Flnc (filamin C, gamma) - Rat Genome Database

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Gene: Flnc (filamin C, gamma) Mus musculus
Analyze
Symbol: Flnc
Name: filamin C, gamma
RGD ID: 1558082
MGI Page MGI
Description: Predicted to enable ankyrin binding activity and identical protein binding activity. Involved in muscle cell development. Predicted to be located in several cellular components, including intercellular bridge; sarcolemma; and sarcoplasm. Is expressed in several structures, including diaphragm; embryo mesenchyme; heart; skeletal musculature; and spinal cord ventricular layer. Used to study myofibrillar myopathy 5. Human ortholog(s) of this gene implicated in distal myopathy 4; hypertrophic cardiomyopathy 26; and myofibrillar myopathy 5. Orthologous to human FLNC (filamin C).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110055E19Rik; ABP-280; ABP-280-like protein; ABP-L; ABPL; actin binding protein 280; actin-binding protein 280; actin-binding-like protein; filamin, gamma; filamin-2; filamin-C; Fl; FLN-C; Fln2; gamma-filamin
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39629,433,150 - 29,461,888 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl629,433,255 - 29,461,882 (+)EnsemblGRCm39 Ensembl
GRCm38629,433,153 - 29,461,889 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl629,433,256 - 29,461,883 (+)EnsemblGRCm38mm10GRCm38
MGSCv37629,383,153 - 29,411,888 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36629,383,163 - 29,411,899 (+)NCBIMGSCv36mm8
Celera629,440,371 - 29,469,772 (+)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
7,12-dimethyltetraphene  (ISO)
actinomycin D  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (EXP,ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
cantharidin  (EXP)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
choline  (EXP)
ciglitazone  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (ISO)
cyclophosphamide  (ISO)
cytarabine  (ISO)
dexamethasone  (ISO)
Didecyldimethylammonium  (ISO)
dimethyl sulfoxide  (ISO)
dimethylarsinic acid  (EXP)
dimethylselenide  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (ISO)
ethylparaben  (ISO)
etoposide  (ISO)
fenamidone  (EXP)
fenvalerate  (ISO)
folic acid  (EXP)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (ISO)
hydrogen peroxide  (EXP)
hydroxyl  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
lidocaine  (ISO)
lipopolysaccharide  (ISO)
mercury dibromide  (ISO)
methamphetamine  (EXP)
methylarsonic acid  (EXP)
methylseleninic acid  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
nickel sulfate  (ISO)
ozone  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
phenylmercury acetate  (ISO)
pioglitazone  (EXP)
potassium chromate  (ISO)
potassium dichromate  (EXP)
raloxifene  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium fluoride  (EXP)
Soman  (ISO)
sotorasib  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trametinib  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Integrin inactivators: balancing cellular functions in vitro and in vivo. Bouvard D, etal., Nat Rev Mol Cell Biol. 2013 Jul;14(7):430-42. doi: 10.1038/nrm3599. Epub 2013 May 30.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Large-scale screen for genes controlling mammalian embryogenesis, using high-throughput gene expression analysis in mouse embryos. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8088838   PMID:10349636   PMID:10679933   PMID:11042159   PMID:11076861   PMID:11807098   PMID:12477932   PMID:12692149   PMID:15306695   PMID:15385448   PMID:15489334   PMID:15910244  
PMID:16141072   PMID:16141073   PMID:16602821   PMID:16914736   PMID:17145501   PMID:17360453   PMID:17360532   PMID:17898075   PMID:19015242   PMID:19075228   PMID:19506036   PMID:19843512  
PMID:20206623   PMID:21267068   PMID:21565611   PMID:24598388   PMID:24703692   PMID:24963132   PMID:25987543   PMID:26472074   PMID:26555887   PMID:26584622   PMID:26929074   PMID:27171814  
PMID:27206985   PMID:28378742   PMID:28827800   PMID:29078393   PMID:29374072   PMID:30333137   PMID:30550785   PMID:31162944   PMID:32150467   PMID:32325033   PMID:32887649   PMID:33202721  
PMID:33742095   PMID:35055055   PMID:36114006   PMID:36595063   PMID:36706168   PMID:37492967  


Genomics

Comparative Map Data
Flnc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39629,433,150 - 29,461,888 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl629,433,255 - 29,461,882 (+)EnsemblGRCm39 Ensembl
GRCm38629,433,153 - 29,461,889 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl629,433,256 - 29,461,883 (+)EnsemblGRCm38mm10GRCm38
MGSCv37629,383,153 - 29,411,888 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36629,383,163 - 29,411,899 (+)NCBIMGSCv36mm8
Celera629,440,371 - 29,469,772 (+)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.36NCBI
FLNC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387128,830,406 - 128,859,272 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7128,830,406 - 128,859,274 (+)EnsemblGRCh38hg38GRCh38
GRCh377128,470,460 - 128,499,326 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367128,257,719 - 128,286,572 (+)NCBINCBI36Build 36hg18NCBI36
Build 347128,064,593 - 128,093,276NCBI
Celera7123,266,997 - 123,295,842 (+)NCBICelera
Cytogenetic Map7q32.1NCBI
HuRef7122,832,064 - 122,860,967 (+)NCBIHuRef
CHM1_17128,403,744 - 128,432,589 (+)NCBICHM1_1
T2T-CHM13v2.07130,143,333 - 130,172,198 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27127,854,228 - 127,883,073 (+)NCBI
Flnc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8458,999,445 - 59,027,240 (+)NCBIGRCr8
mRatBN7.2458,034,088 - 58,061,882 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl458,034,189 - 58,061,844 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx463,017,203 - 63,044,933 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0458,933,350 - 58,961,083 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0457,335,244 - 57,362,974 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0456,710,934 - 56,738,779 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl456,711,049 - 56,738,791 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0456,478,171 - 56,505,940 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4456,313,707 - 56,341,400 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1456,572,156 - 56,598,993 (+)NCBI
Celera453,142,130 - 53,169,823 (+)NCBICelera
Cytogenetic Map4q22NCBI
Flnc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554799,633,598 - 9,661,777 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554799,633,817 - 9,661,725 (+)NCBIChiLan1.0ChiLan1.0
FLNC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26165,634,918 - 165,663,848 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1717,645,161 - 17,674,094 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07120,782,584 - 120,811,504 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17133,307,041 - 133,335,896 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7133,307,041 - 133,335,896 (+)Ensemblpanpan1.1panPan2
FLNC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1147,792,708 - 7,819,723 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl147,793,449 - 7,819,940 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha147,479,565 - 7,506,435 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0147,558,590 - 7,585,437 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl147,558,591 - 7,585,635 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1147,763,614 - 7,790,446 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0147,505,626 - 7,532,496 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0147,651,043 - 7,677,902 (-)NCBIUU_Cfam_GSD_1.0
Flnc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511854,632,610 - 54,660,604 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647915,756,370 - 15,784,359 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647915,756,370 - 15,784,365 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FLNC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1819,759,740 - 19,787,618 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11819,759,734 - 19,787,616 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21820,855,080 - 20,882,950 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FLNC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12197,431,666 - 97,460,178 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2197,431,648 - 97,461,135 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660425,941,273 - 5,970,541 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Flnc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247837,334,312 - 7,361,134 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247837,334,421 - 7,360,795 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Flnc
635 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:911
Count of miRNA genes:277
Interacting mature miRNAs:321
Transcripts:ENSMUST00000065090, ENSMUST00000090474, ENSMUST00000101617, ENSMUST00000148404
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301131Chol2_mcholesterol 2 (mouse)Not determined6132144495Mouse
5491191Mobq2_mmultigenic obesity QTL 2 (mouse)Not determined6132144495Mouse
1302024Skull7_mskull morphology 7 (mouse)Not determined6132144495Mouse
15039372Nmrs22_mNAFLD-associated magnetic resonance shift 22 (mouse)6147633435476334Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
1300731Smdq3_msegregation of mitochondrial DNA QTL 3 (mouse)Not determined6424920638249325Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
11353836Bmiq1_mbody mass index QTL 1 (mouse)6450382329751333Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345291115Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348703611Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348703611Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348703611Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080576983Mouse
1302051Sluc7_msusceptibility to lung cancer 7 (mouse)Not determined6929707443297168Mouse
10043869Cia6a_mcollagen induced arthritis QTL 6a (mouse)Not determined61211797146118069Mouse
4141749Obrq2_mobesity resistance QTL 2 (mouse)Not determined1275122146751333Mouse
1301998Bts2_mbladder tumor susceptibility 2 (mouse)Not determined61275122146751333Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61769999953476985Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61771159851711719Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61771159851711719Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1771159851711719Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414773364675Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61961634653616346Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61961634653616346Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61961634653616346Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268571299759Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62004983054049830Mouse
14700690Ccs6_mcolon cancer susceptibility 6 (mouse)62377693457776934Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62499999979976983Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2829099362291115Mouse

Markers in Region
Flnc  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38629,461,216 - 29,461,693UniSTSGRCm38
MGSCv37629,411,216 - 29,411,693UniSTSGRCm37
Celera629,469,101 - 29,469,577UniSTS
Cytogenetic Map6A3.3UniSTS
cM Map68.5UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000065090   ⟹   ENSMUSP00000064163
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl629,433,275 - 29,461,882 (+)Ensembl
GRCm38.p6 Ensembl629,433,276 - 29,461,883 (+)Ensembl
RefSeq Acc Id: ENSMUST00000101617   ⟹   ENSMUSP00000099139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl629,433,275 - 29,461,882 (+)Ensembl
GRCm38.p6 Ensembl629,433,276 - 29,461,883 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148404
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl629,433,255 - 29,439,055 (+)Ensembl
GRCm38.p6 Ensembl629,433,256 - 29,439,056 (+)Ensembl
RefSeq Acc Id: NM_001081185   ⟹   NP_001074654
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39629,433,152 - 29,461,888 (+)NCBI
GRCm38629,433,153 - 29,461,889 (+)NCBI
MGSCv37629,383,153 - 29,411,888 (+)RGD
Celera629,440,371 - 29,469,772 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001311074   ⟹   NP_001298003
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39629,433,255 - 29,461,888 (+)NCBI
GRCm38629,433,256 - 29,461,889 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036152282   ⟹   XP_036008175
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39629,433,150 - 29,461,882 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036152283   ⟹   XP_036008176
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39629,433,150 - 29,461,882 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001074654   ⟸   NM_001081185
- Peptide Label: isoform 1
- UniProtKB: Q6PAI6 (UniProtKB/Swiss-Prot),   B9EKT2 (UniProtKB/Swiss-Prot),   B2RY80 (UniProtKB/Swiss-Prot),   Q9JJ38 (UniProtKB/Swiss-Prot),   Q8VHX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001298003   ⟸   NM_001311074
- Peptide Label: isoform 2
- UniProtKB: Q8VHX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000064163   ⟸   ENSMUST00000065090
RefSeq Acc Id: ENSMUSP00000099139   ⟸   ENSMUST00000101617
RefSeq Acc Id: XP_036008175   ⟸   XM_036152282
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036008176   ⟸   XM_036152283
- Peptide Label: isoform X2
Protein Domains
Calponin-homology (CH)

Promoters
RGD ID:6839304
Promoter ID:MM_KWN:45373
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   ES_Cell,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000065090,   ENSMUST00000090472,   ENSMUST00000101617,   NM_001081185,   UC009BDM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36629,383,259 - 29,383,759 (+)MPROMDB
RGD ID:6839306
Promoter ID:MM_KWN:45374
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:UC009BDO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36629,396,191 - 29,396,691 (+)MPROMDB
RGD ID:6889182
Promoter ID:EPDNEW_M8042
Type:multiple initiation site
Name:Flnc_2
Description:Mus musculus filamin C, gamma , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8043  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38629,433,153 - 29,433,213EPDNEW
RGD ID:6889184
Promoter ID:EPDNEW_M8043
Type:multiple initiation site
Name:Flnc_1
Description:Mus musculus filamin C, gamma , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8042  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38629,433,258 - 29,433,318EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95557 AgrOrtholog
Ensembl Genes ENSMUSG00000068699 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000065090 ENTREZGENE
  ENSMUST00000065090.8 UniProtKB/Swiss-Prot
  ENSMUST00000101617 ENTREZGENE
  ENSMUST00000101617.9 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.418.10 UniProtKB/Swiss-Prot
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Actinin_actin-bd_CS UniProtKB/Swiss-Prot
  CH-domain UniProtKB/Swiss-Prot
  CH_dom_sf UniProtKB/Swiss-Prot
  Filamin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Filamin/ABP280_repeat-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Filamin/ABP280_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_E-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:68794 UniProtKB/Swiss-Prot
MGD MGI:95557 ENTREZGENE
NCBI Gene 68794 ENTREZGENE
PANTHER FILAMIN-C UniProtKB/TrEMBL
  JITTERBUG, ISOFORM N UniProtKB/Swiss-Prot
  PTHR38537 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Filamin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00307 UniProtKB/Swiss-Prot
PhenoGen Flnc PhenoGen
PROSITE ACTININ_1 UniProtKB/Swiss-Prot
  ACTININ_2 UniProtKB/Swiss-Prot
  FILAMIN_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50021 UniProtKB/Swiss-Prot
SMART IG_FLMN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00033 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47576 UniProtKB/Swiss-Prot
  SSF81296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2RY80 ENTREZGENE
  B9EKT2 ENTREZGENE
  FLNC_MOUSE UniProtKB/Swiss-Prot
  Q3UXJ8_MOUSE UniProtKB/TrEMBL
  Q6PAI6 ENTREZGENE
  Q8VHX6 ENTREZGENE
  Q9JJ38 ENTREZGENE
UniProt Secondary B2RY80 UniProtKB/Swiss-Prot
  B9EKT2 UniProtKB/Swiss-Prot
  Q6PAI6 UniProtKB/Swiss-Prot
  Q9JJ38 UniProtKB/Swiss-Prot