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Gene: ZMAT5 (zinc finger matrin-type 5) Homo sapiens
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Symbol: ZMAT5
Name: zinc finger matrin-type 5
Description: Predicted to have zinc ion binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Localizes to U12-type spliceosomal complex and nucleoplasm; INTERACTS WITH 3-isobutyl-1-methyl-7H-xanthine; aflatoxin B1; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: SNRNP20; U11/U12 small nuclear ribonucleoprotein 20 kDa protein; U11/U12 snRNP 20 kDa protein; U11/U12 snRNP 20K; U11/U12-20K; ZC3H19; zinc finger CCCH-type containing 19; zinc finger matrin-type protein 5; zinc finger, matrin type 5; zinc finger, matrin-type 5
Orthologs:
Mus musculus (house mouse) : Zmat5 (zinc finger, matrin type 5)  MGI  Alliance
Rattus norvegicus (Norway rat) : Zmat5 (zinc finger, matrin type 5)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zmat5 (zinc finger matrin-type 5)
Pan paniscus (bonobo/pygmy chimpanzee) : ZMAT5 (zinc finger matrin-type 5)
Canis lupus familiaris (dog) : ZMAT5 (zinc finger matrin-type 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zmat5 (zinc finger matrin-type 5)
Sus scrofa (pig) : ZMAT5 (zinc finger matrin-type 5)
Chlorocebus sabaeus (African green monkey) : ZMAT5 (zinc finger matrin-type 5)
Heterocephalus glaber (naked mole-rat) : Zmat5 (zinc finger matrin-type 5)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2229,730,956 - 29,767,011 (-)EnsemblGRCh38hg38GRCh38
GRCh382229,730,956 - 29,767,011 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372230,126,945 - 30,163,000 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362228,456,945 - 28,492,969 (-)NCBINCBI36hg18NCBI36
Celera2213,926,672 - 13,962,699 (-)NCBI
Cytogenetic Map22q12.2NCBI
HuRef2213,090,579 - 13,126,584 (-)NCBIHuRef
CHM1_12230,086,138 - 30,122,185 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on ZMAT5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1607019
Created: 2007-04-29
Species: Homo sapiens
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.