Ckap2-ps1 (cytoskeleton-associated protein 2, pseudogene 1) - Rat Genome Database

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Gene: Ckap2-ps1 (cytoskeleton-associated protein 2, pseudogene 1) Rattus norvegicus
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Symbol: Ckap2-ps1
Name: cytoskeleton-associated protein 2, pseudogene 1
RGD ID: 1559912
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC500016; RGD1559912; similar to cytoskeleton associated protein 2
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8433,925,627 - 33,927,639 (+)NCBIGRCr8
mRatBN7.2432,958,992 - 32,961,061 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0429,912,957 - 29,914,969 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0429,820,178 - 29,822,190 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4429,590,178 - 29,592,190 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera428,486,023 - 28,488,035 (+)NCBICelera
Cytogenetic Map4q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Ckap2-ps1
6 total Variants

1 to 10 of 32 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829457114705Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41467806559678065Rat
8552906Pigfal3Plasma insulin-like growth factor 1 level QTL 3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)41008408955084089Rat
1357341Gluco5Glucose level QTL 56.4adipocyte free fatty acid secretion trait (VT:0010465)absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446)4133250345Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1357343Gluco4Glucose level QTL 40.00002adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)4133250345Rat
6478766Anxrr47Anxiety related response QTL 470.09637locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)41008408955084089Rat
70222Eae2Experimental allergic encephalomyelitis QTL 24.3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)42133334339505420Rat
631642Stl2Serum triglyceride level QTL 23.3blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521917856647776Rat
6478769Anxrr48Anxiety related response QTL 480.02514locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)41008408955084089Rat

1 to 10 of 32 rows





GenBank Nucleotide JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-45714 BioCyc
NCBI Gene 500016 ENTREZGENE
PhenoGen Ckap2-ps1 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Ckap2-ps1  cytoskeleton-associated protein 2, pseudogene 1  RGD1559912  similar to cytoskeleton associated protein 2  Symbol and Name Changed 1299863 APPROVED
2008-04-30 RGD1559912  similar to cytoskeleton associated protein 2   RGD1559912_predicted  similar to cytoskeleton associated protein 2 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1559912_predicted  similar to cytoskeleton associated protein 2 (predicted)  LOC500016  similar to cytoskeleton associated protein 2  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC500016  similar to cytoskeleton associated protein 2      Symbol and Name status set to provisional 70820 PROVISIONAL