MBD1 (methyl-CpG binding domain protein 1) - Rat Genome Database

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Gene: MBD1 (methyl-CpG binding domain protein 1) Chlorocebus sabaeus
Analyze
Symbol: MBD1
Name: methyl-CpG binding domain protein 1
RGD ID: 18758080
Description: ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH autistic disorder (ortholog); Experimental Seizures (ortholog); intellectual disability (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); heterochromatin (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: methyl-CpG-binding domain protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11830,675,419 - 30,690,111 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1830,675,653 - 30,685,946 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MBD1Green Monkeyautistic disorder  ISOMbd1 (Mus musculus)9068941 RGDPMID:18385101 and REF_RGD_ID:9588655
MBD1Green MonkeyExperimental Seizures  ISOMbd1 (Rattus norvegicus)9068941mRNA:increased expression:dentate gyrusRGDPMID:12123686 and REF_RGD_ID:9587847
MBD1Green Monkeylung cancer susceptibilityISOMBD1 (Homo sapiens)9068941DNA:snp::c.1221+135T>A (rs140689) (human)RGDPMID:18668384 and REF_RGD_ID:9588657
MBD1Green Monkeylung cancer susceptibilityISOMBD1 (Homo sapiens)9068941DNA:snps more ...RGDPMID:16284366 and REF_RGD_ID:9588651
MBD1Green Monkeytransient cerebral ischemia  ISOMbd1 (Rattus norvegicus)9068941mRNA:increased expression:hippocampusRGDPMID:12421618 and REF_RGD_ID:9587846
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MBD1Green Monkeyintellectual disability  ISOMBD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MBD1Green MonkeyProstatic Neoplasms  ISOMBD1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29610475


Biological Process
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MBD1Green MonkeyDNA methylation-dependent constitutive heterochromatin formation involved_inIEAPANTHER:PTN000273842150520179 TreeGrafterGO_REF:0000118
MBD1Green Monkeyepigenetic regulation of gene expression  ISOMbd1 (Rattus norvegicus)9068941DNA methylationRGDPMID:20735989 and REF_RGD_ID:9588647
MBD1Green Monkeynegative regulation of astrocyte differentiation  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:16881068 and REF_RGD_ID:9588644
MBD1Green Monkeynegative regulation of gene expression  ISOMbd1 (Rattus norvegicus)9068941GfapRGDPMID:16881068 and REF_RGD_ID:9588644
MBD1Green Monkeynegative regulation of transcription by RNA polymerase II involved_inIEAPANTHER:PTN000273842150520179 TreeGrafterGO_REF:0000118
MBD1Green Monkeyneuron differentiation  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:19660178 and REF_RGD_ID:9588289
MBD1Green Monkeyresponse to bisphenol A  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:22109888 and REF_RGD_ID:9588666
MBD1Green Monkeyresponse to cocaine  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:16670375 and REF_RGD_ID:2306447
MBD1Green Monkeyresponse to estradiol  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:22109888 and REF_RGD_ID:9588666
MBD1Green Monkeyresponse to nutrient levels  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:16702315 and REF_RGD_ID:9588248
MBD1Green Monkeyresponse to xenobiotic stimulus  ISOMbd1 (Rattus norvegicus)9068941fluoxetineRGDPMID:16670375 and REF_RGD_ID:2306447
MBD1Green Monkeyventricular cardiac muscle tissue development  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:20735989 and REF_RGD_ID:9588647
1 to 12 of 12 rows

Cellular Component
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MBD1Green Monkeychromatin  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:18689796 and REF_RGD_ID:9588634
MBD1Green Monkeychromatin located_inISOMbd1 (Mus musculus)9068941 PMID:9774669MGIPMID:9774669
MBD1Green Monkeycytoplasm located_inISOMbd1 (Mus musculus)9068941 PMID:17546630MGIPMID:17546630
MBD1Green Monkeyheterochromatin located_inISOMbd1 (Mus musculus)9068941 PMID:14519686MGIPMID:14519686
MBD1Green Monkeyintracellular membrane-bounded organelle located_inIEAUniProtKB:Q9UIS9 and ensembl:ENSP00000269468150520179 EnsemblGO_REF:0000107
MBD1Green Monkeynuclear matrix located_inISOMbd1 (Mus musculus)9068941 PMID:15777793UniProtPMID:15777793
MBD1Green Monkeynuclear speck located_inISOMbd1 (Mus musculus)9068941 PMID:15777793UniProtPMID:15777793
MBD1Green Monkeynucleolus NOT|located_inISOMbd1 (Mus musculus)9068941 PMID:17546630MGIPMID:17546630
MBD1Green Monkeynucleoplasm located_inIEAUniProtKB:Q9UIS9 and ensembl:ENSP00000269468150520179 EnsemblGO_REF:0000107
MBD1Green Monkeynucleoplasm located_inIEAARBA:ARBA00026290150520179 UniProtGO_REF:0000117
MBD1Green Monkeynucleus located_inIEAPANTHER:PTN000273842150520179 TreeGrafterGO_REF:0000118
MBD1Green Monkeynucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
1 to 12 of 12 rows

Molecular Function
1 to 20 of 20 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MBD1Green Monkeychromatin binding  ISOMbd1 (Rattus norvegicus)9068941 RGDPMID:18689796 and REF_RGD_ID:9588634
MBD1Green MonkeyDNA binding enablesIEAInterPro:IPR001739 more ...150520179 InterProGO_REF:0000002
MBD1Green MonkeyDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
MBD1Green MonkeyDNA binding enablesIEAARBA:ARBA00029224150520179 UniProtGO_REF:0000117
MBD1Green Monkeydouble-stranded methylated DNA binding enablesIEAUniProtKB:Q9UIS9 and ensembl:ENSP00000269468150520179 EnsemblGO_REF:0000107
MBD1Green Monkeymetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
MBD1Green Monkeymethyl-CpG binding enablesIEAUniProtKB:Q9UIS9 and ensembl:ENSP00000269468150520179 EnsemblGO_REF:0000107
MBD1Green Monkeymethyl-CpG binding enablesIEAPANTHER:PTN000273842150520179 TreeGrafterGO_REF:0000118
MBD1Green Monkeyprotein binding enablesISOUniProtKB:Q6VMQ69068941 PMID:12665582UniProtPMID:12665582
MBD1Green Monkeyprotein binding enablesISOUniProtKB:Q9W6V69068941 PMID:15777793UniProtPMID:15777793
MBD1Green Monkeyprotein binding enablesISOUniProtKB:O15379 and UniProtKB:Q151569068941 PMID:16432238IntActPMID:16432238
MBD1Green Monkeyprotein binding enablesISOUniProtKB:O43463 more ...9068941 PMID:12711603IntActPMID:12711603
MBD1Green Monkeyprotein binding enablesISOUniProtKB:P459739068941 PMID:19498464IntActPMID:19498464
MBD1Green Monkeyprotein binding enablesISOUniProtKB:Q8TBE09068941 PMID:19666599UniProtPMID:19666599
MBD1Green Monkeyprotein binding enablesISOUniProtKB:Q994359068941 PMID:21653829IntActPMID:21653829
MBD1Green Monkeyprotein binding enablesISOUniProtKB:P428589068941 PMID:23275563IntActPMID:23275563
MBD1Green Monkeyunmethylated CpG binding enablesIEAUniProtKB:Q9UIS9 and ensembl:ENSP00000269468150520179 EnsemblGO_REF:0000107
MBD1Green Monkeyzinc ion binding enablesIEAInterPro:IPR002857150520179 InterProGO_REF:0000002
MBD1Green Monkeyzinc ion binding enablesIEAUniProtKB:Q9UIS9 and ensembl:ENSP00000269468150520179 EnsemblGO_REF:0000107
MBD1Green Monkeyzinc ion binding enablesIEAUniProtKB-KW:KW-0863150520179 UniProtGO_REF:0000043
1 to 20 of 20 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MBD1Green MonkeyDNA modification pathway   ISOMBD1 (Homo sapiens)9068941 RGDPMID:23324617 and REF_RGD_ID:8695954
PMID:22301074  



MBD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11830,675,419 - 30,690,111 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1830,675,653 - 30,685,946 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
MBD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381850,266,885 - 50,281,767 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1850,266,882 - 50,281,774 (-)EnsemblGRCh38hg38GRCh38
GRCh371847,793,255 - 47,808,137 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361846,049,214 - 46,062,142 (-)NCBINCBI36Build 36hg18NCBI36
Celera1844,651,771 - 44,664,698 (-)NCBICelera
Cytogenetic Map18q21.1NCBI
HuRef1844,647,697 - 44,662,584 (-)NCBIHuRef
CHM1_11847,788,841 - 47,803,733 (-)NCBICHM1_1
T2T-CHM13v2.01850,468,627 - 50,483,509 (-)NCBIT2T-CHM13v2.0
Mbd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391874,400,676 - 74,415,808 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1874,400,676 - 74,415,803 (+)EnsemblGRCm39 Ensembl
GRCm381874,267,605 - 74,282,737 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1874,267,605 - 74,282,732 (+)EnsemblGRCm38mm10GRCm38
MGSCv371874,427,942 - 74,442,338 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361874,393,660 - 74,408,054 (+)NCBIMGSCv36mm8
Celera1875,497,613 - 75,512,033 (+)NCBICelera
Cytogenetic Map18E2NCBI
cM Map1850.7NCBI
Mbd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81870,145,093 - 70,159,744 (+)NCBIGRCr8
mRatBN7.21867,869,870 - 67,884,501 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1867,869,992 - 67,886,554 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1869,978,196 - 69,992,672 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01870,643,315 - 70,657,818 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01868,509,485 - 68,523,993 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01870,248,568 - 70,263,190 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1870,248,713 - 70,263,164 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01869,390,120 - 69,404,741 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41871,068,257 - 71,082,734 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11871,141,457 - 71,155,910 (+)NCBI
Celera1866,048,059 - 66,062,538 (+)NCBICelera
Cytogenetic Map18q12.2NCBI
Mbd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540235,319,810 - 35,334,678 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540235,320,755 - 35,334,751 (-)NCBIChiLan1.0ChiLan1.0
MBD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21767,796,740 - 67,809,690 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11853,489,343 - 53,502,163 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01843,647,395 - 43,662,266 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11846,996,905 - 47,009,831 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1846,996,905 - 47,009,831 (-)Ensemblpanpan1.1panPan2
MBD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1778,597,688 - 78,611,303 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl778,597,746 - 78,651,472 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha778,002,061 - 78,017,756 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0778,661,476 - 78,677,177 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl778,661,468 - 78,674,941 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1778,374,132 - 78,389,826 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0778,406,559 - 78,422,248 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0778,691,272 - 78,706,975 (+)NCBIUU_Cfam_GSD_1.0
Mbd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494437,609,864 - 37,629,471 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649712,848,874 - 12,871,639 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649712,848,918 - 12,868,504 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MBD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl199,900,801 - 99,917,323 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1199,848,193 - 99,917,347 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21109,589,957 - 109,606,298 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Mbd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477813,896,447 - 13,907,656 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477813,892,179 - 13,907,576 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in MBD1
217 total Variants



ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20


1 to 30 of 65 rows
RefSeq Transcripts XM_007974015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007974045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037982289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037982290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 65 rows

Ensembl Acc Id: ENSCSAT00000016169   ⟹   ENSCSAP00000014090
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1830,675,653 - 30,685,946 (+)Ensembl
RefSeq Acc Id: XM_007974015   ⟹   XP_007972206
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,419 - 30,688,583 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974019   ⟹   XP_007972210
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,721 - 30,687,713 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974020   ⟹   XP_007972211
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,721 - 30,687,654 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,834,585 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974025   ⟹   XP_007972216
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,419 - 30,686,405 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974026   ⟹   XP_007972217
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,419 - 30,688,583 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974031   ⟹   XP_007972222
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,419 - 30,686,405 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974034   ⟹   XP_007972225
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,419 - 30,686,405 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974036   ⟹   XP_007972227
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,721 - 30,686,405 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974037   ⟹   XP_007972228
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,419 - 30,688,583 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974038   ⟹   XP_007972229
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,722 - 30,686,405 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974039   ⟹   XP_007972230
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,419 - 30,688,583 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974041   ⟹   XP_007972232
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,719 - 30,688,583 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974042   ⟹   XP_007972233
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,721 - 30,686,405 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007974044   ⟹   XP_007972235
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11830,675,419 - 30,688,583 (+)NCBI
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
Sequence:
RefSeq Acc Id: XM_037982289   ⟹   XP_037838217
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982290   ⟹   XP_037838218
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982291   ⟹   XP_037838219
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982292   ⟹   XP_037838220
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982293   ⟹   XP_037838221
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982294   ⟹   XP_037838222
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982295   ⟹   XP_037838223
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982296   ⟹   XP_037838224
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982297   ⟹   XP_037838225
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982298   ⟹   XP_037838226
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982299   ⟹   XP_037838227
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982300   ⟹   XP_037838228
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982301   ⟹   XP_037838229
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982302   ⟹   XP_037838230
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982303   ⟹   XP_037838231
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982304   ⟹   XP_037838232
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982305   ⟹   XP_037838233
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982306   ⟹   XP_037838234
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982307   ⟹   XP_037838235
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982308   ⟹   XP_037838236
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982309   ⟹   XP_037838237
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982310   ⟹   XP_037838238
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982311   ⟹   XP_037838239
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982312   ⟹   XP_037838240
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982313   ⟹   XP_037838241
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982314   ⟹   XP_037838242
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982315   ⟹   XP_037838243
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982316   ⟹   XP_037838244
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982317   ⟹   XP_037838245
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982318   ⟹   XP_037838246
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982319   ⟹   XP_037838247
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982320   ⟹   XP_037838248
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982321   ⟹   XP_037838249
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982322   ⟹   XP_037838250
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982323   ⟹   XP_037838251
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
RefSeq Acc Id: XM_037982324   ⟹   XP_037838252
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660504,822,001 - 4,835,406 (+)NCBI
1 to 30 of 52 rows
Protein RefSeqs XP_007972206 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972210 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972211 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972216 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972217 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972222 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972225 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972227 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972228 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972229 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972230 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972232 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972233 (Get FASTA)   NCBI Sequence Viewer  
  XP_007972235 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838217 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838218 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838219 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838220 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838221 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838222 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838223 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838224 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838225 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838226 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838227 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838228 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838229 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838230 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838231 (Get FASTA)   NCBI Sequence Viewer  
  XP_037838232 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 52 rows
1 to 5 of 51 rows
1 to 5 of 51 rows
RefSeq Acc Id: XP_007972217   ⟸   XM_007974026
- Peptide Label: isoform X19
- UniProtKB: A0A0D9RZQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007972206   ⟸   XM_007974015
- Peptide Label: isoform X6
RefSeq Acc Id: XP_007972230   ⟸   XM_007974039
- Peptide Label: isoform X32
RefSeq Acc Id: XP_007972235   ⟸   XM_007974044
- Peptide Label: isoform X34
RefSeq Acc Id: XP_007972228   ⟸   XM_007974037
- Peptide Label: isoform X30



1 to 16 of 16 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCSAG00000018070 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000016169.1 UniProtKB/TrEMBL
Gene3D-CATH Methyl-cpg-binding Protein 2, Chain A UniProtKB/TrEMBL
InterPro DNA-bd_dom_sf UniProtKB/TrEMBL
  Methyl_CpG_DNA-bd UniProtKB/TrEMBL
  Znf_CXXC UniProtKB/TrEMBL
NCBI Gene MBD1 ENTREZGENE
PANTHER METHYL-CPG BINDING PROTEIN, MBD UniProtKB/TrEMBL
  METHYL-CPG-BINDING DOMAIN PROTEIN 1 UniProtKB/TrEMBL
Pfam MBD UniProtKB/TrEMBL
  zf-CXXC UniProtKB/TrEMBL
PROSITE MBD UniProtKB/TrEMBL
  ZF_CXXC UniProtKB/TrEMBL
SMART MBD UniProtKB/TrEMBL
Superfamily-SCOP SSF54171 UniProtKB/TrEMBL
UniProt A0A0D9RZQ1 ENTREZGENE, UniProtKB/TrEMBL
1 to 16 of 16 rows