Iqce (IQ motif containing E) - Rat Genome Database

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Gene: Iqce (IQ motif containing E) Chinchilla lanigera
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Symbol: Iqce
Name: IQ motif containing E
RGD ID: 8713405
Description: INVOLVED IN limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH brachydactyly (ortholog); genetic disease (ortholog); immunodeficiency 11A (ortholog); FOUND IN ciliary membrane (ortholog); extrinsic component of membrane (ortholog); plasma membrane protein complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: IQ domain-containing protein E; IQ domain-containing protein E-like; LOC102012931
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495546012,676,649 - 12,724,613 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Iqce
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495546012,676,649 - 12,724,613 (+)NCBIChiLan1.0ChiLan1.0
IQCE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl72,558,972 - 2,614,733 (+)EnsemblGRCh38hg38GRCh38
GRCh3872,558,978 - 2,614,729 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3772,598,613 - 2,654,362 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3672,565,158 - 2,620,894 (+)NCBINCBI36hg18NCBI36
Build 3472,371,872 - 2,423,779NCBI
Celera72,567,993 - 2,623,218 (+)NCBI
Cytogenetic Map7p22.3NCBI
HuRef72,517,599 - 2,572,724 (+)NCBIHuRef
CHM1_172,598,231 - 2,653,765 (+)NCBICHM1_1
CRA_TCAGchr7v272,646,544 - 2,702,212 (+)NCBI
Iqce
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395140,648,308 - 140,688,158 (-)NCBIGRCm39mm39
GRCm39 Ensembl5140,647,582 - 140,688,133 (-)Ensembl
GRCm385140,662,553 - 140,702,403 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5140,661,827 - 140,702,378 (-)EnsemblGRCm38mm10GRCm38
MGSCv375141,139,459 - 141,178,332 (-)NCBIGRCm37mm9NCBIm37
MGSCv365140,915,979 - 140,954,852 (-)NCBImm8
Celera5137,723,918 - 137,762,791 (-)NCBICelera
Cytogenetic Map5G2NCBI
Iqce
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21213,943,290 - 13,982,708 (+)NCBI
Rnor_6.0 Ensembl1215,857,805 - 16,067,924 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01216,030,607 - 16,069,872 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01218,028,202 - 18,067,110 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41214,414,172 - 14,451,362 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11214,442,250 - 14,468,742 (+)NCBI
Celera1215,703,595 - 15,742,833 (+)NCBICelera
Cytogenetic Map12q11NCBI
IQCE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.172,913,345 - 2,968,619 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl72,913,549 - 2,964,046 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v072,818,723 - 2,874,505 (+)NCBIMhudiblu_PPA_v0panPan3
IQCE
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1614,538,693 - 14,579,095 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl614,532,181 - 14,577,435 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha615,995,640 - 16,041,843 (+)NCBI
ROS_Cfam_1.0614,659,001 - 14,705,205 (+)NCBI
UMICH_Zoey_3.1614,462,989 - 14,509,190 (+)NCBI
UNSW_CanFamBas_1.0614,391,420 - 14,437,616 (+)NCBI
UU_Cfam_GSD_1.0614,677,263 - 14,723,464 (+)NCBI
Iqce
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344142,661,793 - 142,711,886 (+)NCBI
SpeTri2.0NW_004936823340,959 - 389,593 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IQCE
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl31,861,200 - 1,903,036 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.131,861,487 - 1,903,107 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.232,124,748 - 2,168,376 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IQCE
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12818,963,871 - 19,014,509 (+)NCBI
ChlSab1.1 Ensembl2818,963,944 - 19,019,009 (+)Ensembl
Vero_WHO_p1.0NW_0236660902,752,561 - 2,807,874 (-)NCBI
Iqce
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474030,299,266 - 30,348,572 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013521153   ⟹   XP_013376607
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495546012,676,649 - 12,724,613 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013376607 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013376607   ⟸   XM_013521153
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008881 ENTREZGENE
Ensembl Protein ENSCLAP00000012862 ENTREZGENE
Ensembl Transcript ENSCLAT00000013010 ENTREZGENE
NCBI Gene Iqce ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-11-21 Iqce  IQ motif containing E  LOC102012931  IQ domain-containing protein E-like  Data Merged 737654 PROVISIONAL