Symbol:
Pgm1
Name:
phosphoglucomutase 1
RGD ID:
18911577
Description:
ENCODES a protein that exhibits intramolecular phosphotransferase activity (inferred); isomerase activity (inferred); magnesium ion binding (inferred); INVOLVED IN cellular response to magnetism (ortholog); galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; fructose-1,6-bisphosphatase deficiency pathway; galactokinase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN Z disc (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
phosphoglucomutase-1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Pgm1 Naked Mole-Rat congenital disorder of glycosylation ISO RGD:734179 8554872 ClinVar Annotator: match by term: Congenital disorder of glycosylation | ClinVar Annotator: match by term: more ... ClinVar PMID:25741868|PMID:28492532|PMID:33342467 Pgm1 Naked Mole-Rat congenital disorder of glycosylation It ISO RGD:734179 8554872 ClinVar Annotator: match by term: Congenital disorder of glycosylation type 1t | ClinVar Annotator: match more ... ClinVar PMID:16199547|PMID:17576681|PMID:19625727|PMID:22492991|PMID:22976764|PMID:24499211|PMID:25288802|PMID:25741868|PMID:26768186|PMID:27206562|PMID:28117557|PMID:28492532|PMID:28617415|PMID:28820871|PMID:29858906|PMID:30122451|PMID:33342467|PMID:33413482|PMID:33473337|PMID:34782754|PMID:9536098 Pgm1 Naked Mole-Rat Craniosynostosis Syndrome, Autosomal Recessive ISO RGD:734179 8554872 ClinVar Annotator: match by term: Craniosynostosis syndrome ClinVar PMID:25741868 Pgm1 Naked Mole-Rat genetic disease ISO RGD:734179 8554872 ClinVar Annotator: match by term: Inborn genetic diseases ClinVar PMID:24499211|PMID:25741868|PMID:28117557|PMID:28492532|PMID:30122451 Pgm1 Naked Mole-Rat intellectual disability ISO RGD:734179 8554872 ClinVar Annotator: match by term: Intellectual disability, severe ClinVar PMID:25741868
Imported Annotations - SMPDB
Imported Annotations - PID (archival)
Pgm1
PGM1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 63,593,411 - 63,660,245 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 63,593,411 - 63,660,245 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 64,059,082 - 64,125,916 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 63,831,535 - 63,898,504 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 63,770,967 - 63,837,935 NCBI Celera 1 62,348,856 - 62,415,793 (+) NCBI Celera Cytogenetic Map 1 p31.3 NCBI HuRef 1 62,166,918 - 62,233,884 (+) NCBI HuRef CHM1_1 1 64,174,737 - 64,241,622 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 63,469,205 - 63,536,042 (+) NCBI T2T-CHM13v2.0
Pgm1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 99,786,648 - 99,844,491 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 99,786,611 - 99,844,491 (+) Ensembl GRCm39 Ensembl GRCm38 4 99,929,451 - 99,987,294 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 99,929,414 - 99,987,294 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 99,602,056 - 99,659,899 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 99,427,439 - 99,485,223 (+) NCBI MGSCv36 mm8 Celera 4 98,273,961 - 98,332,209 (+) NCBI Celera Cytogenetic Map 4 C6 NCBI cM Map 4 45.71 NCBI
Pgm1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 119,710,734 - 119,770,159 (+) NCBI GRCr8 mRatBN7.2 5 114,595,298 - 114,654,728 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 114,595,293 - 114,654,728 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 117,151,682 - 117,211,109 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 118,877,005 - 118,936,428 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 118,939,539 - 118,998,971 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 118,743,632 - 118,803,055 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 118,743,632 - 118,803,055 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 122,648,579 - 122,708,212 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 120,595,650 - 120,655,915 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 5 113,142,712 - 113,202,105 (+) NCBI Celera RH 3.4 Map 5 RGD Cytogenetic Map 5 q33 NCBI
Pgm1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955423 26,408,595 - 26,437,527 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955423 26,408,775 - 26,437,527 (-) NCBI ChiLan1.0 ChiLan1.0
PGM1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 163,193,482 - 163,262,694 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 162,344,100 - 162,411,352 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 62,849,451 - 62,916,359 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 64,658,599 - 64,725,496 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 64,658,599 - 64,725,496 (+) Ensembl panpan1.1 panPan2
PGM1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 46,444,433 - 46,577,621 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 46,515,295 - 46,577,622 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 46,505,433 - 46,638,431 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 46,624,512 - 46,757,954 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 46,672,266 - 46,757,997 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 46,586,542 - 46,719,720 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 46,532,568 - 46,666,112 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 46,790,338 - 46,923,562 (-) NCBI UU_Cfam_GSD_1.0
Pgm1 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405058 76,845,424 - 76,905,846 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936692 1,160,623 - 1,221,746 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936692 1,160,836 - 1,221,270 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
PGM1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 148,851,183 - 148,994,952 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 6 148,851,183 - 148,918,891 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 137,171,270 - 137,233,581 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
PGM1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 69,391,487 - 69,495,156 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 69,428,996 - 69,466,191 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666033 47,968,869 - 48,035,370 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSHGLT00000024873 ⟹ ENSHGLP00000024651
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla_female_1.0 Ensembl NW_004624742 30,542,448 - 30,592,162 (-) Ensembl
RefSeq Acc Id:
XM_004841523 ⟹ XP_004841580
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624742 30,543,161 - 30,592,117 (-) NCBI
RefSeq Acc Id:
XP_004841580 ⟸ XM_004841523
- UniProtKB:
A0AAX6P1F4 (UniProtKB/TrEMBL), A0A0N8EUL9 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSHGLP00000024651 ⟸ ENSHGLT00000024873
