Symbol:
LHX8
Name:
LIM homeobox 8
RGD ID:
1606630
HGNC Page
HGNC:28838
Description:
Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in forebrain neuron development and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including female gonad development; forebrain neuron differentiation; and odontogenesis of dentin-containing tooth. Predicted to be located in chromatin. Predicted to be active in nucleus.
Type:
protein-coding
RefSeq Status:
REVIEWED
Previously known as:
Lhx7; LIM homeobox protein 8; LIM-homeodomain protein Lhx8; LIM/homeobox protein Lhx8
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Mus musculus (house mouse):
Lhx8 (LIM homeobox protein 8)
HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):
Lhx8 (LIM homeobox 8)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Chinchilla lanigera (long-tailed chinchilla):
Lhx8 (LIM homeobox 8)
NCBI
Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):
LHX8 (LIM homeobox 8)
NCBI
Ortholog
Canis lupus familiaris (dog):
LHX8 (LIM homeobox 8)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Lhx8 (LIM homeobox 8)
NCBI
Ortholog
Sus scrofa (pig):
LHX8 (LIM homeobox 8)
HGNC
EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Chlorocebus sabaeus (green monkey):
LHX8 (LIM homeobox 8)
NCBI
Ortholog
Heterocephalus glaber (naked mole-rat):
Lhx8 (LIM homeobox 8)
NCBI
Ortholog
Alliance orthologs 3
Rattus norvegicus (Norway rat):
Lhx8 (LIM homeobox 8)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Lhx8 (LIM homeobox protein 8)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
lhx8a (LIM homeobox 8a)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid|ZFIN)
Drosophila melanogaster (fruit fly):
Awh
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
lim-4
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
lhx8
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB)
Xenopus laevis (African clawed frog):
lhx8.S
Alliance
DIOPT (Xenbase)
Xenopus laevis (African clawed frog):
lhx8.L
Alliance
DIOPT (Xenbase)
Allele / Splice:
See ClinVar data
Latest Assembly:
GRCh38 - Human Genome Assembly GRCh38
Position:
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 75,128,434 - 75,199,454 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 75,128,434 - 75,161,533 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 75,594,119 - 75,627,218 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 75,366,707 - 75,399,806 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 1 73,839,451 - 73,872,551 (+) NCBI Celera Cytogenetic Map 1 p31.1 NCBI HuRef 1 73,728,993 - 73,762,092 (+) NCBI HuRef CHM1_1 1 75,709,516 - 75,742,604 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 74,970,280 - 75,041,301 (+) NCBI T2T-CHM13v2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
1-naphthyl isothiocyanate (ISO) 17beta-estradiol (ISO) 17beta-estradiol 3-benzoate (ISO) 2,3',4,4',5-Pentachlorobiphenyl (ISO) 2,3,7,8-tetrachlorodibenzodioxine (ISO) 3-chloropropane-1,2-diol (ISO) 4,4'-diaminodiphenylmethane (ISO) 6-propyl-2-thiouracil (ISO) acetamide (ISO) aflatoxin B1 (EXP) all-trans-retinoic acid (EXP,ISO) alpha-Zearalanol (ISO) ammonium chloride (ISO) amosite asbestos (EXP) arsane (EXP) arsenic atom (EXP) arsenite(3-) (EXP) belinostat (EXP) benzo[a]pyrene (EXP,ISO) bis(2-chloroethyl) sulfide (ISO) bis(2-ethylhexyl) phthalate (ISO) bisphenol A (ISO) butanal (EXP) CGP 52608 (EXP) chlorpyrifos (ISO) choline (ISO) cisplatin (EXP) crocidolite asbestos (EXP) cyclosporin A (EXP) dorsomorphin (EXP) endosulfan (ISO) entinostat (EXP) ethanol (ISO) folic acid (ISO) furan (ISO) indole-3-methanol (ISO) L-methionine (ISO) leflunomide (ISO) mercury dibromide (EXP) methoxychlor (ISO) N-acetyl-L-cysteine (ISO) N-nitrosodiethylamine (ISO) orphenadrine (ISO) p-chloromercuribenzoic acid (EXP) panobinostat (EXP) pentanal (EXP) perfluorohexanesulfonic acid (ISO) phenobarbital (ISO) propanal (EXP) SB 431542 (EXP) serpentine asbestos (EXP) sunitinib (EXP) testosterone (ISO) thioacetamide (ISO) titanium dioxide (ISO) trichostatin A (EXP) triclosan (EXP) trimellitic anhydride (ISO) valproic acid (EXP) zearalenone (ISO)
LHX8 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 75,128,434 - 75,199,454 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 75,128,434 - 75,161,533 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 75,594,119 - 75,627,218 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 75,366,707 - 75,399,806 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 1 73,839,451 - 73,872,551 (+) NCBI Celera Cytogenetic Map 1 p31.1 NCBI HuRef 1 73,728,993 - 73,762,092 (+) NCBI HuRef CHM1_1 1 75,709,516 - 75,742,604 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 74,970,280 - 75,041,301 (+) NCBI T2T-CHM13v2.0
Lhx8 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 154,011,925 - 154,036,190 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 154,011,931 - 154,036,296 (-) Ensembl GRCm39 Ensembl GRCm38 3 154,306,288 - 154,330,560 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 154,306,294 - 154,330,659 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 153,969,257 - 153,993,524 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 154,242,163 - 154,265,944 (-) NCBI MGSCv36 mm8 Celera 3 160,766,458 - 160,790,689 (-) NCBI Celera Cytogenetic Map 3 H4 NCBI cM Map 3 79.12 NCBI
Lhx8 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 245,904,712 - 245,929,376 (-) NCBI GRCr8 mRatBN7.2 2 243,244,958 - 243,269,624 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 243,244,961 - 243,269,416 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 251,069,403 - 251,090,965 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 248,963,243 - 248,984,805 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 243,862,639 - 243,884,232 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 260,572,205 - 260,598,744 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 260,574,190 - 260,596,777 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 279,235,991 - 279,260,188 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 252,216,608 - 252,239,112 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 2 252,231,217 - 252,253,719 (-) NCBI Celera 2 235,171,406 - 235,193,860 (-) NCBI Celera Cytogenetic Map 2 q45 NCBI
Lhx8 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955423 17,644,871 - 17,668,781 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955423 17,644,691 - 17,668,969 (-) NCBI ChiLan1.0 ChiLan1.0
LHX8 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 151,724,416 - 151,752,072 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 150,884,884 - 150,912,497 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 74,356,372 - 74,383,984 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 76,324,804 - 76,357,879 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 76,324,804 - 76,357,879 (+) Ensembl panpan1.1 panPan2
LHX8 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 71,329,711 - 71,355,851 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 71,329,820 - 71,352,945 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 73,992,529 - 74,018,201 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 71,921,509 - 71,947,201 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 71,920,999 - 71,947,701 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 71,416,782 - 71,442,453 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 71,362,129 - 71,387,952 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 71,856,878 - 71,882,562 (-) NCBI UU_Cfam_GSD_1.0
Lhx8 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405058 86,811,952 - 86,842,076 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936571 2,326,920 - 2,351,779 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936571 2,326,851 - 2,352,428 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
LHX8 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 138,074,855 - 138,099,810 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 6 138,074,673 - 138,102,025 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 128,034,492 - 128,061,739 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
LHX8 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 58,016,078 - 58,043,651 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 58,017,298 - 58,041,479 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666033 59,429,912 - 59,454,728 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Lhx8 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 675 Count of miRNA genes: 265 Interacting mature miRNAs: 308 Transcripts: ENST00000294638, ENST00000356261, ENST00000559413, ENST00000607240 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1578620 LDLPS20_H Low density lipoprotein particle size QTL 21 (human) 2.04 0.00046 LDL particle size 1 52531105 78531105 Human 597329746 GWAS1425820_H neuroticism measurement, cognitive function measurement QTL GWAS1425820 (human) 2e-14 cognitive behavior trait (VT:0010450) 1 75180787 75180788 Human 597188691 GWAS1284765_H nonanoylcarnitine (C9) measurement QTL GWAS1284765 (human) 9e-12 nonanoylcarnitine (C9) measurement 1 75139308 75139309 Human 1578602 LDLPS21_H Low density lipoprotein particle size QTL 21 (human) 2.05 0.00037 LDL particle size 1 52531105 78531105 Human 597225356 GWAS1321430_H self reported educational attainment QTL GWAS1321430 (human) 2e-09 self reported educational attainment 1 75150877 75150878 Human 597225357 GWAS1321431_H self reported educational attainment QTL GWAS1321431 (human) 2e-12 self reported educational attainment 1 75180787 75180788 Human 597205582 GWAS1301656_H generalized anxiety disorder QTL GWAS1301656 (human) 4e-08 generalized anxiety disorder 1 75129466 75129467 Human 597183790 GWAS1279864_H hexanoylcarnitine measurement QTL GWAS1279864 (human) 2e-16 hexanoylcarnitine measurement 1 75139308 75139309 Human 597526954 GWAS1623028_H diverticulitis QTL GWAS1623028 (human) 0.0000002 diverticulitis 1 75159713 75159714 Human 2316890 GLUCO302_H Glucose level QTL 302 (human) 0.005 Glucose level 1 68532992 94532992 Human 2289499 BW445_H Body weight QTL 445 (human) 2.26 Body morphometry waist to hip ratio 1 68532992 94532992 Human 1578594 LDLPS19_H Low density lipoprotein particle size QTL 19 (human) 2.56 0.00009 LDL particle size 1 52531105 78531105 Human 597186114 GWAS1282188_H octanoylcarnitine measurement QTL GWAS1282188 (human) 1e-14 octanoylcarnitine measurement 1 75139308 75139309 Human 1581539 BP75_H Blood pressure QTL 75 (human) 2.4 0.001 Blood pressure pulse pressure 1 68532992 94532992 Human 2292793 PRSTS24_H Prostate tumor susceptibility QTL 24 (human) Prostate tumor susceptibility late onset 1 68532992 94532992 Human
SHGC-149363
Human Assembly Chr Position (strand) Source JBrowse GRCh37 1 75,601,032 - 75,601,337 UniSTS GRCh37 Build 36 1 75,373,620 - 75,373,925 RGD NCBI36 Celera 1 73,846,364 - 73,846,669 RGD Cytogenetic Map 1 p31.1 UniSTS HuRef 1 73,735,910 - 73,736,215 UniSTS TNG Radiation Hybrid Map 1 41017.0 UniSTS
SHGC-6203
Human Assembly Chr Position (strand) Source JBrowse GRCh37 1 75,615,914 - 75,616,018 UniSTS GRCh37 Build 36 1 75,388,502 - 75,388,606 RGD NCBI36 Celera 1 73,861,247 - 73,861,351 RGD Cytogenetic Map 1 p31.1 UniSTS HuRef 1 73,750,789 - 73,750,893 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
entire extraembryonic component
157
517
342
316
1694
865
979
2
186
159
25
427
774
915
18
1453
165
784
900
162
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENST00000294638 ⟹ ENSP00000294638
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 75,128,434 - 75,161,533 (+) Ensembl
Ensembl Acc Id:
ENST00000356261 ⟹ ENSP00000348597
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 75,134,388 - 75,161,533 (+) Ensembl
Ensembl Acc Id:
ENST00000607240
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 75,159,288 - 75,161,531 (+) Ensembl
Ensembl Acc Id:
ENST00000696555 ⟹ ENSP00000512714
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 1 75,134,388 - 75,161,533 (+) Ensembl
RefSeq Acc Id:
NM_001001933 ⟹ NP_001001933
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 75,128,434 - 75,161,533 (+) NCBI GRCh37 1 75,594,119 - 75,627,218 (+) RGD Build 36 1 75,366,707 - 75,399,806 (+) NCBI Archive Celera 1 73,839,451 - 73,872,551 (+) RGD HuRef 1 73,728,993 - 73,762,092 (+) ENTREZGENE CHM1_1 1 75,709,516 - 75,742,604 (+) NCBI T2T-CHM13v2.0 1 74,970,280 - 75,003,384 (+) NCBI
Sequence:
AGAGGCAAGAGGCTAGCGGCTGGACCACTTGTGCTGGAGTGGTAAAGAACTATCATGAATCCATTTACTGAAAGTGTCCATTTCTGAACTCACCCTAAAGAGGACAAACACCGCAAAGTAGTTAAAAG TCAGGCATTCGCGTCGGACGTCTGGGTTTGAATTCTGCCCTGGCTTGACTGGAAACGCTTCCCCTATTTCTTCCGTAGCGGACCGGGAGAGCTTACTGGCGCTCTGCGAACCGGCTGGAAAGAAACAC CGAGTCACTCGTACAGACTCTTGGTCGCAGAACTTGGCTTTCCGCTATTGGTCCTCCAGAACCGCTTGAAACAACTGGCCCCAGCTGGCGCATCAGACCGCAGTGAGGAATGCCGCGGGGCGGGTGGC GAAGGCAGGGTCTGCCCGCCAGTGGATTCCCGGGTGTCCCGCGTGGAGCAGGCTTGCCCAGCTGGGAAGCCCATCAAACCTCAGTCTTGGCCCACAGTGGGAGAGAGACCAGTGGGTCCCAGACGGAG GCCCTCGCCCGCTTTTGGCGACCTCCACTGGCGTGAATAAAAGCACCCCTCTCTTACCCTCAGAAACTGTGGGTAGCAAGGTATAAAACGGAGTCTGGGACCGGTAAGTCCCAAGGTGAGCCCGTATA CAGCTCTGCCATCTCTGAGGGGTTATGCAGATTCTGAGCAGGTGTCAGGGGCTCATGTCAGAGGAGTGCGGGCGGACTACAGCCCTGGCGGCCGGGAGGACTCGCAAAGGCGCCGGGGAAGAGGGACT GGTGAGCCCCGAGGGAGCGGGGGACGAGGACTCGTGCTCCTCCTCGGCCCCGCTGTCCCCGTCGTCCTCGCCCCGGTCCATGGCCTCGGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTGCAACAGTT GCGGCCTGGAGATCGTGGACAAATACCTTCTCAAGGTGAATGACCTATGCTGGCATGTCCGGTGTCTCTCCTGCAGTGTTTGCAGAACCTCCCTAGGAAGGCACACCAGCTGTTATATTAAAGACAAA GACATTTTCTGCAAACTTGATTATTTCAGAAGGTATGGAACTCGCTGCTCTCGATGTGGGAGACACATCCATTCTACTGACTGGGTCCGGAGAGCCAAGGGGAATGTCTATCACTTGGCATGCTTTGC CTGCTTTTCCTGCAAAAGGCAACTTTCCACAGGAGAGGAGTTTGCTTTGGTGGAAGAGAAAGTCCTCTGCAGAGTACATTATGACTGCATGCTGGATAATTTAAAAAGAGAAGTAGAAAATGGGAATG GGATTAGTGTGGAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTACAGCAGATCAGCTTCAGGTTATGCAAGCACAATTTGCTCAGGACAAC AACCCAGATGCACAGACACTCCAGAAATTGGCAGAAAGGACAGGCTTGAGCAGACGTGTGATACAGGTGTGGTTTCAGAATTGTAGAGCACGCCACAAGAAACACGTCAGTCCTAATCACTCATCCTC CACCCCAGTCACAGCAGTCCCACCCTCCAGGCTGTCTCCACCCATGTTAGAAGAAATGGCTTATTCTGCCTACGTGCCCCAAGATGGAACGATGTTAACTGCGCTGCATAGTTATATGGATGCTCATT CACCAACAACTCTTGGACTCCAGCCCTTGTTACCCCATTCAATGACACAACTGCCAATAAGTCATACCTAATTCTTTTTTCAGGGATAGACTTGATTAAGGATATAAATTTGTCATTTATTATGTATA AAATACCATTGAAAAGATATTACTGTTAATTTTTTATTTAACACCTAAAGCATTTCCAACATCACTTTGCTGCCCAGGTATGTATCTATAGTTGGCCTGCAAGACACTTTTATTAATTCTTCATTTTT TGTAAAACTTATGTTTACAAGAAGAAAACAAATCAAAACATTTTTTGTATTGTCTGGAAATAGTTCACTCTAGTGTGTATCTGTTAATTTATTTGTCATCAAAAGAGCACTTTGCCTAAAAGAAAGGA CTGACAAGTGTGCAAAATGTTTACAATCTTTTGTGAAATTGTAGTTTATCATTAGTTTGTATCTGTAAGTTATTGTAATAAATATTACCTGTATTTTTTGTTATATACAACTTTATACTTTGAAGCTT GTATCTGTGAATTTGCAACTGAAATTTATTTTGCCAATGTTTTCTGAATGAACTGAATAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGATGAATTATGGCTGTAAAT AACACTATAGTTTAATAAGCCCACCATTCTGAGTTTATTAAACATTTTCCATTCTTGTGAAAATTTCAAAAAAAAAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
NM_001256114 ⟹ NP_001243043
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 75,134,388 - 75,161,533 (+) NCBI GRCh37 1 75,594,119 - 75,627,218 (+) NCBI HuRef 1 73,728,993 - 73,762,092 (+) NCBI CHM1_1 1 75,715,964 - 75,742,604 (+) NCBI T2T-CHM13v2.0 1 74,976,238 - 75,003,384 (+) NCBI
Sequence:
AGTGCTCACTTCACTCAGAGCTCAGTGAAGCTGGGAAAGGAATTTTAAGAACGGTTCATCAGAAAGTGGTCAGGCCACAGCGGCCTCTTTGGACGAAGACACACTTGTAGCATTATCCTTCTCGGCAT CAGCTTTTATTAGTGGATCGGGGCGGGGGAGGGGGGAGATCGGCAGACACGGACAGCCTCTGACCCTCTGGAGTTGGTATGTGATAAGCAGCCCTAGCAGTGCCATGTATTGGAAGAACGATCAGATG TTTGTGTGTAAACTAGTAGCAAAGGACGTGCCGGAGCTGGCAGTTCCCCCTGAGAAGGTGAGCGAGCCGACGCCTGGCCAGACCAGCTGAATCGCAGTGTCCTTGAAACTCGAGTTGTTTGGGCTCCT AAACAAGGTTCAGAAACTACCTGTAACGGCCTCATCTTCAGACCTGGCAATTTTTTTTTTTTATTACGTAGTAGCGTTAGTCAGTAATCATTGCACTCCCTCCCCAAAAGCTCACTTAACCTGAGACA TGGAGACTGTAATTTGGGAGATGAAGCCTCGAGCCTAAGGCGCTCTCAGGTCCATTGTCAGGGGCTCATGTCAGAGGAGTGCGGGCGGACTACAGCCCTGGCGGCCGGGAGGACTCGCAAAGGCGCCG GGGAAGAGGGACTGGTGAGCCCCGAGGGAGCGGGGGACGAGGACTCGTGCTCCTCCTCGGCCCCGCTGTCCCCGTCGTCCTCGCCCCGGTCCATGGCCTCGGGCTCCGGCTGCCCTCCTGGCAAGTGT GTGTGCAACAGTTGCGGCCTGGAGATCGTGGACAAATACCTTCTCAAGGTGAATGACCTATGCTGGCATGTCCGGTGTCTCTCCTGCAGTGTTTGCAGAACCTCCCTAGGAAGGCACACCAGCTGTTA TATTAAAGACAAAGACATTTTCTGCAAACTTGATTATTTCAGAAGGTATGGAACTCGCTGCTCTCGATGTGGGAGACACATCCATTCTACTGACTGGGTCCGGAGAGCCAAGGGGAATGTCTATCACT TGGCATGCTTTGCCTGCTTTTCCTGCAAAAGGCAACTTTCCACAGGAGAGGAGTTTGCTTTGGTGGAAGAGAAAGTCCTCTGCAGAGTACATTATGACTGCATGCTGGATAATTTAAAAAGAGAAGTA GAAAATGGGAATGGGATTAGTGTGGAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTACAGCAGATCAGCTTCAGGTTATGCAAGCACAATT TGCTCAGGACAACAACCCAGATGCACAGACACTCCAGAAATTGGCAGAAAGGACAGGCTTGAGCAGACGTGTGATACAGGTGTGGTTTCAGAATTGTAGAGCACGCCACAAGAAACACGTCAGTCCTA ATCACTCATCCTCCACCCCAGTCACAGCAGTCCCACCCTCCAGGCTGTCTCCACCCATGTTAGAAGAAATGGCTTATTCTGCCTACGTGCCCCAAGATGGAACGATGTTAACTGCGCTGCATAGTTAT ATGGATGCTCATTCACCAACAACTCTTGGACTCCAGCCCTTGTTACCCCATTCAATGACACAACTGCCAATAAGTCATACCTAATTCTTTTTTCAGGGATAGACTTGATTAAGGATATAAATTTGTCA TTTATTATGTATAAAATACCATTGAAAAGATATTACTGTTAATTTTTTATTTAACACCTAAAGCATTTCCAACATCACTTTGCTGCCCAGGTATGTATCTATAGTTGGCCTGCAAGACACTTTTATTA ATTCTTCATTTTTTGTAAAACTTATGTTTACAAGAAGAAAACAAATCAAAACATTTTTTGTATTGTCTGGAAATAGTTCACTCTAGTGTGTATCTGTTAATTTATTTGTCATCAAAAGAGCACTTTGC CTAAAAGAAAGGACTGACAAGTGTGCAAAATGTTTACAATCTTTTGTGAAATTGTAGTTTATCATTAGTTTGTATCTGTAAGTTATTGTAATAAATATTACCTGTATTTTTTGTTATATACAACTTTA TACTTTGAAGCTTGTATCTGTGAATTTGCAACTGAAATTTATTTTGCCAATGTTTTCTGAATGAACTGAATAAAGCTTCTGTTGTAGCATGCCATGCAAACACATTATTGTGTTTGTGGTTGATGAAT TATGGCTGTAAATAACACTATAGTTTAATAAGCCCACCATTCTGAGTTTATTAAACATTTTCCATTCTTGTGAAAATTTCAA
hide sequence
RefSeq Acc Id:
XM_017001316 ⟹ XP_016856805
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 75,134,388 - 75,199,454 (+) NCBI
Sequence:
TCACTTCACTCAGAGCTCAGTGAAGCTGGGAAAGGAATTTTAAGAACGGTTCATCAGAAAGTGGTCAGGCCACAGCGGCCTCTTTGGACGAAGACACACTTGTAGCATTATCCTTCTCGGCATCAGCT TTTATTAGTGGATCGGGGCGGGGGAGGGGGGAGATCGGCAGACACGGACAGCCTCTGACCCTCTGGAGTTGGTATGTGATAAGCAGCCCTAGCAGTGCCATGTATTGGAAGAACGATCAGATGTTTGT GTGTAAACTAGTAGCAAAGGACGTGCCGGAGCTGGCAGTTCCCCCTGAGAAGGTGAGCGAGCCGACGCCTGGCCAGACCAGCTGAATCGCAGTGTCCTTGAAACTCGAGTTGTTTGGGCTCCTAAACA AGGTTCAGAAACTACCTGTAACGGCCTCATCTTCAGACCTGGCAATTTTTTTTTTTTATTACGTAGTAGCGTTAGTCAGTAATCATTGCACTCCCTCCCCAAAAGCTCACTTAACCTGAGACATGGAG ACTGTAATTTGGGAGATGAAGCCTCGAGCCTAAGGCGCTCTCAGGTCCATTGTCAGGGGCTCATGTCAGAGGAGTGCGGGCGGACTACAGCCCTGGCGGCCGGGAGGACTCGCAAAGGCGCCGGGGAA GAGGGACTGGTGAGCCCCGAGGGAGCGGGGGACGAGGACTCGTGCTCCTCCTCGGCCCCGCTGTCCCCGTCGTCCTCGCCCCGGTCCATGGCCTCGGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTG CAACAGTTGCGGCCTGGAGATCGTGGACAAATACCTTCTCAAGGTGAATGACCTATGCTGGCATGTCCGGTGTCTCTCCTGCAGTGTTTGCAGAACCTCCCTAGGAAGGCACACCAGCTGTTATATTA AAGACAAAGACATTTTCTGCAAACTTGATTATTTCAGAAGGTATGGAACTCGCTGCTCTCGATGTGGGAGACACATCCATTCTACTGACTGGGTCCGGAGAGCCAAGGGGAATGTCTATCACTTGGCA TGCTTTGCCTGCTTTTCCTGCAAAAGGCAACTTTCCACAGGAGAGGAGTTTGCTTTGGTGGAAGAGAAAGTCCTCTGCAGAGTACATTATGACTGCATGCTGGATAATTTAAAAAGAGAAGTAGAAAA TGGGAATGGGATTAGTGTGGAAGGTGCCCTCCTCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTACAGCAGATCAGCTTCAGGTTATGCAAGCACAATTTGCTC AGGACAACAACCCAGATGCACAGACACTCCAGAAATTGGCAGAAAGGACAGGCTTGAGCAGACGTGTGATACAGGTGTGGTTTCAGAATTGTAGAGCACGCCACAAGAAACACGTCAGTCCTAATCAC TCATCCTCCACCCCAGTCACAGCAGTCCCACCCTCCAGGCTGTCTCCACCCATGTTAGAAGAAATGGCTTATTCTGCCTACGTGCCCCAAGATGGAACGATGTTAACTGCGCTGCATAGTTATATGGA TGACACACATGCAGCCGTGCACATTCATCTGCCTGGAAGAATGTGGAGATTCCAAGGTTATTCTAACAATGGATCAAGTTCAGGCTCCACGTTAATTTGTAAGTACAATGAAAACATCTTTCTCTTTT GATAAACTTTT
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RefSeq Acc Id:
XM_017001317 ⟹ XP_016856806
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 75,136,383 - 75,199,454 (+) NCBI
Sequence:
CCCCGCGCCGAGGCTGGGGCGGGCAGCACGCTCGGAACTTCTGATCTGTTTCTCCATACTTTCT CCCCCTCCTACTCCGCAGTGTCAGGGGCTCATGTCAGAGGAGTGCGGGCGGACTACAGCCCTGGCGGCCGGGAGGACTCGCAAAGGCGCCGGGGAAGAGGGACTGGTGAGCCCCGAGGGAGCGGGGGA CGAGGACTCGTGCTCCTCCTCGGCCCCGCTGTCCCCGTCGTCCTCGCCCCGGTCCATGGCCTCGGGCTCCGGCTGCCCTCCTGGCAAGTGTGTGTGCAACAGTTGCGGCCTGGAGATCGTGGACAAAT ACCTTCTCAAGGTGAATGACCTATGCTGGCATGTCCGGTGTCTCTCCTGCAGTGTTTGCAGAACCTCCCTAGGAAGGCACACCAGCTGTTATATTAAAGACAAAGACATTTTCTGCAAACTTGATTAT TTCAGAAGGTATGGAACTCGCTGCTCTCGATGTGGGAGACACATCCATTCTACTGACTGGGTCCGGAGAGCCAAGGGGAATGTCTATCACTTGGCATGCTTTGCCTGCTTTTCCTGCAAAAGGCAACT TTCCACAGGAGAGGAGTTTGCTTTGGTGGAAGAGAAAGTCCTCTGCAGAGTACATTATGACTGCATGCTGGATAATTTAAAAAGAGAAGTAGAAAATGGGAATGGGATTAGTGTGGAAGGTGCCCTCC TCACAGAGCAAGATGTTAACCATCCAAAACCAGCAAAAAGAGCTCGGACCAGCTTTACAGCAGATCAGCTTCAGGTTATGCAAGCACAATTTGCTCAGGACAACAACCCAGATGCACAGACACTCCAG AAATTGGCAGAAAGGACAGGCTTGAGCAGACGTGTGATACAGGTGTGGTTTCAGAATTGTAGAGCACGCCACAAGAAACACGTCAGTCCTAATCACTCATCCTCCACCCCAGTCACAGCAGTCCCACC CTCCAGGCTGTCTCCACCCATGTTAGAAGAAATGGCTTATTCTGCCTACGTGCCCCAAGATGGAACGATGTTAACTGCGCTGCATAGTTATATGGATGACACACATGCAGCCGTGCACATTCATCTGC CTGGAAGAATGTGGAGATTCCAAGGTTATTCTAACAATGGATCAAGTTCAGGCTCCACGTTAATTTGTAAGTACAATGAAAACATCTTTCTCTTTTGATAAACTTTT
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RefSeq Acc Id:
XM_047421040 ⟹ XP_047276996
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 1 75,136,383 - 75,161,533 (+) NCBI
RefSeq Acc Id:
XM_054336668 ⟹ XP_054192643
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 1 74,976,238 - 75,041,301 (+) NCBI
RefSeq Acc Id:
XM_054336669 ⟹ XP_054192644
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 1 74,978,184 - 75,003,384 (+) NCBI
RefSeq Acc Id:
NP_001001933 ⟸ NM_001001933
- Peptide Label:
isoform 1
- UniProtKB:
E9PGE3 (UniProtKB/Swiss-Prot), Q68G74 (UniProtKB/Swiss-Prot)
- Sequence:
MQILSRCQGLMSEECGRTTALAAGRTRKGAGEEGLVSPEGAGDEDSCSSSAPLSPSSSPRSMASGSGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQ KLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSTPVTAVPPSRLSPPMLEEMAYSAYVPQDGTMLTALHSYMDAHSPTTLGLQPLLPHSMTQLPISHT
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RefSeq Acc Id:
NP_001243043 ⟸ NM_001256114
- Peptide Label:
isoform 2
- UniProtKB:
Q68G74 (UniProtKB/Swiss-Prot)
- Sequence:
MSEECGRTTALAAGRTRKGAGEEGLVSPEGAGDEDSCSSSAPLSPSSSPRSMASGSGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGTRCSR CGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSR RVIQVWFQNCRARHKKHVSPNHSSSTPVTAVPPSRLSPPMLEEMAYSAYVPQDGTMLTALHSYMDAHSPTTLGLQPLLPHSMTQLPISHT
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RefSeq Acc Id:
XP_016856805 ⟸ XM_017001316
- Peptide Label:
isoform X1
- Sequence:
MSEECGRTTALAAGRTRKGAGEEGLVSPEGAGDEDSCSSSAPLSPSSSPRSMASGSGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGTRCSR CGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSR RVIQVWFQNCRARHKKHVSPNHSSSTPVTAVPPSRLSPPMLEEMAYSAYVPQDGTMLTALHSYMDDTHAAVHIHLPGRMWRFQGYSNNGSSSGSTLICKYNENIFLF
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RefSeq Acc Id:
XP_016856806 ⟸ XM_017001317
- Peptide Label:
isoform X1
- Sequence:
MSEECGRTTALAAGRTRKGAGEEGLVSPEGAGDEDSCSSSAPLSPSSSPRSMASGSGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGTRCSR CGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSR RVIQVWFQNCRARHKKHVSPNHSSSTPVTAVPPSRLSPPMLEEMAYSAYVPQDGTMLTALHSYMDDTHAAVHIHLPGRMWRFQGYSNNGSSSGSTLICKYNENIFLF
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Ensembl Acc Id:
ENSP00000294638 ⟸ ENST00000294638
Ensembl Acc Id:
ENSP00000348597 ⟸ ENST00000356261
Ensembl Acc Id:
ENSP00000512714 ⟸ ENST00000696555
RefSeq Acc Id:
XP_047276996 ⟸ XM_047421040
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_054192643 ⟸ XM_054336668
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_054192644 ⟸ XM_054336669
- Peptide Label:
isoform X2