Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Snapc5 (small nuclear RNA activating complex, polypeptide 5) Rattus norvegicus
Analyze
Symbol: Snapc5
Name: small nuclear RNA activating complex, polypeptide 5
Description: Predicted to have DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription, DNA-templated; transcription by RNA polymerase II; and transcription initiation from RNA polymerase III promoter. Predicted to localize to the nuclear body and nucleolus. Orthologous to human SNAPC5 (small nuclear RNA activating complex polypeptide 5); PARTICIPATES IN RNA polymerase III transcription pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC691501; similar to small nuclear RNA activating complex, polypeptide 5; snRNA-activating protein complex subunit 5
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0869,127,708 - 69,131,539 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0868,833,944 - 68,837,775 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4868,372,827 - 68,375,880 (+)NCBIRGSC3.4rn4RGSC3.4
Celera864,083,944 - 64,087,509 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snapc5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1582813
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.