Apeh (Heterocephalus glaber - naked mole-rat) |
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APEH (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 49,673,117 - 49,683,971 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 49,674,014 - 49,683,971 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 49,711,784 - 49,721,404 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 49,686,439 - 49,695,938 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 49,686,438 - 49,695,937 | NCBI | | | | | Celera | 3 | 49,676,127 - 49,685,626 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p21.31 | NCBI | | | | | HuRef | 3 | 49,770,415 - 49,779,914 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 49,663,491 - 49,672,990 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 49,702,408 - 49,713,255 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Apeh (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 107,962,613 - 107,971,736 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 107,962,612 - 107,971,805 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 108,085,413 - 108,094,490 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 108,085,413 - 108,094,606 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 107,987,745 - 107,996,811 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 107,943,514 - 107,952,552 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 107,695,183 - 107,704,249 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | F1 | NCBI | | | | | cM Map | 9 | 59.07 | NCBI | | | | |
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Apeh (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 117,652,390 - 117,661,502 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 108,773,791 - 108,782,903 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 108,773,794 - 108,782,933 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 114,400,007 - 114,409,117 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 112,599,331 - 112,608,441 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 110,441,972 - 110,451,082 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 116,862,664 - 116,871,776 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 116,862,625 - 116,872,215 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 116,216,745 - 116,225,857 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 113,353,151 - 113,362,263 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 113,372,606 - 113,381,718 (-) | NCBI | | | | | Celera | 8 | 108,078,004 - 108,087,116 (-) | NCBI | | Celera | | | RH 3.4 Map | 8 | 1116.3 | RGD | | | | | Cytogenetic Map | 8 | q32 | NCBI | | | | |
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Apeh (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955532 | 1,580,553 - 1,590,138 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955532 | 1,580,473 - 1,590,274 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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APEH (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 49,659,511 - 49,670,341 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 49,665,230 - 49,675,114 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 49,606,294 - 49,615,896 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 50,843,968 - 50,853,516 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 50,843,220 - 50,853,516 (+) | Ensembl | panpan1.1 | | panPan2 | |
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APEH (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 39,587,316 - 39,596,324 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 39,587,279 - 39,596,228 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 39,508,241 - 39,517,291 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 39,944,841 - 39,953,890 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 39,944,843 - 39,953,810 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 39,311,923 - 39,320,973 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 39,715,279 - 39,724,328 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 39,995,110 - 40,004,158 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Apeh (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 64,529,248 - 64,538,312 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936529 | 1,289,827 - 1,298,798 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936529 | 1,289,810 - 1,298,798 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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APEH (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 32,205,609 - 32,214,518 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 32,205,863 - 32,214,517 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 35,385,067 - 35,393,717 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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APEH (Chlorocebus sabaeus - green monkey) |
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