LOC120094961 (U2 spliceosomal RNA) - Rat Genome Database

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Gene: LOC120094961 (U2 spliceosomal RNA) Rattus norvegicus
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Symbol: LOC120094961
Name: U2 spliceosomal RNA
RGD ID: 41019548
Description:
Type: pseudo (Ensembl: snRNA)
RefSeq Status: MODEL
Previously known as: U2
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8953,079,323 - 53,079,486 (-)NCBIGRCr8
mRatBN7.2945,587,224 - 45,587,387 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl945,587,224 - 45,587,387 (-)EnsemblmRatBN7.2 Ensembl
Cytogenetic Map9q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC120094961
1 total Variants

1 to 10 of 30 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)92375402458157242Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat

1 to 10 of 30 rows





GenBank Nucleotide JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000097522
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl945,587,224 - 45,587,387 (-)Ensembl

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-27668 BioCyc
Ensembl Genes ENSRNOG00000064914 Ensembl
NCBI Gene LOC120094961 ENTREZGENE
PhenoGen LOC120094961 PhenoGen
RatGTEx ENSRNOG00000064914 RatGTEx
RNAcentral URS000064DE90 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-27 LOC120094961  U2 spliceosomal RNA  U2  U2 spliceosomal RNA  Data merged from RGD:150345182 737654 PROVISIONAL
2021-08-31 U2  U2 spliceosomal RNA      Symbol and Name status set to provisional 45752 PROVISIONAL
2021-01-27 LOC120094961  U2 spliceosomal RNA      Symbol and Name status set to provisional 70820 PROVISIONAL