Gsta4 (glutathione S-transferase alpha 4) - Rat Genome Database

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Gene: Gsta4 (glutathione S-transferase alpha 4) Heterocephalus glaber
Analyze
Symbol: Gsta4
Name: glutathione S-transferase alpha 4
RGD ID: 18909530
Description: ENCODES a protein that exhibits glutathione transferase activity (ortholog); identical protein binding (ortholog); organic cyclic compound binding (ortholog); INVOLVED IN cellular response to lithium ion (ortholog); glutathione metabolic process (ortholog); response to herbicide (ortholog); PARTICIPATES IN glutathione conjugation pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Burns (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: glutathione S-transferase A4
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624850201,592 - 216,680 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624850201,119 - 217,302 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gsta4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624850201,592 - 216,680 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624850201,119 - 217,302 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
GSTA4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38652,977,953 - 52,995,284 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl652,977,948 - 52,995,304 (-)EnsemblGRCh38hg38GRCh38
GRCh37652,842,751 - 52,860,082 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36652,950,710 - 52,968,099 (-)NCBINCBI36Build 36hg18NCBI36
Build 34652,950,709 - 52,968,099NCBI
Celera654,504,520 - 54,521,952 (-)NCBICelera
Cytogenetic Map6p12.2NCBI
HuRef652,674,221 - 52,691,656 (-)NCBIHuRef
CHM1_1652,844,511 - 52,861,941 (-)NCBICHM1_1
T2T-CHM13v2.0652,817,518 - 52,834,853 (-)NCBIT2T-CHM13v2.0
Gsta4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8887,947,247 - 87,964,490 (+)NCBIGRCr8
mRatBN7.2879,066,967 - 79,084,193 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl879,066,934 - 79,084,182 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx884,554,453 - 84,571,445 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0882,831,109 - 82,848,101 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0880,653,832 - 80,670,824 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0885,497,557 - 85,514,732 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl885,497,557 - 85,518,879 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0885,062,036 - 85,078,502 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4883,165,139 - 83,183,055NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera878,811,797 - 78,829,038 (+)NCBICelera
Cytogenetic Map8q31NCBI
GSTA4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2567,449,101 - 67,466,562 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1663,325,479 - 63,342,938 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0652,532,942 - 52,550,404 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1654,171,609 - 54,189,032 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl654,171,318 - 54,188,976 (-)Ensemblpanpan1.1panPan2
GSTA4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11220,426,724 - 20,443,200 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1220,426,726 - 20,443,200 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1220,321,558 - 20,337,691 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01220,924,034 - 20,940,269 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1220,923,735 - 20,940,277 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11220,429,613 - 20,445,821 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01220,534,140 - 20,550,406 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01220,672,284 - 20,688,436 (-)NCBIUU_Cfam_GSD_1.0
LOC101958062
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494656,071,901 - 56,087,021 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364767,873,194 - 7,889,048 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364767,873,218 - 7,888,301 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GSTA4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl746,635,902 - 46,656,450 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1746,635,903 - 46,656,491 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27134,379,987 - 134,400,475 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GSTA4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11719,575,835 - 19,591,713 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1719,575,876 - 19,591,919 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604452,829,812 - 52,845,691 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021247627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01089568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSHGLT00000002608   ⟹   ENSHGLP00000002556
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624850201,592 - 216,680 (-)Ensembl
RefSeq Acc Id: XM_021247627   ⟹   XP_021103286
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624850201,119 - 217,302 (-)NCBI
Protein Sequences
Protein RefSeqs XP_021103286 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000002556
RefSeq Acc Id: XP_021103286   ⟸   XM_021247627
Ensembl Acc Id: ENSHGLP00000002556   ⟸   ENSHGLT00000002608


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000001927 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000002608 ENTREZGENE
NCBI Gene Gsta4 ENTREZGENE