Asnsd1-ps1 (asparagine synthetase domain containing 1, pseudogene 1) - Rat Genome Database

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Gene: Asnsd1-ps1 (asparagine synthetase domain containing 1, pseudogene 1) Rattus norvegicus
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Symbol: Asnsd1-ps1
Name: asparagine synthetase domain containing 1, pseudogene 1
RGD ID: 1592109
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: hypothetical LOC290453; LOC290453
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81588,150,619 - 88,152,531 (+)NCBIGRCr8
mRatBN7.21581,736,087 - 81,737,952 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01589,114,672 - 89,116,568 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01592,606,536 - 92,608,432 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41589,025,684 - 89,027,549 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1580,861,197 - 80,863,093 (+)NCBICelera
Cytogenetic Map15q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Asnsd1-ps1
5 total Variants

1 to 10 of 23 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
731177Uae26Urinary albumin excretion QTL 262.40.025urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1567588667101769107Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)154063126898288169Rat
1576315Schws6Schwannoma susceptibility QTL 60.0069nervous system integrity trait (VT:0010566)post-insult time of death (CMO:0002005)155380615298806152Rat
1549844Bss7Bone structure and strength QTL 76.4femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1575788062101769107Rat
61477Aia4Adjuvant induced arthritis QTL 43joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)155559608991365858Rat
2300326Plaw1Placental weight QTL 1150.005placenta mass (VT:0004257)placenta wet weight (CMO:0002088)1568327165100062518Rat
70182BpQTLcluster12Blood pressure QTL cluster 123.53arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)157369065795018120Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)152788577486257085Rat
70155Gcs1Gastric cancer susceptibility QTL13.8stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)1576306099101769107Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat

1 to 10 of 23 rows
RH133567  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2948,138,753 - 48,138,953 (+)MAPPERmRatBN7.2
mRatBN7.21581,737,740 - 81,737,939 (+)MAPPERmRatBN7.2
Rnor_6.01589,116,357 - 89,116,555NCBIRnor6.0
Rnor_6.0953,008,735 - 53,008,934NCBIRnor6.0
Rnor_5.01592,608,221 - 92,608,419UniSTSRnor5.0
Rnor_5.0952,674,551 - 52,674,750UniSTSRnor5.0
RGSC_v3.41589,027,338 - 89,027,536UniSTSRGSC3.4
RGSC_v3.4945,088,737 - 45,088,936UniSTSRGSC3.4
Celera945,806,063 - 45,806,262UniSTS
Celera1580,862,882 - 80,863,080UniSTS
Cytogenetic Map9q22UniSTS
Cytogenetic Map15q22UniSTS






RefSeq Transcripts XR_146317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_146638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_146317
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.01592,606,567 - 92,608,432 (+)NCBI
RefSeq Acc Id: XR_146638
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1580,861,228 - 80,863,093 (+)NCBI


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-12634 BioCyc
NCBI Gene 290453 ENTREZGENE
PhenoGen Asnsd1-ps1 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Asnsd1-ps1  asparagine synthetase domain containing 1, pseudogene 1  LOC290453  hypothetical LOC290453  Symbol and Name Changed 1299863 APPROVED
2006-11-20 LOC290453  hypothetical LOC290453      Symbol and Name status set to provisional 70820 PROVISIONAL