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Gene: Iqce (IQ motif containing E) Heterocephalus glaber

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Symbol:

Iqce

Name:

IQ motif containing E

RGD ID:

18918091

Description:

INVOLVED IN limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to motile cilium (ortholog); ASSOCIATED WITH brachydactyly (ortholog); genetic disease (ortholog); immunodeficiency 11A (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

IQ domain-containing protein E

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	IQCE (IQ motif containing E)	NCBI	Ortholog
Mus musculus (house mouse):	Iqce (IQ motif containing E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Iqce (IQ motif containing E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Iqce (IQ motif containing E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	IQCE (IQ motif containing E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	IQCE (IQ motif containing E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Iqce (IQ motif containing E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	IQCE (IQ motif containing E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	IQCE (IQ motif containing E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624740	30,299,266 - 30,348,572 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Iqce	Naked Mole-Rat	brachydactyly		ISO	IQCE (Homo sapiens)	8554872	ClinVar Annotator: match by term: Brachydactyly	ClinVar	PMID:25741868 more ...
Iqce	Naked Mole-Rat	genetic disease		ISO	IQCE (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar
Iqce	Naked Mole-Rat	immunodeficiency 11A		ISO	IQCE (Homo sapiens)	8554872	ClinVar Annotator: match by term: Severe combined immunodeficiency due to CARD11 deficiency	ClinVar	PMID:23374270 more ...
Iqce	Naked Mole-Rat	Postaxial Polydactyly, Type A1		ISO	IQCE (Homo sapiens)	8554872	ClinVar Annotator: match by term: Polydactyly more ...	ClinVar	PMID:25741868 more ...
Iqce	Naked Mole-Rat	Postaxial Polydactyly, Type A7		ISO	IQCE (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 more ...
Iqce	Naked Mole-Rat	retinal degeneration		ISO	IQCE (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinal degeneration	ClinVar	PMID:25741868 more ...
Iqce	Naked Mole-Rat	syndactyly		ISO	IQCE (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndactyly	ClinVar	PMID:25741868 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Iqce	Naked Mole-Rat	Postaxial Polydactyly, Type A7		ISO	IQCE (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Iqce	Naked Mole-Rat	limb morphogenesis	involved_in	ISO	IQCE (Homo sapiens)	9068941	PMID:28488682	UniProt	PMID:28488682
Iqce	Naked Mole-Rat	positive regulation of transcription by RNA polymerase II	involved_in	ISO	Iqce (Mus musculus)	9068941	PMID:24582806	UniProt	PMID:24582806
Iqce	Naked Mole-Rat	protein localization to motile cilium	involved_in	ISO	Iqce (Mus musculus)	9068941	PMID:24582806	UniProt	PMID:24582806
Iqce	Naked Mole-Rat	regulation of smoothened signaling pathway	involved_in	ISO	Iqce (Mus musculus)	9068941	PMID:24582806	UniProt	PMID:24582806

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Iqce	Naked Mole-Rat	ciliary membrane	located_in	ISO	Iqce (Mus musculus)	9068941	PMID:24582806	UniProt	PMID:24582806
Iqce	Naked Mole-Rat	cytoplasmic side of plasma membrane	located_in	ISO	Iqce (Mus musculus)	9068941	PMID:24582806	UniProt	PMID:24582806
Iqce	Naked Mole-Rat	plasma membrane protein complex	part_of	ISO	Iqce (Mus musculus)	9068941	PMID:24582806	UniProt	PMID:24582806

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Iqce	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:Q6PF05	9068941	PMID:33961781	IntAct	PMID:33961781
Iqce	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:P52597 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Iqce	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:B4DJ51 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
Iqce	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:P57680 more ...	9068941	PMID:24582806	UniProt	PMID:24582806
Iqce	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:P25788 and UniProtKB:Q6PF05	9068941	PMID:24722188	IntAct	PMID:24722188

PMID:22301074

Iqce
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624740	30,299,266 - 30,348,572 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

IQCE
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	2,558,979 - 2,614,728 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	2,558,972 - 2,614,733 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	2,598,613 - 2,654,362 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	2,565,158 - 2,620,894 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	2,371,872 - 2,423,779	NCBI
Celera	7	2,567,993 - 2,623,218 (+)	NCBI		Celera
Cytogenetic Map	7	p22.3	NCBI
HuRef	7	2,517,599 - 2,572,724 (+)	NCBI		HuRef
CHM1_1	7	2,598,231 - 2,653,765 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	2,672,578 - 2,728,247 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	2,646,544 - 2,702,212 (+)	NCBI

Iqce
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	140,648,308 - 140,688,158 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	140,647,582 - 140,688,133 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	140,662,553 - 140,702,403 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	140,661,827 - 140,702,378 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	141,139,459 - 141,178,332 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	140,915,979 - 140,954,852 (-)	NCBI		MGSCv36	mm8
Celera	5	137,723,918 - 137,762,791 (-)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	79.2	NCBI

Iqce
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	19,057,060 - 19,096,626 (+)	NCBI		GRCr8
mRatBN7.2	12	13,943,290 - 13,982,708 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	13,943,487 - 13,982,693 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	12	16,030,607 - 16,069,872 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	15,857,805 - 16,067,924 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	18,028,202 - 18,067,110 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	14,414,172 - 14,451,362 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	14,442,250 - 14,468,742 (+)	NCBI
Celera	12	15,703,595 - 15,742,833 (+)	NCBI		Celera
Cytogenetic Map	12	q11	NCBI

Iqce
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955460	12,676,649 - 12,724,613 (+)	NCBI	ChiLan1.0	ChiLan1.0

IQCE
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	7,515,101 - 7,571,172 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	55,839,800 - 55,895,872 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	2,818,723 - 2,874,505 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	2,913,345 - 2,968,619 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	2,913,549 - 2,964,046 (+)	Ensembl	panpan1.1		panPan2

IQCE
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	14,538,693 - 14,579,095 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	14,532,181 - 14,577,435 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	15,995,640 - 16,041,843 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	14,659,001 - 14,705,205 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	6	14,462,989 - 14,509,190 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	14,391,420 - 14,437,616 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	14,677,263 - 14,723,464 (+)	NCBI		UU_Cfam_GSD_1.0

Iqce
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	142,661,793 - 142,711,886 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936823	340,959 - 389,593 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IQCE
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	1,861,204 - 1,903,035 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	1,861,487 - 1,903,107 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	2,124,748 - 2,168,376 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IQCE
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	18,963,871 - 19,014,509 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	18,963,944 - 19,019,009 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666090	2,752,561 - 2,807,874 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_004840416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013070615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013070616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021254704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021254705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002393356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002393357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AHKG01018625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_004840416 ⟹ XP_004840473

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	30,299,270 - 30,348,572 (+)	NCBI

RefSeq Acc Id:

XM_013070615 ⟹ XP_012926069

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	30,299,268 - 30,348,572 (+)	NCBI

RefSeq Acc Id:

XM_013070616 ⟹ XP_012926070

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	30,299,268 - 30,348,572 (+)	NCBI

RefSeq Acc Id:

XM_021254704 ⟹ XP_021110363

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	30,299,268 - 30,348,572 (+)	NCBI

RefSeq Acc Id:

XM_021254705 ⟹ XP_021110364

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	30,299,267 - 30,348,572 (+)	NCBI

RefSeq Acc Id:

XR_002393356

Type:

NON-CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	30,299,268 - 30,348,572 (+)	NCBI

RefSeq Acc Id:

XR_002393357

Type:

NON-CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	30,299,266 - 30,344,080 (+)	NCBI


Protein RefSeqs	XP_004840473	(Get FASTA)	NCBI Sequence Viewer
	XP_012926069	(Get FASTA)	NCBI Sequence Viewer
	XP_012926070	(Get FASTA)	NCBI Sequence Viewer
	XP_021110363	(Get FASTA)	NCBI Sequence Viewer
	XP_021110364	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_021110364 ⟸ XM_021254705
- Peptide Label:	isoform X5
- UniProtKB:	A0AAX6SNH9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_021110363 ⟸ XM_021254704
- Peptide Label:	isoform X4
- UniProtKB:	A0AAX6SPE4 (UniProtKB/TrEMBL), G5BF55 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_012926069 ⟸ XM_013070615
- Peptide Label:	isoform X1
- UniProtKB:	A0AAX6QT69 (UniProtKB/TrEMBL), G5BF55 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_012926070 ⟸ XM_013070616
- Peptide Label:	isoform X2
- UniProtKB:	A0AAX6QTR3 (UniProtKB/TrEMBL), G5BF55 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_004840473 ⟸ XM_004840416
- Peptide Label:	isoform X3
- UniProtKB:	A0AAX6NZF2 (UniProtKB/TrEMBL), G5BF55 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Gene3D-CATH	1.20.5.190	UniProtKB/TrEMBL
InterPro	CellDiv_DevSignal_Domain	UniProtKB/TrEMBL
	IQ_motif_EF-hand-BS	UniProtKB/TrEMBL
NCBI Gene	Iqce	ENTREZGENE
PANTHER	IQ DOMAIN-CONTAINING PROTEIN E	UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/TrEMBL
Pfam	PF00612	UniProtKB/TrEMBL
PROSITE	PS50096	UniProtKB/TrEMBL
UniProt	A0AAX6NZF2	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6QT69	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6QTR3	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6SNH9	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6SPE4	ENTREZGENE, UniProtKB/TrEMBL
	G5BF55	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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