Vom2r-ps91 (vomeronasal 2 receptor, pseudogene 91) - Rat Genome Database

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Gene: Vom2r-ps91 (vomeronasal 2 receptor, pseudogene 91) Rattus norvegicus
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Symbol: Vom2r-ps91
Name: vomeronasal 2 receptor, pseudogene 91
RGD ID: 1588806
Description: INTERACTS WITH methoxychlor
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC688482; similar to putative pheromone receptor (Go-VN3)
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8128,118,078 - 8,190,474 (+)NCBIGRCr8
mRatBN7.2123,320,257 - 3,392,653 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0124,966,271 - 5,053,359 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0127,127,185 - 7,172,787 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.412736,334 - 806,182 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera125,134,081 - 5,204,035 (+)NCBICelera
Cytogenetic Map12p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Vom2r-ps91Ratmethoxychlor affects methylationEXP 6480464Methoxychlor affects the methylation of VOM2R-PS91 geneCTDPMID:35440735

PMID:15057822   PMID:17382427  



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Variants in Vom2r-ps91
364 total Variants

1 to 10 of 20 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12136247923Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat

1 to 10 of 20 rows





RefSeq Transcripts XR_589757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_595274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_589757
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera125,134,081 - 5,204,035 (+)NCBI
RefSeq Acc Id: XR_595274
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0124,966,271 - 5,053,359 (+)NCBI


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-20326 BioCyc
NCBI Gene 688482 ENTREZGENE
PhenoGen Vom2r-ps91 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-05-24 Vom2r-ps91  vomeronasal 2 receptor, pseudogene 91  LOC683499  similar to putative pheromone receptor (Go-VN3)  Data merged from RGD:1586792 1643240 APPROVED
2008-07-23 Vom2r-ps91  vomeronasal 2 receptor, pseudogene 91  LOC688482  similar to putative pheromone receptor (Go-VN3)  Symbol and Name updated 1299863 APPROVED
2006-11-19 LOC688482  similar to putative pheromone receptor (Go-VN3)      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC683499  similar to putative pheromone receptor (Go-VN3)      Symbol and Name status set to provisional 70820 PROVISIONAL