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Gene: RBM42 (RNA binding motif protein 42) Chlorocebus sabaeus

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Symbol:

RBM42

Name:

RNA binding motif protein 42

RGD ID:

18784965

Description:

ENCODES a protein that exhibits mRNA binding (inferred); nucleic acid binding (inferred); RNA binding (inferred); INVOLVED IN negative regulation of mRNA splicing, via spliceosome (inferred); ASSOCIATED WITH Brugada syndrome 5 (ortholog); dystonia (ortholog); hereditary spastic paraplegia 75 (ortholog); FOUND IN U4/U6 x U5 tri-snRNP complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

RNA-binding protein 42

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	30,539,718 - 30,548,412 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	30,539,721 - 30,548,414 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	8,335,012 - 8,343,699 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBM42	Green Monkey	Brugada syndrome 5		ISO	RGD:1601847	8554872	ClinVar Annotator: match by term: Brugada syndrome 5	ClinVar	PMID:28492532
RBM42	Green Monkey	dystonia		ISO	RGD:1601847	8554872	ClinVar Annotator: match by term: Dystonic disorder	ClinVar	PMID:32581362
RBM42	Green Monkey	hereditary spastic paraplegia 75		ISO	RGD:1601847	8554872	ClinVar Annotator: match by term: Hereditary spastic paraplegia 75	ClinVar	PMID:28492532

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBM42	Green Monkey	negative regulation of mRNA splicing, via spliceosome	acts_upstream_of_or_within	IEA	UniProtKB:Q91V81\|ensembl:ENSMUSP00000040005	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBM42	Green Monkey	U4/U6 x U5 tri-snRNP complex	part_of	IEA	UniProtKB:Q9BTD8\|ensembl:ENSP00000262633	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBM42	Green Monkey	mRNA binding	enables	IEA	InterPro:IPR050825	150520179		InterPro	GO_REF:0000002
RBM42	Green Monkey	mRNA binding	enables	IEA	PANTHER:PTN000611828	150520179		TreeGrafter	GO_REF:0000118
RBM42	Green Monkey	nucleic acid binding	enables	IEA	InterPro:IPR035979	150520179		InterPro	GO_REF:0000002
RBM42	Green Monkey	protein binding	enables	ISO	UniProtKB:P25788\|UniProtKB:P61978	9068941	PMID:35271311	IntAct	PMID:35271311
RBM42	Green Monkey	protein binding	enables	ISO	UniProtKB:P61978	9068941	PMID:16189514, PMID:22365833, PMID:29892012	IntAct	PMID:16189514\|PMID:22365833\|PMID:29892012
RBM42	Green Monkey	protein binding	enables	ISO	UniProtKB:P25788	9068941	PMID:25416956	IntAct	PMID:25416956
RBM42	Green Monkey	protein binding	enables	ISO	UniProtKB:P86480\|UniProtKB:Q6ZRY4	9068941	PMID:32296183	IntAct	PMID:32296183
RBM42	Green Monkey	RNA binding	enables	IEA	InterPro:IPR000504	150520179		InterPro	GO_REF:0000002
RBM42	Green Monkey	RNA binding	enables	IEA	UniRule:UR000414619	150520179		UniProt	GO_REF:0000104
RBM42	Green Monkey	RNA binding	enables	IEA	UniProtKB-KW:KW-0694	150520179		UniProt	GO_REF:0000043

PMID:30032202

RBM42
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	30,539,718 - 30,548,412 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	30,539,721 - 30,548,414 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	8,335,012 - 8,343,699 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

RBM42
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	35,629,036 - 35,637,685 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	35,629,030 - 35,637,686 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	36,119,938 - 36,128,587 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	40,811,820 - 40,820,427 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	32,833,444 - 32,842,052 (+)	NCBI		Celera
Cytogenetic Map	19	q13.12	NCBI
HuRef	19	32,625,223 - 32,633,832 (+)	NCBI		HuRef
CHM1_1	19	36,121,512 - 36,130,119 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	38,173,991 - 38,182,639 (+)	NCBI		T2T-CHM13v2.0

Rbm42
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	30,340,420 - 30,349,653 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	30,340,424 - 30,349,742 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	30,640,995 - 30,650,228 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	30,640,999 - 30,650,317 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	31,426,014 - 31,435,247 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	30,349,761 - 30,358,925 (-)	NCBI		MGSCv36	mm8
Celera	7	25,232,827 - 25,242,063 (-)	NCBI		Celera
Cytogenetic Map	7	B1	NCBI
cM Map	7	18.95	NCBI

Rbm42
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	95,026,050 - 95,036,020 (-)	NCBI		GRCr8
mRatBN7.2	1	85,898,618 - 85,908,569 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	85,898,625 - 85,908,573 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	91,314,846 - 91,324,699 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	99,781,017 - 99,790,871 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	93,073,133 - 93,082,985 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	89,099,296 - 89,109,248 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	89,099,277 - 89,109,230 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	90,254,914 - 90,264,857 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	85,692,754 - 85,702,684 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	85,770,869 - 85,780,753 (-)	NCBI
Celera	1	80,270,333 - 80,280,263 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Rbm42
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	4,844,747 - 4,854,504 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955468	4,844,780 - 4,854,261 (+)	NCBI	ChiLan1.0	ChiLan1.0

RBM42
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	41,625,564 - 41,634,271 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	43,609,051 - 43,617,721 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	32,559,215 - 32,567,899 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	41,295,079 - 41,303,817 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	41,294,818 - 41,303,817 (+)	Ensembl	panpan1.1		panPan2

RBM42
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	116,978,132 - 116,985,845 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	116,971,365 - 116,985,796 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	116,383,343 - 116,391,065 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	117,581,376 - 117,589,098 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	117,581,172 - 117,589,073 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	117,144,359 - 117,152,078 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	116,768,265 - 116,775,987 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	117,824,179 - 117,831,897 (-)	NCBI		UU_Cfam_GSD_1.0

Rbm42
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	10,960,493 - 10,969,107 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936570	676,537 - 685,419 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936570	676,775 - 685,415 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RBM42
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	45,074,540 - 45,083,239 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	45,074,527 - 45,083,124 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	40,531,490 - 40,540,418 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Rbm42
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624794	7,991,462 - 8,000,804 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624794	7,991,685 - 8,000,314 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in RBM42
180 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20


RefSeq Transcripts	XM_007996385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007996386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007996387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000002451 ⟹ ENSCSAP00000000760

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	6	30,539,721 - 30,548,414 (+)	Ensembl

RefSeq Acc Id:

XM_007996385 ⟹ XP_007994576

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	30,539,718 - 30,548,412 (+)	NCBI
Vero_WHO_p1.0	NW_023666073	8,335,012 - 8,343,699 (+)	NCBI

Sequence:

show sequence

GTCGCTTTCGCTGGACGTCATCCTCGGGAGCCCACCCAGACGAAGGCTGAGAGTAGACAGCAGAACCAGCGGCGGCAGCTAAGCTGAGACAGTAGTAGCGGCGACAACGACGGCGGCAGCGATGGCTG
GGGCGGGGCCAGCCCCGGGACTCCCGGGTGCAGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAGAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGAGATGGCCCTGTTTGAG
CAGGAAGTTCTGGGGGCTCCAGTACCCGGAATCCCAACTGCTGTGCCTGCGGTGCCCACGGTCCCCACGGTCCCCACGGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGTCCAATTATCGC
GACCAACACATACCAGCAGGTCCAGCAGACTCTGGAGGCCCGGGCAGCTGCTGCAGCCACAGTAGTTCCTCCCATGGTGGGTGGCCCTCCTTTTGTAGGCCCCGTTGGCTTTGGCCCTGGTGATCGGA
GTCACCTGGACAGTCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCTGTGGCCCCCCAGAGGGCCCCTATCCTGCGTCCAGCCTTCGTCCCCCACGTGCTACAGAGAGCAGATTCTGCTCTC
TCCTCTGCAGCAGCCGGCCCCCGCCCTATGGCCCTACGGCCCCCTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCTGGACCACCCATGATGCTGCCACCAATGGCTCGGGCTCCAGGTCC
CCCGCTGGGCTCCATGGCTGCGCTGAGGCCCCCTCTGGAAGAACCAGCAGCACCCCGAGAGCTGGGCCTAGGCCTGGGGTTGGGCCTGAAAGAGAAGGAAGAGGCAGTGGTGGCGGCAGCGGCTGGGC
TGGAGGAGGCTAGTGCGGCTGTGGCCGTGGGGGCAGGAGCTGCCCCAGCTGGCCCTGCAGTCATTGGGCCCAGCCTGCCTCTGGCCCTGGCCATGCCCTTGCCTGAGCCTGAGCCCCTGCCCCTCCCG
CTGGAGGTCGTCCGCGGCCTTCTGCCCCCACTGCGCATTCCTGAACTCCTGTCCCTGCGTCCTCGGCCCCGGCCCCCTCGGCCAGAGCCACCCCCTGGCCTCATGGCTCTTGAGGTCCCAGAGCCCCT
GGGTGAAGACAAGAAGAAGGGGAAGCCAGAGAAATTGAAACGCTGCATTCGCACAGCAGCAGGGAGCAGCTGGGAGGACCCCAGCCTGCTGGAGTGGGATGCAGATGACTTCCGGATCTTCTGTGGGG
ATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATCCGTGACAAGCGCACAGGCAAGACCAAGGGCTACGGCTTCGTCAGCTTC
AAGGACCCCAGCGACTACGTGCGCGCCATGCGTGAGATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGTAAGAGTATGTGGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCAGAA
GGAAAAGAAGAAGCTGGGCCTCAGATAGGGTCTGTGGCCAGGCACCCGCTCCCACCTGGCCGGGCGCTGGCTCCTCCCTCAGTTCTCTTTGGAAAACCCCCAGCTGTCCACCCATCCCCTGCCCCAAA
ACCAGTTTCAATAAATTTATGTTCATTTCCA

hide sequence

RefSeq Acc Id:

XM_007996386 ⟹ XP_007994577

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	30,539,718 - 30,548,412 (+)	NCBI
Vero_WHO_p1.0	NW_023666073	8,335,021 - 8,343,699 (+)	NCBI

Sequence:

show sequence

GTCGCTTTCGCTGGACGTCATCCTCGGGAGCCCACCCAGACGAAGGCTGAGAGTAGACAGCAGA
ACCAGCGGCGGCAGCTAAGCTGAGACAGTAGTAGCGGCGACAACGACGGCGGCAGCGATGGCTGGGGCGGGGCCAGCCCCGGGACTCCCGGGTGCAGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGG
CATCCCGGGCAAGAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGAGATGGCCCTGTTTGAGCAGGAAGTTCTGGGGGCTCCAGTACCCGGAATCCCAACTGCTGTGCCTGCGGTGCCCACGGTCC
CCACGGTCCCCACGGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGTCCAATTATCGCGACCAACACATACCAGCAGGTCCAGCAGACTCTGGAGGCCCGGGCAGCTGCTGCAGCCACAGTA
GTTCCTCCCATGGTGGGTGGCCCTCCTTTTGTAGGCCCCGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGTCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCTGTGGCCCCCCA
GAGGGCCCCTATCCTGCGTCCAGCCTTCGTCCCCCACGTGCTACAGAGAGCAGCAGCCGGCCCCCGCCCTATGGCCCTACGGCCCCCTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCTG
GACCACCCATGATGCTGCCACCAATGGCTCGGGCTCCAGGTCCCCCGCTGGGCTCCATGGCTGCGCTGAGGCCCCCTCTGGAAGAACCAGCAGCACCCCGAGAGCTGGGCCTAGGCCTGGGGTTGGGC
CTGAAAGAGAAGGAAGAGGCAGTGGTGGCGGCAGCGGCTGGGCTGGAGGAGGCTAGTGCGGCTGTGGCCGTGGGGGCAGGAGCTGCCCCAGCTGGCCCTGCAGTCATTGGGCCCAGCCTGCCTCTGGC
CCTGGCCATGCCCTTGCCTGAGCCTGAGCCCCTGCCCCTCCCGCTGGAGGTCGTCCGCGGCCTTCTGCCCCCACTGCGCATTCCTGAACTCCTGTCCCTGCGTCCTCGGCCCCGGCCCCCTCGGCCAG
AGCCACCCCCTGGCCTCATGGCTCTTGAGGTCCCAGAGCCCCTGGGTGAAGACAAGAAGAAGGGGAAGCCAGAGAAATTGAAACGCTGCATTCGCACAGCAGCAGGGAGCAGCTGGGAGGACCCCAGC
CTGCTGGAGTGGGATGCAGATGACTTCCGGATCTTCTGTGGGGATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATCCGTGA
CAAGCGCACAGGCAAGACCAAGGGCTACGGCTTCGTCAGCTTCAAGGACCCCAGCGACTACGTGCGCGCCATGCGTGAGATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGTAAGAGTA
TGTGGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCAGAAGGAAAAGAAGAAGCTGGGCCTCAGATAGGGTCTGTGGCCAGGCACCCGCTCCCACCTGGCCGGGCGCTGGCTCCTCCCTCAGTTC
TCTTTGGAAAACCCCCAGCTGTCCACCCATCCCCTGCCCCAAAACCAGTTTCAATAAATTTATGTTCATTTCCA

hide sequence

RefSeq Acc Id:

XM_007996387 ⟹ XP_007994578

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	6	30,539,719 - 30,548,412 (+)	NCBI
Vero_WHO_p1.0	NW_023666073	8,335,027 - 8,343,699 (+)	NCBI

Sequence:

show sequence

TCGCTTTCGCTGGACGTCATCCTCGGGAGCCCACCCAGACGAAGGCTGAGAGTAGACAGCAGAACCAGCGGCGGCAGCTAAGCTGAGACAGTAGTAGCGGCGACAACGACGGCGGCAGCGATGGCTGG
GGCGGGGCCAGCCCCGGGACTCCCGGGTGCAGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAGAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGAGATGGCCCTGTTTGAGC
AGGAAGTTCTGGGGGCTCCAGTACCCGGAATCCCAACTGCTGTGCCTGCGGTGCCCACGGTCCCCACGGTCCCCACGGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGTCCAATTATCGCG
ACCAACACATACCAGCAGGTCCAGCAGACTCTGGAGGCCCGGGCAGCTGCTGCAGCCACAGTAGTTCCTCCCATGGTGGGTGGCCCTCCTTTTGTAGGCCCCGTTGGCTTTGGCCCTGGTGATCGGAG
TCACCTGGACAGTCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCAGCCGGCCCCCGCCCTATGGCCCTACGGCCCCCTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCTGGAC
CACCCATGATGCTGCCACCAATGGCTCGGGCTCCAGGTCCCCCGCTGGGCTCCATGGCTGCGCTGAGGCCCCCTCTGGAAGAACCAGCAGCACCCCGAGAGCTGGGCCTAGGCCTGGGGTTGGGCCTG
AAAGAGAAGGAAGAGGCAGTGGTGGCGGCAGCGGCTGGGCTGGAGGAGGCTAGTGCGGCTGTGGCCGTGGGGGCAGGAGCTGCCCCAGCTGGCCCTGCAGTCATTGGGCCCAGCCTGCCTCTGGCCCT
GGCCATGCCCTTGCCTGAGCCTGAGCCCCTGCCCCTCCCGCTGGAGGTCGTCCGCGGCCTTCTGCCCCCACTGCGCATTCCTGAACTCCTGTCCCTGCGTCCTCGGCCCCGGCCCCCTCGGCCAGAGC
CACCCCCTGGCCTCATGGCTCTTGAGGTCCCAGAGCCCCTGGGTGAAGACAAGAAGAAGGGGAAGCCAGAGAAATTGAAACGCTGCATTCGCACAGCAGCAGGGAGCAGCTGGGAGGACCCCAGCCTG
CTGGAGTGGGATGCAGATGACTTCCGGATCTTCTGTGGGGATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATCCGTGACAA
GCGCACAGGCAAGACCAAGGGCTACGGCTTCGTCAGCTTCAAGGACCCCAGCGACTACGTGCGCGCCATGCGTGAGATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGTAAGAGTATGT
GGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCAGAAGGAAAAGAAGAAGCTGGGCCTCAGATAGGGTCTGTGGCCAGGCACCCGCTCCCACCTGGCCGGGCGCTGGCTCCTCCCTCAGTTCTCT
TTGGAAAACCCCCAGCTGTCCACCCATCCCCTGCCCCAAAACCAGTTTCAATAAATTTATGTTCATTTCCA

hide sequence


Protein RefSeqs	XP_007994576	(Get FASTA)	NCBI Sequence Viewer
	XP_007994577	(Get FASTA)	NCBI Sequence Viewer
	XP_007994578	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000000760.1

RefSeq Acc Id:	XP_007994576 ⟸ XM_007996385
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007994577 ⟸ XM_007996386
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_007994578 ⟸ XM_007996387
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSCSAP00000000760 ⟸ ENSCSAT00000002451

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000004422	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000002451.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RBM42_RRM	UniProtKB/TrEMBL
	RRM-Poly(A)_Binding	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
NCBI Gene	RBM42	ENTREZGENE
PANTHER	RNA-BINDING PROTEIN 42	UniProtKB/TrEMBL
	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
SMART	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A0D9QWM1_CHLSB	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Imported Disease Annotations - ClinVar