DPP3 (dipeptidyl peptidase 3) - Rat Genome Database

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Gene: DPP3 (dipeptidyl peptidase 3) Chlorocebus sabaeus
Analyze
Symbol: DPP3
Name: dipeptidyl peptidase 3
RGD ID: 18582231
Description: ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN protein catabolic process (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); Bardet-Biedl syndrome (ortholog); congenital muscular dystrophy-dystroglycanopathy type A13 (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.117,766,110 - 7,797,152 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl17,766,160 - 7,795,302 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038105,050,080 - 105,079,951 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DPP3Green MonkeyAicardi-Goutieres Syndrome 3  ISODPP3 (Homo sapiens)8554872ClinVar Annotator: match by term: Aicardi-Goutieres syndrome 3ClinVarPMID:28492532
DPP3Green MonkeyBardet-Biedl syndrome  ISODPP3 (Homo sapiens)8554872ClinVar Annotator: match by term: Bardet-Biedl syndromeClinVarPMID:12118255 more ...
DPP3Green Monkeycongenital muscular dystrophy-dystroglycanopathy type A13  ISODPP3 (Homo sapiens)8554872ClinVar Annotator: match by term: Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A13ClinVarPMID:22219654 and PMID:28492532
DPP3Green Monkeyglycogen storage disease V  ISODPP3 (Homo sapiens)8554872ClinVar Annotator: match by term: Glycogen storage disease and type VClinVarPMID:12118255 more ...
DPP3Green Monkeyimmunodeficiency 90  ISODPP3 (Homo sapiens)8554872ClinVar Annotator: match by term: Infections more ...ClinVarPMID:28492532
DPP3Green Monkeyintellectual disability  ISODPP3 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DPP3Green Monkeyprotein catabolic process  ISODpp3 (Rattus norvegicus)9068941 RGDPMID:10387075 and REF_RGD_ID:728455
DPP3Green Monkeyproteolysis involved_inIEAUniProtKB:Q9NY33 and ensembl:ENSP00000432782150520179 EnsemblGO_REF:0000107
DPP3Green Monkeyproteolysis involved_inIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
DPP3Green Monkeyproteolysis involved_inIEAInterPro:IPR005317150520179 InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DPP3Green Monkeycytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
DPP3Green Monkeycytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
DPP3Green Monkeycytoplasm located_inIEAPANTHER:PTN000466759150520179 TreeGrafterGO_REF:0000118
DPP3Green Monkeycytoplasm located_inIEAInterPro:IPR005317150520179 InterProGO_REF:0000002
DPP3Green Monkeycytosol located_inIEAUniProtKB:G3V180 more ...150520179 EnsemblGO_REF:0000107

Molecular Function
1 to 15 of 15 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DPP3Green Monkeyaminopeptidase activity enablesIEAUniProtKB-KW:KW-0031150520179 UniProtGO_REF:0000043
DPP3Green Monkeydipeptidyl-peptidase activity enablesIEAUniProtKB:Q9NY33 and ensembl:ENSP00000432782150520179 EnsemblGO_REF:0000107
DPP3Green Monkeydipeptidyl-peptidase activity enablesIEAPANTHER:PTN000466759150520179 TreeGrafterGO_REF:0000118
DPP3Green Monkeydipeptidyl-peptidase activity enablesIEAInterPro:IPR005317150520179 InterProGO_REF:0000002
DPP3Green Monkeydipeptidyl-peptidase activity enablesIEAUniRule:UR000459754150520179 UniProtGO_REF:0000104
DPP3Green Monkeydipeptidyl-peptidase activity enablesIEAEC:3.4.14.4150520179 UniProtGO_REF:0000003
DPP3Green Monkeyhydrolase activity enablesIEAUniProtKB-KW:KW-0378150520179 UniProtGO_REF:0000043
DPP3Green Monkeymetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
DPP3Green Monkeymetalloexopeptidase activity enablesIEAInterPro:IPR005317150520179 InterProGO_REF:0000002
DPP3Green Monkeymetallopeptidase activity enablesIEAUniRule:UR000459754150520179 UniProtGO_REF:0000104
DPP3Green Monkeymetallopeptidase activity enablesIEAUniProtKB-KW:KW-0482150520179 UniProtGO_REF:0000043
DPP3Green Monkeypeptidase activity enablesIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
DPP3Green Monkeyprotein binding enablesISOUniProtKB:Q141459068941 PMID:19615732 more ...IntActPMID:19615732 more ...
DPP3Green Monkeyzinc ion binding  ISODpp3 (Rattus norvegicus)9068941 RGDPMID:10387075 and REF_RGD_ID:728455
DPP3Green Monkeyzinc ion binding enablesIEAUniProtKB:Q9NY33 and ensembl:ENSP00000432782150520179 EnsemblGO_REF:0000107
1 to 15 of 15 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DPP3Green Monkeynuclear factor, erythroid 2 like 2 signaling pathway   ISODPP3 (Homo sapiens)9068941 RGDPMID:24647116 and REF_RGD_ID:11535066
PMID:22301074   PMID:30032202  



DPP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.117,766,110 - 7,797,152 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl17,766,160 - 7,795,302 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038105,050,080 - 105,079,951 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
DPP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381166,480,434 - 66,509,657 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1166,480,013 - 66,509,657 (+)EnsemblGRCh38hg38GRCh38
GRCh371166,247,905 - 66,277,128 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361166,004,456 - 66,033,706 (+)NCBINCBI36Build 36hg18NCBI36
Build 341166,004,470 - 66,033,700NCBI
Celera1163,568,130 - 63,597,365 (+)NCBICelera
Cytogenetic Map11q13.2NCBI
HuRef1162,575,380 - 62,605,040 (+)NCBIHuRef
CHM1_11166,131,228 - 66,160,856 (+)NCBICHM1_1
T2T-CHM13v2.01166,476,691 - 66,505,896 (+)NCBIT2T-CHM13v2.0
Dpp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39194,957,257 - 4,978,315 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl194,957,257 - 4,978,315 (-)EnsemblGRCm39 Ensembl
GRCm38194,907,229 - 4,928,287 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl194,907,229 - 4,928,287 (-)EnsemblGRCm38mm10GRCm38
MGSCv37194,907,229 - 4,928,287 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,907,229 - 4,928,229 (-)NCBIMGSCv36mm8
Celera194,780,315 - 4,801,142 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.15NCBI
Dpp3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81211,634,067 - 211,657,898 (-)NCBIGRCr8
mRatBN7.21202,204,683 - 202,228,501 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1202,204,693 - 202,228,541 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1210,557,769 - 210,581,666 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01217,650,095 - 217,673,914 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01210,341,122 - 210,364,944 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01220,166,124 - 220,189,762 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1220,166,127 - 220,188,541 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01227,097,122 - 227,120,699 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43138,286,277 - 138,288,887 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13138,191,849 - 138,194,460 (+)NCBI
Celera1199,744,187 - 199,768,442 (-)NCBICelera
Cytogenetic Map1q43NCBI
Dpp3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542218,844,138 - 18,865,050 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542218,844,391 - 18,865,050 (-)NCBIChiLan1.0ChiLan1.0
DPP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2967,706,225 - 67,735,729 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11168,748,922 - 68,778,429 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01161,836,463 - 61,867,303 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11165,161,889 - 65,191,398 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1165,161,892 - 65,191,398 (+)Ensemblpanpan1.1panPan2
DPP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11850,835,739 - 50,868,777 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1850,835,735 - 50,868,682 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1849,444,448 - 49,477,487 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01851,874,232 - 51,907,340 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1851,874,233 - 51,907,237 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11850,975,094 - 51,008,130 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01850,548,646 - 50,581,735 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01851,338,804 - 51,371,895 (-)NCBIUU_Cfam_GSD_1.0
Dpp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049476,634,562 - 6,656,783 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365993,076,909 - 3,097,785 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365993,076,909 - 3,098,012 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DPP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl25,907,252 - 5,946,734 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.125,907,251 - 5,948,019 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.224,983,433 - 5,022,962 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Dpp3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476719,894,279 - 19,916,987 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476719,894,386 - 19,916,996 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in DPP3
541 total Variants



ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20



Ensembl Acc Id: ENSCSAT00000006279   ⟹   ENSCSAP00000004484
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl17,766,160 - 7,795,302 (-)Ensembl
RefSeq Acc Id: XM_037999034   ⟹   XP_037854962
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666038105,050,080 - 105,079,673 (-)NCBI
RefSeq Acc Id: XM_037999035   ⟹   XP_037854963
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666038105,050,080 - 105,079,951 (-)NCBI
RefSeq Acc Id: XM_037999036   ⟹   XP_037854964
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666038105,050,080 - 105,079,622 (-)NCBI
RefSeq Acc Id: XM_037999037   ⟹   XP_037854965
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666038105,050,080 - 105,078,583 (-)NCBI
RefSeq Acc Id: XM_037999038   ⟹   XP_037854966
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666038105,050,080 - 105,078,536 (-)NCBI
Protein RefSeqs XP_037854962 (Get FASTA)   NCBI Sequence Viewer  
  XP_037854963 (Get FASTA)   NCBI Sequence Viewer  
  XP_037854964 (Get FASTA)   NCBI Sequence Viewer  
  XP_037854965 (Get FASTA)   NCBI Sequence Viewer  
  XP_037854966 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000004484.1
Ensembl Acc Id: ENSCSAP00000004484   ⟸   ENSCSAT00000006279
RefSeq Acc Id: XP_037854963   ⟸   XM_037999035
- Peptide Label: isoform X2
- UniProtKB: A0A0D9R795 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037854962   ⟸   XM_037999034
- Peptide Label: isoform X1
- UniProtKB: A0A0D9R795 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037854964   ⟸   XM_037999036
- Peptide Label: isoform X3
- UniProtKB: A0A0D9R795 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037854965   ⟸   XM_037999037
- Peptide Label: isoform X3
- UniProtKB: A0A0D9R795 (UniProtKB/TrEMBL)



1 to 11 of 11 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCSAG00000008287 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000006279.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.540.30 UniProtKB/TrEMBL
InterPro Dipeptidyl-peptase3 UniProtKB/TrEMBL
  Peptidase_M49 UniProtKB/TrEMBL
NCBI Gene DPP3 ENTREZGENE
PANTHER DIPEPTIDYL PEPTIDASE 3 UniProtKB/TrEMBL
  PTHR23422 UniProtKB/TrEMBL
Pfam Peptidase_M49 UniProtKB/TrEMBL
PIRSF Dipeptidyl-peptidase_III UniProtKB/TrEMBL
UniProt A0A0D9R795 ENTREZGENE, UniProtKB/TrEMBL
1 to 11 of 11 rows