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Gene: Sdccag8 (SHH signaling and ciliogenesis regulator SDCCAG8) Rattus norvegicus
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Symbol: Sdccag8
Name: SHH signaling and ciliogenesis regulator SDCCAG8
Description: Predicted to be involved in several processes, including microtubule organizing center organization; neuron migration; and regulation of cilium assembly. Predicted to localize to several cellular components, including the cell-cell junction; microtubule organizing center; and photoreceptor cell cilium. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 16 and Senior-Loken syndrome. Orthologous to human SDCCAG8 (serologically defined colon cancer antigen 8); INTERACTS WITH ammonium chloride; bisphenol A; N-methyl-4-phenylpyridinium.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305002; MGC93052; serologically defined colon cancer antigen 8; serologically defined colon cancer antigen 8 homolog; slinky
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01394,888,046 - 95,100,833 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1394,888,078 - 95,112,033 (+)Ensembl
Rnor_5.01399,341,101 - 99,552,432 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41392,612,281 - 92,802,650 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11392,801,164 - 92,991,534 (+)NCBI
Celera1388,335,057 - 88,523,670 (+)NCBICelera
Cytogenetic Map13q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sdccag8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 727781
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.