Symbol:
Ciart
Name:
circadian associated repressor of transcription
RGD ID:
1618157
MGI Page
MGI
Description:
Enables E-box binding activity. Involved in circadian regulation of gene expression; locomotor rhythm; and negative regulation of DNA-templated transcription. Located in nucleus. Orthologous to human CIART (circadian associated repressor of transcription).
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
chIP-derived repressor of network oscillator; Chrono; circadian transcriptional repressor C1orf51 homolog; circadian-associated transcriptional repressor; computationally highlighted repressor of the network oscillator; Gm129; hypothetical protein LOC229599; uncharacterized protein C1orf51 homolog
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
CIART (circadian associated repressor of transcription) HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):
Ciart (circadian associated repressor of transcription) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Ciart (circadian associated repressor of transcription) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
CIART (circadian associated repressor of transcription) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
CIART (circadian associated repressor of transcription) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Ciart (circadian associated repressor of transcription) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
CIART (circadian associated repressor of transcription) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
CIART (circadian associated repressor of transcription) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Ciart (circadian associated repressor of transcription) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
CIART (circadian associated repressor of transcription)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Rattus norvegicus (Norway rat):
Ciart (circadian associated repressor of transcription)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
ciarta (circadian associated repressor of transcription a)
Alliance
DIOPT (Ensembl Compara|InParanoid|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid|ZFIN)
Xenopus tropicalis (tropical clawed frog):
ciart
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Related Pseudogenes:
Gm9176
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 95,785,812 - 95,790,012 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 95,785,815 - 95,789,563 (-) Ensembl GRCm39 Ensembl GRCm38 3 95,878,500 - 95,882,257 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 95,878,503 - 95,882,251 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 95,682,428 - 95,686,151 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 95,963,908 - 95,967,633 (-) NCBI MGSCv36 mm8 Celera 3 97,312,032 - 97,315,756 (-) NCBI Celera Cytogenetic Map 3 F2.1 NCBI cM Map 3 41.42 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Ciart Mouse (-)-epigallocatechin 3-gallate multiple interactions ISO CIART (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in increased expression of CIART mRNA CTD PMID:22079256 Ciart Mouse 17beta-estradiol decreases expression EXP 6480464 Estradiol results in decreased expression of CIART mRNA CTD PMID:39298647 Ciart Mouse 2,2',4,4',5,5'-hexachlorobiphenyl multiple interactions EXP 6480464 [Tetrachlorodibenzodioxin co-treated with 2 more ... CTD PMID:28433925 Ciart Mouse 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of CIART mRNA CTD PMID:26377647 and PMID:28922406 Ciart Mouse 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Ciart (Rattus norvegicus) 6480464 Tetrachlorodibenzodioxin results in increased expression of CIART mRNA CTD PMID:33387578 Ciart Mouse 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO Ciart (Rattus norvegicus) 6480464 Tetrachlorodibenzodioxin results in decreased expression of CIART mRNA CTD PMID:32109520 Ciart Mouse 2,3,7,8-tetrachlorodibenzodioxine multiple interactions EXP 6480464 [Tetrachlorodibenzodioxin co-treated with 2 more ... CTD PMID:28433925 Ciart Mouse 2-hydroxypropanoic acid increases expression ISO CIART (Homo sapiens) 6480464 Lactic Acid results in increased expression of CIART mRNA CTD PMID:30851411 Ciart Mouse 4,4'-sulfonyldiphenol decreases expression ISO CIART (Homo sapiens) 6480464 bisphenol S results in decreased expression of CIART mRNA CTD PMID:27685785 Ciart Mouse 4,4'-sulfonyldiphenol decreases expression EXP 6480464 bisphenol S results in decreased expression of CIART mRNA CTD PMID:33297965 Ciart Mouse 4,4'-sulfonyldiphenol affects expression EXP 6480464 bisphenol S affects the expression of CIART mRNA CTD PMID:39298647 Ciart Mouse ammonium chloride affects expression ISO Ciart (Rattus norvegicus) 6480464 Ammonium Chloride affects the expression of CIART mRNA CTD PMID:16483693 Ciart Mouse antirheumatic drug increases expression ISO CIART (Homo sapiens) 6480464 Antirheumatic Agents results in increased expression of CIART mRNA CTD PMID:24449571 Ciart Mouse arsenite(3-) increases methylation ISO CIART (Homo sapiens) 6480464 arsenite results in increased methylation of CIART promoter CTD PMID:23974009 Ciart Mouse arsenite(3-) multiple interactions ISO CIART (Homo sapiens) 6480464 arsenite promotes the reaction [G3BP1 protein binds to CIART mRNA] CTD PMID:32406909 Ciart Mouse atrazine decreases expression ISO Ciart (Rattus norvegicus) 6480464 Atrazine results in decreased expression of CIART mRNA CTD PMID:36841081 Ciart Mouse benzo[a]pyrene increases expression EXP 6480464 Benzo(a)pyrene results in increased expression of CIART mRNA CTD PMID:27195522 Ciart Mouse benzo[a]pyrene affects methylation ISO CIART (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of CIART promoter CTD PMID:27901495 Ciart Mouse benzo[a]pyrene increases expression ISO CIART (Homo sapiens) 6480464 Benzo(a)pyrene results in increased expression of CIART mRNA CTD PMID:30453624 Ciart Mouse benzo[a]pyrene multiple interactions EXP 6480464 [corannulene co-treated with Benzo(a)pyrene] results in increased expression of CIART mRNA CTD PMID:32417428 Ciart Mouse benzo[b]fluoranthene increases expression EXP 6480464 benzo(b)fluoranthene results in increased expression of CIART mRNA CTD PMID:26377693 Ciart Mouse bis(2-ethylhexyl) phthalate multiple interactions EXP 6480464 [Tetrachlorodibenzodioxin co-treated with 2 more ... CTD PMID:28433925 Ciart Mouse bisphenol A increases expression ISO Ciart (Rattus norvegicus) 6480464 bisphenol A results in increased expression of CIART mRNA CTD PMID:25181051 Ciart Mouse bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of CIART mRNA CTD PMID:32156529 Ciart Mouse bisphenol A decreases expression ISO Ciart (Rattus norvegicus) 6480464 bisphenol A results in decreased expression of CIART mRNA CTD PMID:30816183 and PMID:32528016 Ciart Mouse bisphenol A increases expression ISO CIART (Homo sapiens) 6480464 bisphenol A results in increased expression of CIART mRNA CTD PMID:29275510 Ciart Mouse bisphenol A multiple interactions EXP 6480464 [Tetrachlorodibenzodioxin co-treated with 2 more ... CTD PMID:28433925 Ciart Mouse bisphenol F decreases expression EXP 6480464 bisphenol F results in decreased expression of CIART mRNA CTD PMID:38685157 Ciart Mouse bromobenzene decreases expression ISO Ciart (Rattus norvegicus) 6480464 bromobenzene results in decreased expression of CIART mRNA CTD PMID:32479839 Ciart Mouse cadmium atom decreases expression ISO CIART (Homo sapiens) 6480464 Cadmium results in decreased expression of CIART mRNA CTD PMID:24376830 Ciart Mouse cadmium dichloride increases expression ISO CIART (Homo sapiens) 6480464 Cadmium Chloride results in increased expression of CIART mRNA CTD PMID:38568856 Ciart Mouse carbamazepine affects expression ISO CIART (Homo sapiens) 6480464 Carbamazepine affects the expression of CIART mRNA CTD PMID:25979313 Ciart Mouse carbon nanotube decreases expression EXP 6480464 Nanotubes and Carbon results in decreased expression of CIART mRNA CTD PMID:25554681 Ciart Mouse chlorpyrifos increases expression EXP 6480464 Chlorpyrifos results in increased expression of CIART mRNA CTD PMID:37019170 Ciart Mouse chromium(6+) multiple interactions ISO CIART (Homo sapiens) 6480464 [zinc chromate results in increased abundance of chromium hexavalent ion] which results in increased expression of CIART mRNA CTD PMID:38479592 Ciart Mouse copper(II) sulfate increases expression ISO CIART (Homo sapiens) 6480464 Copper Sulfate results in increased expression of CIART mRNA CTD PMID:19549813 Ciart Mouse cyclosporin A decreases expression ISO CIART (Homo sapiens) 6480464 Cyclosporine results in decreased expression of CIART mRNA CTD PMID:27989131 Ciart Mouse dichloroacetic acid decreases expression EXP 6480464 Dichloroacetic Acid results in decreased expression of CIART mRNA CTD PMID:28962523 Ciart Mouse dimethylarsinic acid multiple interactions EXP 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of CIART mRNA CTD PMID:34876320 Ciart Mouse dioxygen increases expression ISO CIART (Homo sapiens) 6480464 Oxygen deficiency results in increased expression of CIART mRNA CTD PMID:24236059 Ciart Mouse dorsomorphin multiple interactions ISO CIART (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CIART mRNA CTD PMID:27188386 Ciart Mouse doxorubicin decreases expression ISO CIART (Homo sapiens) 6480464 Doxorubicin results in decreased expression of CIART mRNA CTD PMID:29803840 Ciart Mouse endosulfan increases expression ISO Ciart (Rattus norvegicus) 6480464 Endosulfan results in increased expression of CIART mRNA CTD PMID:29391264 Ciart Mouse entinostat decreases expression ISO CIART (Homo sapiens) 6480464 entinostat results in decreased expression of CIART mRNA CTD PMID:32870474 Ciart Mouse epoxiconazole affects expression EXP 6480464 epoxiconazole affects the expression of CIART mRNA CTD PMID:35436446 Ciart Mouse flutamide increases expression ISO Ciart (Rattus norvegicus) 6480464 Flutamide results in increased expression of CIART mRNA CTD PMID:24793618 Ciart Mouse furan increases methylation ISO Ciart (Rattus norvegicus) 6480464 furan results in increased methylation of CIART gene CTD PMID:22079235 Ciart Mouse gentamycin increases expression ISO Ciart (Rattus norvegicus) 6480464 Gentamicins results in increased expression of CIART mRNA CTD PMID:33387578 Ciart Mouse iron dichloride increases expression ISO CIART (Homo sapiens) 6480464 ferrous chloride results in increased expression of CIART mRNA CTD PMID:35984750 Ciart Mouse lead(0) decreases expression ISO CIART (Homo sapiens) 6480464 Lead results in decreased expression of CIART mRNA CTD PMID:19921347 Ciart Mouse maneb multiple interactions EXP 6480464 [Maneb co-treated with Paraquat] results in decreased expression of CIART mRNA CTD PMID:36117858 Ciart Mouse manganese atom multiple interactions ISO CIART (Homo sapiens) 6480464 [manganese chloride results in increased abundance of Manganese] which results in increased expression of CIART mRNA CTD PMID:39836092 Ciart Mouse manganese(0) multiple interactions ISO CIART (Homo sapiens) 6480464 [manganese chloride results in increased abundance of Manganese] which results in increased expression of CIART mRNA CTD PMID:39836092 Ciart Mouse manganese(II) chloride multiple interactions ISO CIART (Homo sapiens) 6480464 [manganese chloride results in increased abundance of Manganese] which results in increased expression of CIART mRNA CTD PMID:39836092 Ciart Mouse methylarsonic acid multiple interactions EXP 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of CIART mRNA CTD PMID:34876320 Ciart Mouse monosodium L-glutamate multiple interactions EXP 6480464 [Sodium Glutamate co-treated with Trans Fatty Acids] results in increased expression of CIART mRNA CTD PMID:19001666 Ciart Mouse N-methyl-4-phenylpyridinium decreases expression ISO CIART (Homo sapiens) 6480464 1-Methyl-4-phenylpyridinium results in decreased expression of CIART mRNA CTD PMID:32870474 Ciart Mouse ozone multiple interactions EXP 6480464 [Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in decreased expression of CIART mRNA and [Air Pollutants results in increased abundance of Ozone] which results in decreased expression of CIART mRNA CTD PMID:34911549 Ciart Mouse paracetamol increases expression ISO CIART (Homo sapiens) 6480464 Acetaminophen results in increased expression of CIART mRNA CTD PMID:21420995 Ciart Mouse paracetamol increases expression ISO Ciart (Rattus norvegicus) 6480464 Acetaminophen results in increased expression of CIART mRNA CTD PMID:33387578 Ciart Mouse paraquat decreases expression ISO Ciart (Rattus norvegicus) 6480464 Paraquat results in decreased expression of CIART mRNA CTD PMID:32680482 Ciart Mouse paraquat multiple interactions EXP 6480464 [Maneb co-treated with Paraquat] results in decreased expression of CIART mRNA CTD PMID:36117858 Ciart Mouse perfluorooctane-1-sulfonic acid multiple interactions EXP 6480464 [perfluorooctane sulfonic acid co-treated with Pectins] results in increased expression of CIART mRNA CTD PMID:36331819 Ciart Mouse potassium chromate multiple interactions ISO CIART (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in increased expression of CIART mRNA CTD PMID:22079256 Ciart Mouse potassium chromate increases expression ISO CIART (Homo sapiens) 6480464 potassium chromate(VI) results in increased expression of CIART mRNA CTD PMID:22079256 Ciart Mouse rac-lactic acid increases expression ISO CIART (Homo sapiens) 6480464 Lactic Acid results in increased expression of CIART mRNA CTD PMID:30851411 Ciart Mouse rotenone affects expression ISO Ciart (Rattus norvegicus) 6480464 Rotenone affects the expression of CIART mRNA CTD PMID:28374803 Ciart Mouse rotenone decreases expression ISO CIART (Homo sapiens) 6480464 Rotenone results in decreased expression of CIART mRNA CTD PMID:32870474 Ciart Mouse SB 431542 multiple interactions ISO CIART (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CIART mRNA CTD PMID:27188386 Ciart Mouse silicon dioxide increases expression ISO CIART (Homo sapiens) 6480464 Silicon Dioxide analog results in increased expression of CIART mRNA CTD PMID:25895662 Ciart Mouse sodium arsenate multiple interactions EXP 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of CIART mRNA CTD PMID:34876320 Ciart Mouse sodium arsenite multiple interactions EXP 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of CIART mRNA CTD PMID:34876320 Ciart Mouse sotorasib multiple interactions ISO CIART (Homo sapiens) 6480464 [sotorasib co-treated with trametinib co-treated with NVP-BKM120] results in decreased expression of CIART mRNA CTD PMID:36139627 Ciart Mouse temozolomide decreases expression ISO CIART (Homo sapiens) 6480464 Temozolomide results in decreased expression of CIART mRNA CTD PMID:31758290 Ciart Mouse tetrachloroethene increases expression EXP 6480464 Tetrachloroethylene results in increased expression of CIART mRNA CTD PMID:28973375 Ciart Mouse tetrachloromethane decreases expression ISO Ciart (Rattus norvegicus) 6480464 Carbon Tetrachloride results in decreased expression of CIART mRNA CTD PMID:31150632 Ciart Mouse tetraphene increases expression EXP 6480464 benz(a)anthracene results in increased expression of CIART mRNA CTD PMID:26377693 Ciart Mouse thioacetamide decreases expression ISO Ciart (Rattus norvegicus) 6480464 Thioacetamide results in decreased expression of CIART mRNA CTD PMID:34492290 Ciart Mouse titanium dioxide affects expression ISO Ciart (Rattus norvegicus) 6480464 titanium dioxide affects the expression of CIART mRNA CTD PMID:30012374 Ciart Mouse trametinib multiple interactions ISO CIART (Homo sapiens) 6480464 [sotorasib co-treated with trametinib co-treated with NVP-BKM120] results in decreased expression of CIART mRNA CTD PMID:36139627 Ciart Mouse tributylstannane increases expression EXP 6480464 tributyltin results in increased expression of CIART mRNA CTD PMID:31939706 Ciart Mouse trichloroethene increases expression ISO Ciart (Rattus norvegicus) 6480464 Trichloroethylene results in increased expression of CIART mRNA CTD PMID:33387578 Ciart Mouse Triptolide decreases expression EXP 6480464 triptolide results in decreased expression of CIART mRNA CTD PMID:32835833 Ciart Mouse triptonide decreases expression EXP 6480464 triptonide results in decreased expression of CIART mRNA CTD PMID:33045310 Ciart Mouse troglitazone decreases expression EXP 6480464 troglitazone results in decreased expression of CIART mRNA CTD PMID:28973697 Ciart Mouse valproic acid affects expression ISO CIART (Homo sapiens) 6480464 Valproic Acid affects the expression of CIART mRNA CTD PMID:25979313 Ciart Mouse valproic acid decreases methylation ISO CIART (Homo sapiens) 6480464 Valproic Acid results in decreased methylation of CIART gene CTD PMID:29154799 Ciart Mouse valproic acid decreases expression ISO CIART (Homo sapiens) 6480464 Valproic Acid results in decreased expression of CIART mRNA CTD PMID:23179753 more ... Ciart Mouse valproic acid multiple interactions ISO CIART (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CIART mRNA CTD PMID:27188386 Ciart Mouse valproic acid increases expression ISO Ciart (Rattus norvegicus) 6480464 Valproic Acid results in increased expression of CIART mRNA CTD PMID:29427782
(-)-epigallocatechin 3-gallate (ISO) 17beta-estradiol (EXP) 2,2',4,4',5,5'-hexachlorobiphenyl (EXP) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2-hydroxypropanoic acid (ISO) 4,4'-sulfonyldiphenol (EXP,ISO) ammonium chloride (ISO) antirheumatic drug (ISO) arsenite(3-) (ISO) atrazine (ISO) benzo[a]pyrene (EXP,ISO) benzo[b]fluoranthene (EXP) bis(2-ethylhexyl) phthalate (EXP) bisphenol A (EXP,ISO) bisphenol F (EXP) bromobenzene (ISO) cadmium atom (ISO) cadmium dichloride (ISO) carbamazepine (ISO) carbon nanotube (EXP) chlorpyrifos (EXP) chromium(6+) (ISO) copper(II) sulfate (ISO) cyclosporin A (ISO) dichloroacetic acid (EXP) dimethylarsinic acid (EXP) dioxygen (ISO) dorsomorphin (ISO) doxorubicin (ISO) endosulfan (ISO) entinostat (ISO) epoxiconazole (EXP) flutamide (ISO) furan (ISO) gentamycin (ISO) iron dichloride (ISO) lead(0) (ISO) maneb (EXP) manganese atom (ISO) manganese(0) (ISO) manganese(II) chloride (ISO) methylarsonic acid (EXP) monosodium L-glutamate (EXP) N-methyl-4-phenylpyridinium (ISO) ozone (EXP) paracetamol (ISO) paraquat (EXP,ISO) perfluorooctane-1-sulfonic acid (EXP) potassium chromate (ISO) rac-lactic acid (ISO) rotenone (ISO) SB 431542 (ISO) silicon dioxide (ISO) sodium arsenate (EXP) sodium arsenite (EXP) sotorasib (ISO) temozolomide (ISO) tetrachloroethene (EXP) tetrachloromethane (ISO) tetraphene (EXP) thioacetamide (ISO) titanium dioxide (ISO) trametinib (ISO) tributylstannane (EXP) trichloroethene (ISO) Triptolide (EXP) triptonide (EXP) troglitazone (EXP) valproic acid (ISO)
Ciart Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 95,785,812 - 95,790,012 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 95,785,815 - 95,789,563 (-) Ensembl GRCm39 Ensembl GRCm38 3 95,878,500 - 95,882,257 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 95,878,503 - 95,882,251 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 95,682,428 - 95,686,151 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 95,963,908 - 95,967,633 (-) NCBI MGSCv36 mm8 Celera 3 97,312,032 - 97,315,756 (-) NCBI Celera Cytogenetic Map 3 F2.1 NCBI cM Map 3 41.42 NCBI
CIART Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 150,282,554 - 150,287,093 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 150,282,543 - 150,287,093 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 150,254,964 - 150,259,505 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 148,521,853 - 148,526,125 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 147,068,301 - 147,072,574 NCBI Celera 1 123,370,960 - 123,375,233 (+) NCBI Celera Cytogenetic Map 1 q21.2 NCBI HuRef 1 121,633,885 - 121,638,163 (+) NCBI HuRef CHM1_1 1 151,650,945 - 151,655,215 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 149,407,478 - 149,412,040 (+) NCBI T2T-CHM13v2.0
Ciart Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 186,108,744 - 186,113,778 (-) NCBI GRCr8 mRatBN7.2 2 183,419,819 - 183,424,845 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 183,419,819 - 183,423,313 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 191,084,561 - 191,088,055 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 188,888,111 - 188,891,608 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 183,717,098 - 183,720,592 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 197,987,705 - 197,991,198 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 197,987,705 - 197,991,574 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 217,478,839 - 217,482,049 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 190,659,555 - 190,663,895 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 2 175,949,238 - 175,952,732 (-) NCBI Celera Cytogenetic Map 2 q34 NCBI
Ciart Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955413 490,117 - 494,332 (-) NCBI ChiLan1.0 ChiLan1.0
CIART Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 99,551,579 - 99,556,149 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 99,305,525 - 99,310,122 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 125,627,812 - 125,632,367 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 129,278,742 - 129,283,271 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 129,278,742 - 129,283,271 (+) Ensembl panpan1.1 panPan2
CIART Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 17 59,524,715 - 59,529,535 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 17 59,525,987 - 59,529,402 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 17 58,971,251 - 58,975,921 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 17 60,540,474 - 60,545,124 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 17 60,532,582 - 60,545,108 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 17 59,370,942 - 59,375,587 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 17 59,454,744 - 59,459,367 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 17 60,182,501 - 60,187,143 (+) NCBI UU_Cfam_GSD_1.0
Ciart
CIART Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 4 98,800,931 - 98,804,739 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 4 98,800,849 - 98,809,573 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 4 108,088,573 - 108,093,770 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
CIART Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Vero_WHO_p1.0 NW_023666038 13,005,562 - 13,010,479 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Ciart
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Predicted Target Of
Count of predictions: 932 Count of miRNA genes: 524 Interacting mature miRNAs: 604 Transcripts: ENSMUST00000036418, ENSMUST00000159739, ENSMUST00000159863, ENSMUST00000161866, ENSMUST00000161867, ENSMUST00000161994 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
4142399 Aec1_m autoimmune exocrinopathy 1 (mouse) Not determined 7586174 102690034 Mouse 26884378 Skwq6_m skull length QTL 6, 10 week (mouse) 3 51907421 102307316 Mouse 1301971 Cia5_m collagen induced arthritis QTL 5 (mouse) Not determined 3 66046658 100046795 Mouse 1301392 Eae3_m susceptibility to experimental allergic encephalomyelitis 3 (mouse) Not determined 3 79548730 113548837 Mouse 1301904 Iba2_m induction of brown adipocytes 2 (mouse) Not determined 3 82147043 116147184 Mouse 26884382 Bzwq1_m bi-zygomatic width QTL 1, 5 week (mouse) 3 52207421 137205761 Mouse 11041900 Lmr11a_m leishmaniasis resistance 11a (mouse) 3 83463991 117464137 Mouse 1301398 Rapop3_m radiation-induced apoptosis 3 (mouse) Not determined 3 90511217 100464137 Mouse 26884380 Skwq1_m skull length QTL 1, 5 week (mouse) 3 43954435 101607316 Mouse 14746984 Manh54_m mandible shape 54 (mouse) 3 85289152 119289152 Mouse 12738440 Twq3_m testis weight QTL 3 (mouse) 3 87228015 121228015 Mouse 25314313 Syncl1_m synaptonemal complex length 1 (mouse) 3 67907333 128393649 Mouse 1301272 Cfsw1_m cystic fibrosis survival to weaning 1 (mouse) Not determined 3 83882912 117883044 Mouse 1301791 Char4_m P. chabaudi malaria resistance QTL 4 (mouse) Not determined 3 69625509 100655290 Mouse 11049572 Lmr11c_m leishmaniasis resistance 11c (mouse) 3 72139967 106140094 Mouse 26884436 Zlq3_m zygomatic length QTL 3, 10 week (mouse) 3 3265060 142405761 Mouse 26884427 Cvht4_m cranial vault height 4, 10 week (mouse) 3 16054164 109707316 Mouse 10766455 Sle22_m systematic lupus erythematosus susceptibility 22 (mouse) 3 90376936 124377072 Mouse 14747001 Mancz4_m mandible centroid size 4 (mouse) 3 90378017 124378017 Mouse 1301705 Sles3_m systemic lupus erythmatosus suppressor 3 (mouse) Not determined 3 37174862 143353183 Mouse 13207570 Tcq12_m total cholesterol QTL 12 (mouse) 3 16504164 130163649 Mouse 1357583 Sle18_m systematic lupus erythematosus susceptibility 18 (mouse) Not determined 3 87208904 125316236 Mouse 26884422 Cvht7_m cranial vault height 7, 16 week (mouse) 3 28954149 118893649 Mouse 4142178 Ctrq2_m C. trachomatis resistance QTL 2 (mouse) Not determined 3 89139967 137453008 Mouse 1300595 Tmevd2_m Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse) Not determined 3 75463302 109463549 Mouse 11251721 Ewc3_m ethanol withdrawal and consumption 3 (mouse) 3 69568554 103568554 Mouse 1300982 Lmr11_m leishmaniasis resistance 11 (mouse) Not determined 3 72139967 106140094 Mouse 1301947 Pcfm3_m periosteal circumference and femur length 3 (mouse) Not determined 3 81084652 115084797 Mouse 4142099 Cq3_m cholesterol QTL 3 (mouse) Not determined 3 84888918 118889067 Mouse 11039512 Ltpr3b_m Leishmania tropica response 3b (mouse) 3 83463991 117464137 Mouse 1301349 Pgia26_m proteoglycan induced arthritis 26 (mouse) Not determined 3 92251533 126251650 Mouse 11039519 Ltpr3_m Leishmania tropica response 3 (mouse) 3 56704102 100464137 Mouse 1302052 Etohcta4_m ethanol conditioned taste aversion 4 (mouse) Not determined 3 91000105 125008748 Mouse 1302056 Orgwq4_m organ weight QTL 4 (mouse) Not determined 3 30067588 147304689 Mouse 11039507 Ltpr3g_m Leishmania tropica response 3g (mouse) 3 83463991 117464137 Mouse 11039508 Ltpr3f_m Leishmania tropica response 3f (mouse) 3 83463991 117464137 Mouse 1301422 Sle11_m systematic lupus erythematosus susceptibility 11 (mouse) Not determined 3 70208904 104209042 Mouse 11039509 Ltpr3e_m Leishmania tropica response 3e (mouse) 3 83463991 117464137 Mouse 11039510 Ltpr3d_m Leishmania tropica response 3d (mouse) 3 83463991 117464137 Mouse 13208566 Bmiq5_m body mass index QTL 5 (mouse) 3 40954435 115793649 Mouse 11039511 Ltpr3c_m Leishmania tropica response 3c (mouse) 3 83463991 117464137 Mouse
UniSTS:234757
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 3 95,878,599 - 95,878,852 UniSTS GRCm38 MGSCv37 3 95,682,522 - 95,682,775 UniSTS GRCm37 Celera 3 97,312,127 - 97,312,380 UniSTS Cytogenetic Map 3 F2.1 UniSTS
UniSTS:236488
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 10 128,550,056 - 128,550,264 UniSTS GRCm38 GRCm38 3 95,879,002 - 95,880,469 UniSTS GRCm38 MGSCv37 10 127,987,112 - 127,987,320 UniSTS GRCm37 MGSCv37 3 95,682,925 - 95,684,392 UniSTS GRCm37 Celera 10 130,942,007 - 130,942,215 UniSTS Celera 3 97,312,530 - 97,313,997 UniSTS Cytogenetic Map 10 D3 UniSTS Cytogenetic Map 3 F2.1 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSMUST00000036418 ⟹ ENSMUSP00000049308
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 3 95,785,817 - 95,789,543 (-) Ensembl GRCm38.p6 Ensembl 3 95,878,505 - 95,882,231 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000159739 ⟹ ENSMUSP00000124943
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 3 95,785,815 - 95,789,517 (-) Ensembl GRCm38.p6 Ensembl 3 95,878,503 - 95,882,205 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000159863 ⟹ ENSMUSP00000135522
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 3 95,787,764 - 95,789,515 (-) Ensembl GRCm38.p6 Ensembl 3 95,880,452 - 95,882,203 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000161866 ⟹ ENSMUSP00000135072
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 3 95,786,116 - 95,789,563 (-) Ensembl GRCm38.p6 Ensembl 3 95,878,804 - 95,882,251 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000161867 ⟹ ENSMUSP00000124831
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 3 95,786,822 - 95,788,558 (-) Ensembl GRCm38.p6 Ensembl 3 95,879,510 - 95,881,246 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000161994 ⟹ ENSMUSP00000124125
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 3 95,787,985 - 95,789,386 (-) Ensembl GRCm38.p6 Ensembl 3 95,880,673 - 95,882,074 (-) Ensembl
RefSeq Acc Id:
NM_001033302 ⟹ NP_001028474
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI GRCm38 3 95,878,505 - 95,882,228 (-) NCBI MGSCv37 3 95,682,428 - 95,686,151 (-) RGD Celera 3 97,312,032 - 97,315,756 (-) RGD cM Map 3 ENTREZGENE
Sequence:
GGAGGTGGGTCGGCTAGACCAGCACAGACAGTGAAGAAGCTGCATACCGACCGGGGCTGAACCGACAGACCCAGTTGCAGGTTCTGATCTTTGGTACTACGGGAGCTGCTCTTCAGCCCCTCTCCTGC
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RefSeq Acc Id:
NM_001411319 ⟹ NP_001398248
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411320 ⟹ NP_001398249
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,790,012 (-) NCBI
RefSeq Acc Id:
NM_001411321 ⟹ NP_001398250
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411322 ⟹ NP_001398251
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,790,012 (-) NCBI
RefSeq Acc Id:
NM_001411323 ⟹ NP_001398252
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411324 ⟹ NP_001398253
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411325 ⟹ NP_001398254
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411326 ⟹ NP_001398255
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411327 ⟹ NP_001398256
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411328 ⟹ NP_001398257
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,785,812 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411329 ⟹ NP_001398258
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,786,824 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NM_001411330 ⟹ NP_001398259
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 95,786,824 - 95,789,517 (-) NCBI
RefSeq Acc Id:
NP_001028474 ⟸ NM_001033302
- Peptide Label:
isoform 1
- UniProtKB:
Q3U1B8 (UniProtKB/Swiss-Prot), Q3TQ03 (UniProtKB/Swiss-Prot), A2RTE4 (UniProtKB/TrEMBL)
- Sequence:
MDSPSSVSSYSSSSLSPSFSTSSVNSDFSFPSDNEREGKGTHELRPDTVGQRGGSRPSPGPIRCRHRPRVSSNQHTAPHLEQQGSEVKRSRDGEQETSLNTQGCTTEGDLLFAQKCKELQGFIRPLTD
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Ensembl Acc Id:
ENSMUSP00000135522 ⟸ ENSMUST00000159863
Ensembl Acc Id:
ENSMUSP00000124943 ⟸ ENSMUST00000159739
Ensembl Acc Id:
ENSMUSP00000049308 ⟸ ENSMUST00000036418
Ensembl Acc Id:
ENSMUSP00000124831 ⟸ ENSMUST00000161867
Ensembl Acc Id:
ENSMUSP00000135072 ⟸ ENSMUST00000161866
Ensembl Acc Id:
ENSMUSP00000124125 ⟸ ENSMUST00000161994
RefSeq Acc Id:
NP_001398251 ⟸ NM_001411322
- Peptide Label:
isoform 1
- UniProtKB:
Q3TQ03 (UniProtKB/Swiss-Prot), Q3U1B8 (UniProtKB/Swiss-Prot), A2RTE4 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001398249 ⟸ NM_001411320
- Peptide Label:
isoform 1
- UniProtKB:
Q3TQ03 (UniProtKB/Swiss-Prot), Q3U1B8 (UniProtKB/Swiss-Prot), A2RTE4 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001398256 ⟸ NM_001411327
- Peptide Label:
isoform 2
RefSeq Acc Id:
NP_001398255 ⟸ NM_001411326
- Peptide Label:
isoform 2
RefSeq Acc Id:
NP_001398257 ⟸ NM_001411328
- Peptide Label:
isoform 2
RefSeq Acc Id:
NP_001398250 ⟸ NM_001411321
- Peptide Label:
isoform 1
- UniProtKB:
Q3TQ03 (UniProtKB/Swiss-Prot), Q3U1B8 (UniProtKB/Swiss-Prot), A2RTE4 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001398248 ⟸ NM_001411319
- Peptide Label:
isoform 1
- UniProtKB:
Q3TQ03 (UniProtKB/Swiss-Prot), Q3U1B8 (UniProtKB/Swiss-Prot), A2RTE4 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001398254 ⟸ NM_001411325
- Peptide Label:
isoform 2
RefSeq Acc Id:
NP_001398253 ⟸ NM_001411324
- Peptide Label:
isoform 2
RefSeq Acc Id:
NP_001398252 ⟸ NM_001411323
- Peptide Label:
isoform 1
- UniProtKB:
Q3TQ03 (UniProtKB/Swiss-Prot), Q3U1B8 (UniProtKB/Swiss-Prot), A2RTE4 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001398259 ⟸ NM_001411330
- Peptide Label:
isoform 3
RefSeq Acc Id:
NP_001398258 ⟸ NM_001411329
- Peptide Label:
isoform 3
RGD ID: 6833840 Promoter ID: MM_KWN:35336 Type: CpG-Island SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6 Transcripts: OTTMUST00000075664, OTTMUST00000075670, OTTMUST00000075671, OTTMUST00000075672, OTTMUST00000075673, OTTMUST00000075674 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 3 95,686,106 - 95,686,627 (-) MPROMDB
RGD ID: 6881618 Promoter ID: EPDNEW_M4260 Type: multiple initiation site Name: Ciart_1 Description: Mus musculus circadian associated repressor of transcription, mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 3 95,882,205 - 95,882,265 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2014-03-05
Ciart
circadian associated repressor of transcription
Gm129
predicted gene 129
Symbol and/or name change
5135510 APPROVED
