Iqce (IQ motif containing E) - Rat Genome Database

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Gene: Iqce (IQ motif containing E) Mus musculus
Analyze
Symbol: Iqce
Name: IQ motif containing E
RGD ID: 1551794
MGI Page MGI
Description: Involved in positive regulation of transcription by RNA polymerase II. Located in ciliary membrane. Is extrinsic component of membrane. Part of plasma membrane protein complex. Orthologous to human IQCE (IQ motif containing E); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1700028P05Rik; IQ domain-containing protein E; mKIAA1023
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395140,648,308 - 140,688,158 (-)NCBIGRCm39mm39
GRCm39 Ensembl5140,647,582 - 140,688,133 (-)Ensembl
GRCm385140,662,553 - 140,702,403 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5140,661,827 - 140,702,378 (-)EnsemblGRCm38mm10GRCm38
MGSCv375141,139,459 - 141,178,332 (-)NCBIGRCm37mm9NCBIm37
MGSCv365140,915,979 - 140,954,852 (-)NCBImm8
Celera5137,723,918 - 137,762,791 (-)NCBICelera
Cytogenetic Map5G2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18614015   PMID:18799693   PMID:24582806   PMID:27626380  
PMID:29459677   PMID:32325033  


Genomics

Comparative Map Data
Iqce
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395140,648,308 - 140,688,158 (-)NCBIGRCm39mm39
GRCm39 Ensembl5140,647,582 - 140,688,133 (-)Ensembl
GRCm385140,662,553 - 140,702,403 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5140,661,827 - 140,702,378 (-)EnsemblGRCm38mm10GRCm38
MGSCv375141,139,459 - 141,178,332 (-)NCBIGRCm37mm9NCBIm37
MGSCv365140,915,979 - 140,954,852 (-)NCBImm8
Celera5137,723,918 - 137,762,791 (-)NCBICelera
Cytogenetic Map5G2NCBI
IQCE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl72,558,972 - 2,614,733 (+)EnsemblGRCh38hg38GRCh38
GRCh3872,558,978 - 2,614,729 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3772,598,613 - 2,654,362 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3672,565,158 - 2,620,894 (+)NCBINCBI36hg18NCBI36
Build 3472,371,872 - 2,423,779NCBI
Celera72,567,993 - 2,623,218 (+)NCBI
Cytogenetic Map7p22.3NCBI
HuRef72,517,599 - 2,572,724 (+)NCBIHuRef
CHM1_172,598,231 - 2,653,765 (+)NCBICHM1_1
CRA_TCAGchr7v272,646,544 - 2,702,212 (+)NCBI
Iqce
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21213,943,290 - 13,982,708 (+)NCBI
Rnor_6.0 Ensembl1215,857,805 - 16,067,924 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01216,030,607 - 16,069,872 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01218,028,202 - 18,067,110 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41214,414,172 - 14,451,362 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11214,442,250 - 14,468,742 (+)NCBI
Celera1215,703,595 - 15,742,833 (+)NCBICelera
Cytogenetic Map12q11NCBI
Iqce
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495546012,676,649 - 12,724,613 (+)NCBIChiLan1.0ChiLan1.0
IQCE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.172,913,345 - 2,968,619 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl72,913,549 - 2,964,046 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v072,818,723 - 2,874,505 (+)NCBIMhudiblu_PPA_v0panPan3
IQCE
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1614,538,693 - 14,579,095 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl614,532,181 - 14,577,435 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha615,995,640 - 16,041,843 (+)NCBI
ROS_Cfam_1.0614,659,001 - 14,705,205 (+)NCBI
UMICH_Zoey_3.1614,462,989 - 14,509,190 (+)NCBI
UNSW_CanFamBas_1.0614,391,420 - 14,437,616 (+)NCBI
UU_Cfam_GSD_1.0614,677,263 - 14,723,464 (+)NCBI
Iqce
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344142,661,793 - 142,711,886 (+)NCBI
SpeTri2.0NW_004936823340,959 - 389,593 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IQCE
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl31,861,200 - 1,903,036 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.131,861,487 - 1,903,107 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.232,124,748 - 2,168,376 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IQCE
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12818,963,871 - 19,014,509 (+)NCBI
ChlSab1.1 Ensembl2818,963,944 - 19,019,009 (+)Ensembl
Vero_WHO_p1.0NW_0236660902,752,561 - 2,807,874 (-)NCBI
Iqce
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474030,299,266 - 30,348,572 (+)NCBI

Position Markers
D5Mit292  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385140,687,038 - 140,687,148UniSTSGRCm38
MGSCv375141,162,992 - 141,163,102UniSTSGRCm37
Celera5137,747,451 - 137,747,561UniSTS
Cytogenetic Map5G1UniSTS
cM Map580.0UniSTS
Whitehead Genetic573.2UniSTS
Whitehead/MRC_RH51689.25UniSTS
Whitehead_YAC5 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301715Elmaz2_melevated maze behavior 2 (mouse)Not determined5125101165141714711Mouse
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118920110151834684Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121556974151834684Mouse
1302079Lbw3_mlupus NZB x NZW 3 (mouse)Not determined5124714580151834684Mouse
4141081Nidd7k_mNidd7 on KK-A (mouse)Not determined119806972149423861Mouse
4141218Ath24_matherosclerosis 24 (mouse)Not determined129583274151834684Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589271017146851125Mouse
1301363Pbwg13_mpostnatal body weight growth 13 (mouse)Not determined5125147702151834684Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109362284143362395Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115128044149128176Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115128044149128176Mouse
10043890Trigq4_mtriglyceride QTL 4 (mouse)Not determined5107829235141829348Mouse
10412191Bbaa24_mB.burgdorferi-associated arthritis 24 (mouse)Not determined5119806972141714711Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109090176143090317Mouse
4142473Chlq11_mcirculating hormone level QTL 11 (mouse)Not determined5107829235141829348Mouse
11049557Lmr26_mleishmaniasis resistance 26 (mouse)5134002093151834684Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121457140151834684Mouse
12880406Jcdq2_mjoint cartilage degeneration QTL 2 (mouse)5129851021151834684Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109090176143090317Mouse
13464243Ahl20_mage related hearing loss, early onset 20 (mouse)5107829235141829348Mouse
13504734Ifvrq4_minfluenza virus resistance QTL 4 (mouse)5140000000153000000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3926
Count of miRNA genes:884
Interacting mature miRNAs:1227
Transcripts:ENSMUST00000041783, ENSMUST00000077890, ENSMUST00000123683, ENSMUST00000124005, ENSMUST00000129704, ENSMUST00000135028, ENSMUST00000136385, ENSMUST00000139382, ENSMUST00000142081, ENSMUST00000147839, ENSMUST00000148788, ENSMUST00000149674
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001347517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_028833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC110253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC042766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000041783   ⟹   ENSMUSP00000045913
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,661,827 - 140,702,378 (-)Ensembl
RefSeq Acc Id: ENSMUST00000077890   ⟹   ENSMUSP00000077050
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,665,280 - 140,702,339 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123683
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,689,975 - 140,701,969 (-)Ensembl
RefSeq Acc Id: ENSMUST00000124005
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,683,030 - 140,689,978 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129704   ⟹   ENSMUSP00000121457
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,666,029 - 140,683,495 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135028   ⟹   ENSMUSP00000143397
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,692,881 - 140,702,300 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136385
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,663,505 - 140,702,265 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139382
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,693,279 - 140,702,294 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142081   ⟹   ENSMUSP00000120637
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,689,980 - 140,702,378 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147839
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,663,505 - 140,666,241 (-)Ensembl
RefSeq Acc Id: ENSMUST00000148788
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,666,158 - 140,669,359 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149674
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl5140,683,810 - 140,702,276 (-)Ensembl
RefSeq Acc Id: NM_001347517   ⟹   NP_001334446
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,649,260 - 140,688,133 (-)NCBI
GRCm385140,663,505 - 140,702,378 (-)NCBI
Sequence:
RefSeq Acc Id: NM_028833   ⟹   NP_083109
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,649,260 - 140,688,133 (-)NCBI
GRCm385140,663,505 - 140,702,378 (-)NCBI
MGSCv375141,139,459 - 141,178,332 (-)RGD
Celera5137,723,918 - 137,762,791 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006504739   ⟹   XP_006504802
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,123 (-)NCBI
GRCm385140,662,553 - 140,702,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504740   ⟹   XP_006504803
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,123 (-)NCBI
GRCm385140,662,553 - 140,702,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504741   ⟹   XP_006504804
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,123 (-)NCBI
GRCm385140,662,553 - 140,702,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504742   ⟹   XP_006504805
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,158 (-)NCBI
GRCm385140,662,553 - 140,702,403 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504744   ⟹   XP_006504807
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,123 (-)NCBI
GRCm385140,662,553 - 140,702,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504745   ⟹   XP_006504808
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,123 (-)NCBI
GRCm385140,662,553 - 140,702,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504746   ⟹   XP_006504809
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,122 (-)NCBI
GRCm385140,662,553 - 140,702,367 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504748   ⟹   XP_006504811
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,672,155 (-)NCBI
GRCm385140,662,553 - 140,686,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254852   ⟹   XP_030110712
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,687,943 (-)NCBI
GRCm385140,662,553 - 140,702,188 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254853   ⟹   XP_030110713
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,158 (-)NCBI
GRCm385140,662,553 - 140,702,403 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254854   ⟹   XP_030110714
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,687,943 (-)NCBI
GRCm385140,662,553 - 140,702,188 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254855   ⟹   XP_030110715
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,687,943 (-)NCBI
GRCm385140,662,553 - 140,702,188 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254856   ⟹   XP_030110716
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,687,943 (-)NCBI
GRCm385140,662,553 - 140,702,188 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254857   ⟹   XP_030110717
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,122 (-)NCBI
GRCm385140,662,553 - 140,702,367 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254858   ⟹   XP_030110718
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,121 (-)NCBI
GRCm385140,662,553 - 140,702,366 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254859   ⟹   XP_030110719
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,122 (-)NCBI
GRCm385140,662,553 - 140,702,366 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165558   ⟹   XP_036021451
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,122 (-)NCBI
RefSeq Acc Id: XM_036165559   ⟹   XP_036021452
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,688,123 (-)NCBI
RefSeq Acc Id: XM_036165560   ⟹   XP_036021453
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,679,298 (-)NCBI
RefSeq Acc Id: XM_036165562   ⟹   XP_036021455
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395140,648,308 - 140,687,916 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001334446 (Get FASTA)   NCBI Sequence Viewer  
  NP_083109 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504802 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504803 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504804 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504805 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504807 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504808 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504809 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504811 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110712 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110713 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110714 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110715 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110716 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110717 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110718 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110719 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021451 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021452 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021453 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021455 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH59223 (Get FASTA)   NCBI Sequence Viewer  
  BAB24605 (Get FASTA)   NCBI Sequence Viewer  
  BAC26400 (Get FASTA)   NCBI Sequence Viewer  
  EDL19111 (Get FASTA)   NCBI Sequence Viewer  
  EDL19112 (Get FASTA)   NCBI Sequence Viewer  
  EDL19113 (Get FASTA)   NCBI Sequence Viewer  
  Q6PCQ0 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_083109   ⟸   NM_028833
- Peptide Label: isoform 1
- UniProtKB: Q6PCQ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006504808   ⟸   XM_006504745
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_006504805   ⟸   XM_006504742
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006504807   ⟸   XM_006504744
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006504803   ⟸   XM_006504740
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006504802   ⟸   XM_006504739
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006504804   ⟸   XM_006504741
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006504809   ⟸   XM_006504746
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_006504811   ⟸   XM_006504748
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_030110713   ⟸   XM_030254853
- Peptide Label: isoform X7
RefSeq Acc Id: XP_030110717   ⟸   XM_030254857
- Peptide Label: isoform X14
RefSeq Acc Id: XP_030110718   ⟸   XM_030254858
- Peptide Label: isoform X16
RefSeq Acc Id: XP_030110719   ⟸   XM_030254859
- Peptide Label: isoform X18
RefSeq Acc Id: XP_030110716   ⟸   XM_030254856
- Peptide Label: isoform X13
RefSeq Acc Id: XP_030110715   ⟸   XM_030254855
- Peptide Label: isoform X12
RefSeq Acc Id: XP_030110714   ⟸   XM_030254854
- Peptide Label: isoform X11
RefSeq Acc Id: XP_030110712   ⟸   XM_030254852
- Peptide Label: isoform X6
RefSeq Acc Id: NP_001334446   ⟸   NM_001347517
- Peptide Label: isoform 2
- UniProtKB: Q6PCQ0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000143397   ⟸   ENSMUST00000135028
RefSeq Acc Id: ENSMUSP00000121457   ⟸   ENSMUST00000129704
RefSeq Acc Id: ENSMUSP00000045913   ⟸   ENSMUST00000041783
RefSeq Acc Id: ENSMUSP00000120637   ⟸   ENSMUST00000142081
RefSeq Acc Id: ENSMUSP00000077050   ⟸   ENSMUST00000077890
RefSeq Acc Id: XP_036021452   ⟸   XM_036165559
- Peptide Label: isoform X10
RefSeq Acc Id: XP_036021451   ⟸   XM_036165558
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036021455   ⟸   XM_036165562
- Peptide Label: isoform X16
RefSeq Acc Id: XP_036021453   ⟸   XM_036165560
- Peptide Label: isoform X15
Protein Domains
IQ

Promoters
RGD ID:6888608
Promoter ID:EPDNEW_M7755
Type:initiation region
Name:Iqce_1
Description:Mus musculus IQ motif containing E , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385140,702,305 - 140,702,365EPDNEW
RGD ID:6837739
Promoter ID:MM_KWN:44663
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:OTTMUST00000071281
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365141,141,684 - 141,142,184 (-)MPROMDB
RGD ID:6837741
Promoter ID:MM_KWN:44664
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000071288
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365141,144,981 - 141,145,481 (-)MPROMDB
RGD ID:6837742
Promoter ID:MM_KWN:44667
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000077890,   OTTMUST00000071277,   OTTMUST00000071279,   OTTMUST00000071282,   OTTMUST00000071283,   OTTMUST00000071284,   OTTMUST00000071285,   UC009AHZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365141,178,004 - 141,178,504 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1921489 AgrOrtholog
Ensembl Genes ENSMUSG00000036555 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000045913 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000077050 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000120637 UniProtKB/TrEMBL
  ENSMUSP00000121457 UniProtKB/TrEMBL
  ENSMUSP00000143397 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000041783 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000077890 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000129704 UniProtKB/TrEMBL
  ENSMUST00000135028 UniProtKB/TrEMBL
  ENSMUST00000142081 UniProtKB/TrEMBL
InterPro IQ_motif_EF-hand-BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:74239 UniProtKB/Swiss-Prot
MGD MGI:1921489 ENTREZGENE
NCBI Gene 74239 ENTREZGENE
Pfam PF00612 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Iqce PhenoGen
PROSITE PS50096 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SM00015 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JG25_MOUSE UniProtKB/TrEMBL
  D3YXD4_MOUSE UniProtKB/TrEMBL
  F6R782_MOUSE UniProtKB/TrEMBL
  IQCE_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q8CDZ1 UniProtKB/Swiss-Prot
  Q9D9U3 UniProtKB/Swiss-Prot