Atp5po-ps1 (ATP synthase peripheral stalk subunit OSCP, pseudogene 1) - Rat Genome Database

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Gene: Atp5po-ps1 (ATP synthase peripheral stalk subunit OSCP, pseudogene 1) Rattus norvegicus
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Symbol: Atp5po-ps1
Name: ATP synthase peripheral stalk subunit OSCP, pseudogene 1
RGD ID: 1589948
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: hypothetical protein LOC689630; LOC689630
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8539,905,081 - 39,905,715 (-)NCBIGRCr8
mRatBN7.2535,108,280 - 35,108,914 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0535,713,387 - 35,714,021 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0540,368,548 - 40,369,182 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4536,305,207 - 36,305,841 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera534,126,488 - 34,127,122 (-)NCBICelera
Cytogenetic Map5q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Atp5po-ps1
10 total Variants

1 to 10 of 25 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)5894822853948228Rat
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53321566578215665Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5384401847869213Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53321566578215665Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53321566578215665Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)52851548973515489Rat

1 to 10 of 25 rows
RH125676  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2535,108,271 - 35,108,545 (+)MAPPERmRatBN7.2
Rnor_6.0535,713,379 - 35,713,652NCBIRnor6.0
Rnor_5.0540,368,540 - 40,368,813UniSTSRnor5.0
RGSC_v3.4536,305,199 - 36,305,472UniSTSRGSC3.4
Celera534,126,480 - 34,126,753UniSTS
Cytogenetic Map5q21UniSTS






GenBank Nucleotide JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-41825 BioCyc
NCBI Gene 689630 ENTREZGENE
PhenoGen Atp5po-ps1 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Atp5po-ps1  ATP synthase peripheral stalk subunit OSCP, pseudogene 1  LOC689630  hypothetical protein LOC689630  Symbol and Name Changed 1299863 APPROVED
2008-01-09 LOC689630  hypothetical protein LOC689630  LOC681793  hypothetical protein LOC681793  Data merged from RGD:1591613 1643240 APPROVED
2006-11-20 LOC689630  hypothetical protein LOC689630      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC681793  hypothetical protein LOC681793      Symbol and Name status set to provisional 70820 PROVISIONAL