of the acoustic startle response QTL 1a (mouse)45447158988471589Mouse
26884406Huml3_mhumerus length 3, 10 week (mouse)475618237100157197Mouse
1302204Spm1_msplenomegaly modifier (mouse)Not determined482244395116244582Mouse
11532703Sluc43g_msusceptibility to lung cancer 43g (mouse)474444699108444983Mouse
11532702Sluc43f_msusceptibility to lung cancer 43f (mouse)474444699108444983Mouse
11532701Sluc43e_msusceptibility to lung cancer 43e (mouse)474444699108444983Mouse
1558948Ath8_matherosclerosis 8 (mouse)Not determined445658442105156995Mouse
11532700Sluc43d_msusceptibility to lung cancer 43d (mouse)474444699108444983Mouse
11039517Ltpr4_mLeishmania tropica response 4 (mouse)479365751113365867Mouse
11039504Ltpr4a_mLeishmania tropica response 4a (mouse)479365751113365867Mouse
11039505Ltpr4c_mLeishmania tropica response 4c (mouse)479365751113365867Mouse
1301930Papg1_mpulmonary adenoma progression 1 (mouse)Not determined485781167119781279Mouse
1301033Abbp2_mA/J and C57BL/6 blood pressure 2 (mouse)Not determined45355083993763305Mouse
1357870Pfat1_mpredicted fat percentage 1 (mouse)Not determined46361952697619685Mouse
1302057Pgia27_mproteoglycan induced arthritis 27 (mouse)Not determined470067227104067464Mouse
1301545Gauc_mglucose area under curve (mouse)Not determined476763107110763305Mouse
11039506Ltpr4b_mLeishmania tropica response 4b (mouse)479365751113365867Mouse
27226787Feml14_mfemur length 14, 10 week (mouse)484918237107157197Mouse
10412193Plep_mplasma lepin levels (mouse)Not determined474444699108444983Mouse
27095900Scvln9_msacral vertebrae length 2, 10 week (mouse)468018237107157197Mouse
4142203Lyr_mlymphoma resistance (mouse)Not determined8075244588769188Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
26884434Zlq1_mzygomatic length QTL 1, 5 week (mouse)453700000103257197Mouse
26884435Zlq4_mzygomatic length QTL 4, 10 week (mouse)485118237104957197Mouse
1300697Sle2_msystemic lupus erythmatosus susceptibility 2 (mouse)Not determined477957579111957775Mouse
1301597Anxty_manxiety (mouse)Not determined474137574128009280Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
12880404Embq1_memotional behavior QTL 1 (mouse)46575720395921546Mouse
1301827Cocrb5_mcocaine related behavior 5 (mouse)Not determined48656662386588297Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
1301190Cd4ts2_mCD4 T cell subset 2 (mouse)Not determined46014527794145424Mouse
26884431Zlq8_mzygomatic length QTL 8, 16 week (mouse)474718237108357197Mouse
1357507Synch2_msynechia 2 (mouse)Not determined46014527794145424Mouse
12879903Berr8_mberghei resistance locus 8 (mouse)46422246098222460Mouse
13207572Spir2_mStreptococcus pneumoniae infection resistance 2 (mouse)45068279588510637Mouse
12879897Berr4_mberghei resistance locus 4 (mouse)471982069105982216Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
27095934Ulnl2_mulna length 2, 5 week (mouse)45770000094788237Mouse
12904738Idohtq_miris defect with ocular hypertension QTL (mouse)48075246793112991Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
27095924Pglq2_mpelvic girdle length QTL 2, 5 week (mouse)469118237130727311Mouse
27095921Pglq12_mpelvic girdle length QTL 12, 16 week (mouse)483118237108357197Mouse
1357561Mbsyd_mmetabolic syndrome (mouse)Not determined466888445100888588Mouse
1301118Bbaa23_mB.burgdorferi-associated arthritis 23 (mouse)Not determined485781167119781279Mouse
1301757Tlsr4_mthymic lymphoma suppressor region 4 (mouse)Not determined466757130100757258Mouse
27095917Scvln14_msacral vertebrae length 2, 16 week (mouse)468018237130277062Mouse
4141900Skts-fp1_mskin tumor susceptibility in FVB and PWK 1 (mouse)Not determined453550839124055180Mouse
1300966Pabr2_mplasma apolipoprotein B (human) regulator 2 (mouse)Not determined446332646105801860Mouse
1301739Pitm2_mprion incubation time 2 (mouse)Not determined471982069105982216Mouse
1301867Idd11_minsulin dependent diabetes susceptibility 11 (mouse)Not determined483604870117605006Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
27226724Tibw2_mtibia width 2, proximal, 10 week (mouse)443000000108357197Mouse
27095905Scvln3_msacral vertebrae length 2, 5 week (mouse)455600000128993793Mouse

Markers in Region
RH124572  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38486,656,720 - 86,656,920UniSTSGRCm38
GRCm38486,626,870 - 86,627,065UniSTSGRCm38
MGSCv37486,302,624 - 86,302,824UniSTSGRCm37
MGSCv37486,272,774 - 86,272,969UniSTSGRCm37
Celera485,141,493 - 85,141,688UniSTS
Celera485,171,796 - 85,171,996UniSTS
Cytogenetic Map4C4UniSTS
cM Map438.9UniSTS
Adfp  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38486,656,536 - 86,656,660UniSTSGRCm38
MGSCv37486,302,440 - 86,302,564UniSTSGRCm37
Celera485,171,612 - 85,171,736UniSTS
Cytogenetic Map4C4UniSTS
cM Map438.9UniSTS
Adfp-rs  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38486,668,502 - 86,668,671UniSTSGRCm38
MGSCv37486,314,406 - 86,314,575UniSTSGRCm37
Celera485,183,843 - 85,184,012UniSTS
Cytogenetic Map4C4UniSTS
cM Map433.7UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001403711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK002911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL824707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY035850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY035851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC047124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY297427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L09734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M93275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000000466   ⟹   ENSMUSP00000000466
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl486,574,802 - 86,588,297 (-)Ensembl
GRCm38.p6 Ensembl486,656,565 - 86,670,060 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134094
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl486,585,902 - 86,588,223 (-)Ensembl
GRCm38.p6 Ensembl486,667,665 - 86,669,986 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134437
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl486,575,393 - 86,577,385 (-)Ensembl
GRCm38.p6 Ensembl486,657,156 - 86,659,148 (-)Ensembl
Ensembl Acc Id: ENSMUST00000138605
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl486,575,144 - 86,576,881 (-)Ensembl
GRCm38.p6 Ensembl486,656,907 - 86,658,644 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140382   ⟹   ENSMUSP00000123456
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl486,580,171 - 86,588,005 (-)Ensembl
GRCm38.p6 Ensembl486,661,934 - 86,669,768 (-)Ensembl
Ensembl Acc Id: ENSMUST00000147097   ⟹   ENSMUSP00000119063
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl486,578,358 - 86,583,962 (-)Ensembl
GRCm38.p6 Ensembl486,660,121 - 86,665,725 (-)Ensembl
Ensembl Acc Id: ENSMUST00000149700   ⟹   ENSMUSP00000123333
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl486,580,171 - 86,587,797 (-)Ensembl
GRCm38.p6 Ensembl486,661,934 - 86,669,560 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl486,566,623 - 86,576,920 (-)Ensembl
GRCm38.p6 Ensembl486,648,386 - 86,658,683 (-)Ensembl
RefSeq Acc Id: NM_001403711   ⟹   NP_001390640
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,574,942 - 86,588,231 (-)NCBI
RefSeq Acc Id: NM_001403712   ⟹   NP_001390641
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,574,942 - 86,588,231 (-)NCBI
RefSeq Acc Id: NM_001403713   ⟹   NP_001390642
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,574,942 - 86,587,739 (-)NCBI
RefSeq Acc Id: NM_001403714   ⟹   NP_001390643
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,574,942 - 86,587,739 (-)NCBI
RefSeq Acc Id: NM_001403715   ⟹   NP_001390644
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,574,942 - 86,587,739 (-)NCBI
RefSeq Acc Id: NM_001403716   ⟹   NP_001390645
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,565,917 - 86,588,231 (-)NCBI
RefSeq Acc Id: NM_001403717   ⟹   NP_001390646
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,565,917 - 86,588,231 (-)NCBI
RefSeq Acc Id: NM_001403718   ⟹   NP_001390647
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,565,917 - 86,588,231 (-)NCBI
RefSeq Acc Id: NM_001403719   ⟹   NP_001390648
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,565,917 - 86,587,739 (-)NCBI
RefSeq Acc Id: NM_001403720   ⟹   NP_001390649
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,565,917 - 86,587,739 (-)NCBI
RefSeq Acc Id: NM_001403721   ⟹   NP_001390650
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,574,942 - 86,588,231 (-)NCBI
RefSeq Acc Id: NM_001403722   ⟹   NP_001390651
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,574,942 - 86,587,739 (-)NCBI
RefSeq Acc Id: NM_007408   ⟹   NP_031434
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,574,942 - 86,588,231 (-)NCBI
GRCm38486,656,565 - 86,670,059 (-)NCBI
MGSCv37486,302,469 - 86,315,963 (-)RGD
Celera485,171,641 - 85,185,400 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011249907   ⟹   XP_011248209
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39486,545,147 - 86,588,518 (-)NCBI
GRCm38486,626,910 - 86,670,217 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001390640 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390641 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390642 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390643 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390644 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390645 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390646 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390647 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390648 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390649 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390650 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390651 (Get FASTA)   NCBI Sequence Viewer  
  NP_031434 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248209 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA37176 (Get FASTA)   NCBI Sequence Viewer  
  AAH54766 (Get FASTA)   NCBI Sequence Viewer  
  AAK63075 (Get FASTA)   NCBI Sequence Viewer  
  AAK63076 (Get FASTA)   NCBI Sequence Viewer  
  BAB27332 (Get FASTA)   NCBI Sequence Viewer  
  BAC37483 (Get FASTA)   NCBI Sequence Viewer  
  BAE29361 (Get FASTA)   NCBI Sequence Viewer  
  BAE30931 (Get FASTA)   NCBI Sequence Viewer  
  BAE31081 (Get FASTA)   NCBI Sequence Viewer  
  BAE31562 (Get FASTA)   NCBI Sequence Viewer  
  BAE31815 (Get FASTA)   NCBI Sequence Viewer  
  BAE32690 (Get FASTA)   NCBI Sequence Viewer  
  BAE39285 (Get FASTA)   NCBI Sequence Viewer  
  EDL30998 (Get FASTA)   NCBI Sequence Viewer  
  EDL30999 (Get FASTA)   NCBI Sequence Viewer  
  EDL31000 (Get FASTA)   NCBI Sequence Viewer  
  EDL31001 (Get FASTA)   NCBI Sequence Viewer  
  EDL31002 (Get FASTA)   NCBI Sequence Viewer  
  EDL31003 (Get FASTA)   NCBI Sequence Viewer  
  EDL31004 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000000466
  ENSMUSP00000000466.7
  ENSMUSP00000119063.2
  ENSMUSP00000123333.2
  ENSMUSP00000123456.2
GenBank Protein P43883 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_031434   ⟸   NM_007408
- Peptide Label: isoform 1
- UniProtKB: Q8K3Q8 (UniProtKB/Swiss-Prot),   P43883 (UniProtKB/Swiss-Prot),   Q3U711 (UniProtKB/TrEMBL),   Q541S0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248209   ⟸   XM_011249907
- Peptide Label: isoform X2
- UniProtKB: Q3U711 (UniProtKB/TrEMBL),   Q541S0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000119063   ⟸   ENSMUST00000147097
Ensembl Acc Id: ENSMUSP00000000466   ⟸   ENSMUST00000000466
Ensembl Acc Id: ENSMUSP00000123333   ⟸   ENSMUST00000149700
Ensembl Acc Id: ENSMUSP00000123456   ⟸   ENSMUST00000140382
RefSeq Acc Id: NP_001390645   ⟸   NM_001403716
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390646   ⟸   NM_001403717
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390647   ⟸   NM_001403718
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390648   ⟸   NM_001403719
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390649   ⟸   NM_001403720
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390650   ⟸   NM_001403721
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001390640   ⟸   NM_001403711
- Peptide Label: isoform 1
- UniProtKB: P43883 (UniProtKB/Swiss-Prot),   Q8K3Q8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390641   ⟸   NM_001403712
- Peptide Label: isoform 1
- UniProtKB: P43883 (UniProtKB/Swiss-Prot),   Q8K3Q8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390642   ⟸   NM_001403713
- Peptide Label: isoform 1
- UniProtKB: P43883 (UniProtKB/Swiss-Prot),   Q8K3Q8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390643   ⟸   NM_001403714
- Peptide Label: isoform 1
- UniProtKB: P43883 (UniProtKB/Swiss-Prot),   Q8K3Q8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390651   ⟸   NM_001403722
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001390644   ⟸   NM_001403715
- Peptide Label: isoform 1
- UniProtKB: P43883 (UniProtKB/Swiss-Prot),   Q8K3Q8 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P43883-F1-model_v2 AlphaFold P43883 1-425 view protein structure

Promoters
RGD ID:6834780
Promoter ID:MM_KWN:38275
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Liver,   MEF_B6
Transcripts:OTTMUST00000017242,   OTTMUST00000017243,   OTTMUST00000017648
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36486,304,491 - 86,305,872 (-)MPROMDB
RGD ID:6834782
Promoter ID:MM_KWN:38276
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:OTTMUST00000051107
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36486,311,351 - 86,312,507 (-)MPROMDB
RGD ID:6834781
Promoter ID:MM_KWN:38277
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000017238,   OTTMUST00000017239,   OTTMUST00000017240,   OTTMUST00000017241
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36486,315,381 - 86,316,922 (-)MPROMDB
RGD ID:6883770
Promoter ID:EPDNEW_M5336
Type:initiation region
Name:Plin2_2
Description:Mus musculus perilipin 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5337  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38486,669,500 - 86,669,560EPDNEW
RGD ID:6883772
Promoter ID:EPDNEW_M5337
Type:initiation region
Name:Plin2_1
Description:Mus musculus perilipin 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5336  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38486,669,994 - 86,670,054EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:87920 AgrOrtholog
Ensembl Genes ENSMUSG00000028494 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000000466 ENTREZGENE
  ENSMUST00000000466.13 UniProtKB/Swiss-Prot
  ENSMUST00000140382.3 UniProtKB/TrEMBL
  ENSMUST00000147097.3 UniProtKB/TrEMBL
  ENSMUST00000149700.8 UniProtKB/TrEMBL
Gene3D-CATH Flagellar protein FliS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Perilipin, alpha-beta domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Perilipin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11520 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:87920 ENTREZGENE
NCBI Gene 11520 ENTREZGENE
PANTHER PERILIPIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PERILIPIN-2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Perilipin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Plin2 PhenoGen
PIRSF PAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1AXR3_MOUSE UniProtKB/TrEMBL
  B1AXR5_MOUSE UniProtKB/TrEMBL
  P43883 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3U711 ENTREZGENE, UniProtKB/TrEMBL
  Q541S0 ENTREZGENE, UniProtKB/TrEMBL
  Q8C5B5_MOUSE UniProtKB/TrEMBL
  Q8K3Q8 ENTREZGENE
  Q9CY19_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q8K3Q8 UniProtKB/Swiss-Prot