Gene: Opn4 (opsin 4) Rattus norvegicus
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Symbol: Opn4
Name: opsin 4
Description: ENCODES a protein that exhibits G-protein coupled photoreceptor activity; 11-cis retinal binding (ortholog); INVOLVED IN phototransduction; entrainment of circadian clock by photoperiod (ortholog); positive regulation of circadian sleep/wake cycle, sleep (ortholog); FOUND IN plasma membrane (ortholog); INTERACTS WITH ammonium chloride; bisphenol A; furan
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: melanopsin; opsin 4 (melanopsin); opsin-4
Orthologs:
Homo sapiens (human) : OPN4 (opsin 4)  HGNC  Alliance
Mus musculus (house mouse) : Opn4 (opsin 4 (melanopsin))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Opn4 (opsin 4)
Canis lupus familiaris (dog) : OPN4 (opsin 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Opn4 (opsin 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01610,943,353 - 10,966,602 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0169,268,356 - 9,277,528 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41610,249,756 - 10,258,923 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11610,249,757 - 10,258,921 (-)NCBI
Celera165,287,559 - 5,296,704 (+)NCBICelera
Cytogenetic Map16p15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Opn4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621701
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2018-05-29
Status: ACTIVE