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Gene: Obi1 (ORC ubiquitin ligase 1) Rattus norvegicus
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Symbol: Obi1
Name: ORC ubiquitin ligase 1
Description: Predicted to have chromatin binding activity and ubiquitin-protein transferase activity. Predicted to be involved in positive regulation of mRNA splicing, via spliceosome; protein ubiquitination; and regulation of DNA replication. Predicted to localize to the chromatin. Orthologous to human OBI1 (ORC ubiquitin ligase 1); INTERACTS WITH bisphenol A; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog); 2,2',5,5'-tetrachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC361088; RGD1564706; ring finger protein 219; Rnf219; similar to chromosome 13 open reading frame 7
Orthologs:
Homo sapiens (human) : OBI1 (ORC ubiquitin ligase 1)  HGNC  Alliance
Mus musculus (house mouse) : Rnf219 (ring finger protein 219)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Obi1 (ORC ubiquitin ligase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : OBI1 (ORC ubiquitin ligase 1)
Canis lupus familiaris (dog) : OBI1 (ORC ubiquitin ligase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Obi1 (ORC ubiquitin ligase 1)
Sus scrofa (pig) : OBI1 (ORC ubiquitin ligase 1)
Chlorocebus sabaeus (African green monkey) : OBI1 (ORC ubiquitin ligase 1)
Heterocephalus glaber (naked mole-rat) : Obi1 (ORC ubiquitin ligase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01588,632,089 - 88,670,325 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1588,631,794 - 88,670,349 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01592,127,751 - 92,165,948 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41588,548,933 - 88,588,816 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1580,396,575 - 80,435,845 (-)NCBICelera
Cytogenetic Map15q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Obi1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564706
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.