Akap11 (A-kinase anchoring protein 11) - Rat Genome Database

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Gene: Akap11 (A-kinase anchoring protein 11) Rattus rattus
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Symbol: Akap11
Name: A-kinase anchoring protein 11
RGD ID: 625850037
Description: ENCODES a protein that exhibits kinase regulator activity (ortholog); protein kinase A catalytic subunit binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); intracellular protein localization (ortholog); positive regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog); protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: A-kinase anchor protein 11
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Rrattus_CSIRO_v1 - Rrattus_CSIRO_v1 Assembly
Position:
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11245,761,415 - 45,804,472 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Akap11
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11245,761,415 - 45,804,472 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1
AKAP11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381342,271,477 - 42,323,261 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1342,271,470 - 42,323,283 (+)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh371342,846,288 - 42,897,397 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361341,744,289 - 41,795,402 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341341,744,288 - 41,782,992NCBI
Celera1323,903,720 - 23,954,839 (+)NCBICelera
Cytogenetic Map13q14.11NCBI
HuRef1323,649,570 - 23,700,689 (+)NCBIHuRef
CHM1_11342,813,753 - 42,864,863 (+)NCBICHM1_1
T2T-CHM13v2.01341,491,099 - 41,543,005 (+)NCBIT2T-CHM13v2.0
Akap11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391478,729,686 - 78,774,306 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1478,729,683 - 78,774,300 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381478,492,246 - 78,536,980 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1478,492,246 - 78,536,808 (-)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv371478,892,053 - 78,936,667 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361477,226,401 - 77,253,274 (-)NCBIMGSCv36mm8
Celera1476,008,096 - 76,052,775 (-)NCBICelera
Cytogenetic Map14D3NCBI
cM Map1441.46NCBI
Akap11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81560,320,839 - 60,365,480 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1560,320,839 - 60,365,335 (-)EnsemblGRCr8
mRatBN7.21553,911,635 - 53,956,138 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1553,911,657 - 53,941,605 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1558,044,930 - 58,089,415 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01559,163,315 - 59,207,800 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01555,988,186 - 56,032,676 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1559,595,866 - 59,640,362 (-)NCBI
Lyon_Normotensive1558,644,955 - 58,689,434 (-)NCBI
Lyon_Hypertensive1559,480,395 - 59,524,889 (-)NCBI
F344_StmMcwi1557,466,362 - 57,510,853 (-)NCBI
Rnor_6.01560,722,138 - 60,766,673 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1560,722,160 - 60,766,579 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.01564,390,111 - 64,434,755 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41559,649,461 - 59,679,551 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1553,502,729 - 53,532,469 (-)NCBICelera
RGSC_v3.11559,667,851 - 59,686,848 (-)NCBI
Cytogenetic Map15q11NCBI
Akap11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555184,032,448 - 4,083,697 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049555184,032,738 - 4,083,720 (-)NCBIChiLan1.0ChiLan1.0
AKAP11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21441,765,525 - 41,820,436 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11332,869,144 - 32,924,088 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01323,453,478 - 23,505,317 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
AKAP11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1228,462,058 - 8,509,660 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl228,465,797 - 8,509,955 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha228,454,180 - 8,502,984 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0228,684,334 - 8,733,152 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl228,687,219 - 8,732,517 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1228,378,640 - 8,427,434 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0228,429,251 - 8,478,037 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0228,440,950 - 8,489,748 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Akap11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap16156,397,930 - 156,445,271 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_024404945152,547,325 - 152,594,570 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367471,482,114 - 1,526,485 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049367471,479,241 - 1,526,915 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKAP11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1124,702,154 - 24,752,084 (-)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.11124,702,157 - 24,752,410 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21125,404,617 - 25,429,539 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AKAP11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1320,643,355 - 20,694,499 (+)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366605723,710,925 - 23,762,673 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1320,447,394 - 20,498,604 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl320,462,176 - 20,494,670 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Akap11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474812,769,698 - 12,820,815 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_00462474812,770,056 - 12,812,976 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl1132,360,537 - 32,394,565 (-)Ensembl


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_032918185   ⟹   XP_032774076
Type: CODING
Position:
Black Rat AssemblyChrPosition (strand)Source
Rrattus_CSIRO_v11245,775,855 - 45,804,472 (+)NCBI
RefSeq Acc Id: XM_032918187   ⟹   XP_032774078
Type: CODING
Position:
Black Rat AssemblyChrPosition (strand)Source
Rrattus_CSIRO_v11245,761,415 - 45,804,472 (+)NCBI
Protein Sequences
Protein RefSeqs XP_032774076 (Get FASTA)   NCBI Sequence Viewer  
  XP_032774078 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_032774078   ⟸   XM_032918187
- Peptide Label: isoform X2
RefSeq Acc Id: XP_032774076   ⟸   XM_032918185
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
NCBI Gene Akap11 ENTREZGENE