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Gene: Thumpd3 (THUMP domain containing 3) Rattus norvegicus
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Symbol: Thumpd3
Name: THUMP domain containing 3
Description: Predicted to have tRNA (guanine) methyltransferase activity. Predicted to be involved in tRNA methylation. Predicted to localize to the cytosol and nucleolus. Orthologous to human THUMPD3 (THUMP domain containing 3); INTERACTS WITH bisphenol A; flutamide; ketamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC500288; RGD1560852; similar to THUMP domain containing 3; THUMP domain-containing protein 3
Orthologs:
Homo sapiens (human) : THUMPD3 (THUMP domain containing 3)  HGNC  Alliance
Mus musculus (house mouse) : Thumpd3 (THUMP domain containing 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Thumpd3 (THUMP domain containing 3)
Pan paniscus (bonobo/pygmy chimpanzee) : THUMPD3 (THUMP domain containing 3)
Canis lupus familiaris (dog) : THUMPD3 (THUMP domain containing 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Thumpd3 (THUMP domain containing 3)
Sus scrofa (pig) : THUMPD3 (THUMP domain containing 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04144,985,850 - 145,010,164 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04208,284,202 - 208,308,521 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44148,918,100 - 148,941,045 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4134,744,697 - 134,767,664 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Thumpd3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560852
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.