Angpt1 (angiopoietin 1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Angpt1 (angiopoietin 1) Mus musculus
Analyze
Symbol: Angpt1
Name: angiopoietin 1
RGD ID: 1551549
MGI Page MGI
Description: Enables signaling receptor binding activity. Acts upstream of or within several processes, including blood vessel development; regulation of protein phosphorylation; and regulation of signal transduction. Predicted to be located in membrane raft; microvillus; and plasma membrane. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including brain; cardiovascular system; liver; metanephros; and respiratory system. Human ortholog(s) of this gene implicated in alcohol dependence; brain ischemia; diabetic retinopathy; hereditary angioedema; and hypertension. Orthologous to human ANGPT1 (angiopoietin 1).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 1110046O21Rik; an; Ang; Ang-1; Ang1; angiopoietin-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391542,288,063 - 42,540,373 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1542,288,119 - 42,540,373 (-)EnsemblGRCm39 Ensembl
GRCm381542,424,667 - 42,676,977 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1542,424,723 - 42,676,977 (-)EnsemblGRCm38mm10GRCm38
MGSCv371542,256,269 - 42,508,341 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361542,254,797 - 42,506,869 (-)NCBIMGSCv36mm8
Celera1542,923,801 - 43,172,633 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1516.69NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane  (EXP,ISO)
1,1-dichloroethene  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
arachidonyl-2'-chloroethylamide  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenous acid  (ISO)
atrazine  (ISO)
baicalin  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
cadmium dichloride  (ISO)
cannabidiol  (ISO)
capsaicin  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chloroprene  (ISO)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
crocidolite asbestos  (EXP)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
daunorubicin  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
ferric oxide  (ISO)
furan  (ISO)
geldanamycin  (ISO)
genistein  (EXP,ISO)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
iloprost  (ISO)
indometacin  (ISO)
inulin  (EXP)
L-serine  (ISO)
Lasiocarpine  (ISO)
lipopolysaccharide  (ISO)
LY294002  (ISO)
mercury dichloride  (ISO)
metformin  (ISO)
methotrexate  (ISO)
methoxychlor  (ISO)
methylmercury chloride  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-acetyl-L-cysteine  (ISO)
N-nitrosodiethylamine  (ISO)
naringin  (ISO)
nicotinic acid  (EXP,ISO)
ochratoxin A  (ISO)
oxybenzone  (EXP)
ozone  (EXP)
paclitaxel  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
PD123319  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
permethrin  (ISO)
phenylephrine  (EXP)
phenylmercury acetate  (ISO)
poly(vinyl chloride)  (ISO)
progesterone  (ISO)
propanal  (ISO)
quercetin  (ISO)
rofecoxib  (ISO)
rotenone  (ISO)
roxarsone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
sildenafil citrate  (ISO)
silicon dioxide  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
simvastatin  (ISO)
sodium arsenite  (ISO)
streptozocin  (ISO)
temozolomide  (ISO)
testosterone  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP,ISO)
thimerosal  (ISO)
thiram  (ISO)
torcetrapib  (ISO)
trichostatin A  (ISO)
tyrphostin AG 1478  (ISO)
valproic acid  (ISO)
valsartan  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activation of transmembrane receptor protein tyrosine kinase activity  (ISO)
angiogenesis  (IBA,IDA,IMP)
animal organ regeneration  (ISO)
blood coagulation  (IEA)
branching involved in blood vessel morphogenesis  (TAS)
cardiac muscle tissue morphogenesis  (TAS)
cell surface receptor protein tyrosine kinase signaling pathway  (IDA)
cell-substrate adhesion  (IDA)
endocardium morphogenesis  (TAS)
endoderm development  (TAS)
glomerulus vasculature development  (IDA,ISO)
hemopoiesis  (IDA)
heparin biosynthetic process  (IEA,ISO)
in utero embryonic development  (IGI,IMP)
liver regeneration  (ISO)
negative regulation of apoptotic process  (ISO)
negative regulation of cell adhesion  (IEA,ISO)
negative regulation of cytokine production involved in immune response  (IDA)
negative regulation of endothelial cell apoptotic process  (IEA,ISO)
negative regulation of neuron apoptotic process  (IDA,IGI)
negative regulation of protein import into nucleus  (IDA)
negative regulation of protein phosphorylation  (IDA)
negative regulation of vascular permeability  (IDA,ISO)
neuron apoptotic process  (IDA,IGI)
ovarian follicle development  (ISO)
positive chemotaxis  (IEA,ISO)
positive regulation of blood vessel endothelial cell migration  (IEA,ISO)
positive regulation of blood-brain barrier permeability  (IEA,ISO)
positive regulation of cell adhesion  (IDA)
positive regulation of coagulation  (IEA)
positive regulation of endothelial cell migration  (ISO,TAS)
positive regulation of ERK1 and ERK2 cascade  (IEA,ISO)
positive regulation of gene expression  (IEA,ISO)
positive regulation of peptidyl-serine phosphorylation  (IDA)
positive regulation of peptidyl-tyrosine phosphorylation  (IDA,ISO)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IDA,ISO)
positive regulation of protein phosphorylation  (ISO)
positive regulation of protein ubiquitination  (IEA,ISO)
positive regulation of receptor internalization  (IEA,ISO)
positive regulation of vascular endothelial growth factor receptor signaling pathway  (TAS)
protein localization to cell surface  (IEA,ISO)
regulation of canonical NF-kappaB signal transduction  (IGI)
regulation of endothelial cell proliferation  (ISO)
regulation of macrophage migration inhibitory factor signaling pathway  (IDA)
regulation of skeletal muscle satellite cell proliferation  (IEA,ISO)
regulation of tumor necrosis factor production  (IDA)
response to estrogen  (ISO)
response to hypoxia  (ISO)
response to vitamin B3  (ISO)
sprouting angiogenesis  (IEA,ISO)
Tie signaling pathway  (IBA,ISO,TAS)
vasculogenesis  (TAS)
vasculogenesis involved in coronary vascular morphogenesis  (TAS)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. High-grade clear cell renal cell carcinoma has a higher angiogenic activity than low-grade renal cell carcinoma based on histomorphological quantification and qRT-PCR mRNA expression profile. Baldewijns MM, etal., Br J Cancer. 2007 Jun 18;96(12):1888-95. Epub 2007 May 15.
2. An association study revealed substantial effects of dominance, epistasis and substance dependence co-morbidity on alcohol dependence symptom count. Chen G, etal., Addict Biol. 2017 Nov;22(6):1475-1485. doi: 10.1111/adb.12402. Epub 2016 May 5.
3. Angiopoietin-1 inhibits intrinsic apoptotic signaling and vascular hyperpermeability following hemorrhagic shock. Childs EW, etal., Am J Physiol Heart Circ Physiol. 2008 May;294(5):H2285-95. Epub 2008 Mar 14.
4. A new animal model for pulmonary hypertension based on the overexpression of a single gene, angiopoietin-1. Chu D, etal., Ann Thorac Surg. 2004 Feb;77(2):449-56; discussion 456-7.
5. Angiopoietin-2 causes pericyte dropout in the normal retina: evidence for involvement in diabetic retinopathy. Hammes HP, etal., Diabetes. 2004 Apr;53(4):1104-10.
6. Expression of angiopoietin-1, angiopoietin-2, and Tie2 genes in normal ovary with corpus luteum and in ovarian cancer. Hata K, etal., Oncology. 2002;62(4):340-8.
7. A pericyte-derived angiopoietin-1 multimeric complex induces occludin gene expression in brain capillary endothelial cells through Tie-2 activation in vitro. Hori S, etal., J Neurochem 2004 Apr;89(2):503-13.
8. Suppression of diabetic retinopathy with angiopoietin-1. Joussen AM, etal., Am J Pathol. 2002 May;160(5):1683-93.
9. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
10. AAC-11 overexpression induces invasion and protects cervical cancer cells from apoptosis. Kim JW, etal., Lab Invest. 2000 Apr;80(4):587-94.
11. Angiopoietin-1 promotes neurite outgrowth from dorsal root ganglion cells positive for Tie-2 receptor. Kosacka J, etal., Cell Tissue Res. 2005 Apr;320(1):11-9. Epub 2005 Feb 16.
12. Angiopoietin-1 prevents hypertension and target organ damage through its interaction with endothelial Tie2 receptor. Lee JS, etal., Cardiovasc Res. 2008 Jun 1;78(3):572-80. Epub 2008 Feb 19.
13. Changes in angiopoietin expression in glomeruli involved in glomerulosclerosis in rats with daunorubicin-induced nephrosis. Lu YH, etal., Acta Pharmacol Sin. 2006 May;27(5):579-87.
14. MGDs mouse GO annotations MGD data from the GO Consortium
15. Effects of aspirin on intra-platelet vascular endothelial growth factor, angiopoietin-1, and p-selectin levels in hypertensive patients. Nadar S, etal., Am J Hypertens. 2006 Sep;19(9):970-7; discussion 978.
16. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
17. Therapeutic benefits by human mesenchymal stem cells (hMSCs) and Ang-1 gene-modified hMSCs after cerebral ischemia. Onda T, etal., J Cereb Blood Flow Metab. 2007 Jul 18;.
18. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
19. Alteration of the vascular endothelial growth factor and angiopoietins-1 and -2 pathways in transitional cell carcinomas of the urinary bladder associated with tumor progression. Quentin T, etal., Anticancer Res. 2004 Sep-Oct;24(5A):2745-56.
20. The role of angiopoietins during angiogenesis in gliomas. Reiss Y, etal., Brain Pathol. 2005 Oct;15(4):311-7.
21. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
22. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
23. Angiogenic factors in normal endometrium and endometrial adenocarcinoma. Saito M, etal., Pathol Int. 2007 Mar;57(3):140-7.
24. Reciprocal regulation of angiopoietin-1 and angiopoietin-2 following myocardial infarction in the rat. Sandhu R, etal., Cardiovasc Res. 2004 Oct 1;64(1):115-24.
25. Protective role of COMP-Ang1 in ischemic rat brain. Shin HY, etal., J Neurosci Res. 2009 Nov 2.
26. Antiangiogenic treatment with Sunitinib ameliorates inflammatory infiltrate, fibrosis, and portal pressure in cirrhotic rats. Tugues S, etal., Hepatology. 2007 Dec;46(6):1919-26.
27. Postischemic angiogenic factor expression in stroke-prone rats. Wang MM, etal., Exp Neurol 2002 Feb;173(2):283-8.
28. Expression of Tie-2 and angiopoietin-1 and -2 in early phase of ulcer healing. Wen CY, etal., J Gastroenterol. 2003;38(5):431-5.
29. The expression of angiopoietins and their receptor Tie-2 in human prostate carcinoma. Wurmbach JH, etal., Anticancer Res. 2000 Nov-Dec;20(6D):5217-20.
30. Downregulation of angiopoietin-1 and Tie2 in chronic hypoxic pulmonary hypertension. Yamamoto A, etal., Respiration. 2008;75(3):328-38. Epub 2007 Dec 10.
31. Expression of angiogenic factors is upregulated in DMBA-induced rat mammary pathologies. Yan M, etal., Pathobiology. 2004;71(5):253-60.
32. [The expression and significance of the angiopoietin-1 in the kidney of diabetic rats] Yang YB, etal., Sichuan Da Xue Xue Bao Yi Xue Ban. 2007 Jan;38(1):93-6, 104.
33. Angiopoietin1/Tie2 and VEGF/Flk1 induced by MSC treatment amplifies angiogenesis and vascular stabilization after stroke. Zacharek A, etal., J Cereb Blood Flow Metab. 2007 Mar 14;.
Additional References at PubMed
PMID:8980223   PMID:8980224   PMID:9204896   PMID:9367982   PMID:9683559   PMID:9778514   PMID:9846489   PMID:10051567   PMID:10215630   PMID:10323857   PMID:10335479   PMID:10349636  
PMID:10359181   PMID:10395786   PMID:10446940   PMID:10617467   PMID:10675351   PMID:10700190   PMID:10943840   PMID:11032855   PMID:11042159   PMID:11076861   PMID:11084652   PMID:11172728  
PMID:11439183   PMID:11500985   PMID:11507774   PMID:11953986   PMID:12048246   PMID:12060561   PMID:12093914   PMID:12150788   PMID:12221099   PMID:12361603   PMID:12368264   PMID:12427764  
PMID:12450124   PMID:12469114   PMID:12477932   PMID:12588999   PMID:12766907   PMID:12858538   PMID:12858549   PMID:12960064   PMID:14623307   PMID:14627725   PMID:14745002   PMID:14980515  
PMID:14991706   PMID:15016731   PMID:15073150   PMID:15107403   PMID:15184386   PMID:15226265   PMID:15260986   PMID:15368895   PMID:15501241   PMID:15520864   PMID:15531367   PMID:15579434  
PMID:15637314   PMID:15648096   PMID:15690488   PMID:15705793   PMID:15746084   PMID:15843414   PMID:15882861   PMID:15889140   PMID:15958513   PMID:16107612   PMID:16141072   PMID:16141073  
PMID:16234353   PMID:16302230   PMID:16396910   PMID:16470614   PMID:16514057   PMID:16645151   PMID:16679392   PMID:16778080   PMID:16778190   PMID:16824955   PMID:16836957   PMID:16887829  
PMID:17030988   PMID:17065333   PMID:17187775   PMID:17273793   PMID:17488888   PMID:17562701   PMID:17573777   PMID:17596403   PMID:17705680   PMID:17825261   PMID:17965409   PMID:18006519  
PMID:18061570   PMID:18199826   PMID:18206867   PMID:18252863   PMID:18310225   PMID:18408125   PMID:18502941   PMID:18505784   PMID:18508041   PMID:18556567   PMID:18617694   PMID:18691637  
PMID:18804439   PMID:18823985   PMID:19015235   PMID:19018775   PMID:19217887   PMID:19409199   PMID:19619540   PMID:19710174   PMID:19733541   PMID:19815705   PMID:19881219   PMID:20060382  
PMID:20123094   PMID:20133818   PMID:20185832   PMID:20299672   PMID:20332116   PMID:20346184   PMID:20357108   PMID:20406889   PMID:20463289   PMID:20619341   PMID:20737509   PMID:20937270  
PMID:20978081   PMID:21113176   PMID:21179479   PMID:21200018   PMID:21267068   PMID:21270129   PMID:21355089   PMID:21421844   PMID:21515377   PMID:21550017   PMID:21593423   PMID:21606590  
PMID:21677750   PMID:21693521   PMID:21772310   PMID:21809376   PMID:21852201   PMID:21873635   PMID:22143796   PMID:22357955   PMID:22363445   PMID:22558265   PMID:22723298   PMID:22848540  
PMID:22917924   PMID:22925884   PMID:23041942   PMID:23063659   PMID:23149415   PMID:23171542   PMID:23274064   PMID:23349620   PMID:23424209   PMID:23504320   PMID:23523683   PMID:23676498  
PMID:24009238   PMID:24016759   PMID:24019535   PMID:24048525   PMID:24129405   PMID:24407281   PMID:24586553   PMID:24603727   PMID:24609620   PMID:24807580   PMID:24917145   PMID:24952961  
PMID:24960457   PMID:25043619   PMID:25053429   PMID:25072663   PMID:25091710   PMID:25180700   PMID:25202984   PMID:25264302   PMID:25516967   PMID:25572963   PMID:25608750   PMID:25742797  
PMID:25821987   PMID:26120030   PMID:26276819   PMID:26465321   PMID:26744331   PMID:27454431   PMID:27683553   PMID:27894114   PMID:27960088   PMID:28179430   PMID:28376568   PMID:28438786  
PMID:28508859   PMID:28684544   PMID:28800750   PMID:28835631   PMID:28920924   PMID:28924218   PMID:29079808   PMID:29106382   PMID:29237738   PMID:29293543   PMID:29323190   PMID:29358379  
PMID:29377123   PMID:29559443   PMID:29774773   PMID:29791855   PMID:29934496   PMID:30295643   PMID:30728183   PMID:30760202   PMID:30788433   PMID:30796970   PMID:31581897   PMID:31678621  
PMID:31685802   PMID:32061671   PMID:32251422   PMID:32369573   PMID:32784053   PMID:33020664   PMID:33164880   PMID:33227706   PMID:33619517   PMID:34321999   PMID:34407407   PMID:34502440  
PMID:34663817   PMID:34963058   PMID:35014213   PMID:35194044   PMID:35779860   PMID:36172864   PMID:36190459   PMID:37948457   PMID:38110169  


Genomics

Comparative Map Data
Angpt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391542,288,063 - 42,540,373 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1542,288,119 - 42,540,373 (-)EnsemblGRCm39 Ensembl
GRCm381542,424,667 - 42,676,977 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1542,424,723 - 42,676,977 (-)EnsemblGRCm38mm10GRCm38
MGSCv371542,256,269 - 42,508,341 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361542,254,797 - 42,506,869 (-)NCBIMGSCv36mm8
Celera1542,923,801 - 43,172,633 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1516.69NCBI
ANGPT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388107,249,482 - 107,497,918 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8107,249,482 - 107,498,055 (-)EnsemblGRCh38hg38GRCh38
GRCh378108,261,710 - 108,510,146 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368108,330,886 - 108,579,430 (-)NCBINCBI36Build 36hg18NCBI36
Build 348108,330,885 - 108,579,430NCBI
Celera8104,448,513 - 104,696,524 (-)NCBICelera
Cytogenetic Map8q23.1NCBI
HuRef8103,581,813 - 103,830,178 (-)NCBIHuRef
CHM1_18108,301,960 - 108,550,507 (-)NCBICHM1_1
T2T-CHM13v2.08108,377,097 - 108,625,564 (-)NCBIT2T-CHM13v2.0
Angpt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8775,415,959 - 75,668,696 (-)NCBIGRCr8
mRatBN7.2773,528,345 - 73,783,953 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl773,531,486 - 73,784,067 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx775,390,636 - 75,634,234 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0777,593,123 - 77,836,716 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0777,461,245 - 77,704,839 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0781,338,327 - 81,592,459 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl781,342,280 - 81,592,206 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0781,364,881 - 81,618,559 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4778,195,504 - 78,451,471 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera770,543,119 - 70,792,915 (-)NCBICelera
Cytogenetic Map7q31NCBI
Angpt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541730,198,842 - 30,386,266 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541730,199,508 - 30,386,695 (-)NCBIChiLan1.0ChiLan1.0
ANGPT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27124,617,718 - 124,863,319 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18100,139,400 - 100,383,799 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08103,893,234 - 104,137,661 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18106,039,873 - 106,287,245 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8106,042,041 - 106,286,783 (-)Ensemblpanpan1.1panPan2
ANGPT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1138,068,920 - 8,312,090 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl138,048,205 - 8,311,618 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha138,012,976 - 8,253,361 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0138,330,622 - 8,573,873 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl138,330,895 - 8,573,753 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1138,089,554 - 8,329,930 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0138,207,290 - 8,447,896 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0138,284,694 - 8,525,154 (-)NCBIUU_Cfam_GSD_1.0
Angpt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530329,679,371 - 29,900,106 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647037,105,466 - 37,328,190 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647037,105,469 - 37,328,183 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANGPT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl429,933,135 - 30,233,960 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1429,925,203 - 30,233,434 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2432,833,909 - 32,855,132 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.2432,433,135 - 32,433,409 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.2432,646,874 - 32,751,649 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANGPT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18102,020,346 - 102,268,443 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603938,309,531 - 38,560,517 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Angpt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476322,646,231 - 22,718,294 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476322,645,807 - 22,818,592 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Angpt1
8885 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:810
Count of miRNA genes:434
Interacting mature miRNAs:562
Transcripts:ENSMUST00000022921
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
1302165Yv_myellow value (mouse)Not determined151384700647847148Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15692948175871849Mouse
1301406Egrd2_mearly growth rate (mouse)Not determined152631178060311880Mouse
1301020Pheo_mpheomelanin (mouse)Not determined151384700647847148Mouse
10412172Habiir5_mhyperoxic acute lung injury imprinted region 5 (mouse)Not determined15927302243311880Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
13801028Toa2_mtesticular oocyte appearance 2 (mouse)153874784643035791Mouse
27226759Feml17_mfemur length 17, 10 week (mouse)15762948155263396Mouse
27095940Ulnl8_mulna length 8, 10 week (mouse)15722948155263396Mouse
27226755Feml22_mfemur length 22, 16 week (mouse)15762948159271849Mouse
26884412Bzwq10_mbi-zygomatic width QTL 10, 10 week (mouse)15612948171471849Mouse
1301557Bbaa22_mB.burgdorferi-associated arthritis 22 (mouse)Not determined152446257258462805Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154216339695497881Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
1301951Eila3_methanol induced locomotor activity 3 (mouse)Not determined151492758748927756Mouse
27226800Scvln20_msacral vertebrae length 2, 16 week (mouse)152660008666371849Mouse
10412206Bbaa31_mB.burgdorferi-associated arthritis 31 (mouse)Not determined154146257243657524Mouse
26884392Humsd8_mhumerus midshaft diameter 8, 16 week (mouse)152930014676084200Mouse
4141192Ssrq2_mstress response QTL 2 (mouse)Not determined927302256186850Mouse
1300772Bglq16_mbody growth late QTL 16 (mouse)Not determined152631178060311880Mouse
26884387Skwq8_mskull length QTL 8, 10 week (mouse)15612948168271849Mouse
26884384Skwq12_mskull length QTL 12, 16 week (mouse)15612948150763396Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15612948175871849Mouse
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
4142459Lfnq3_mlung function QTL 3 (mouse)Not determined4017702272372580Mouse
1300949Lore5_mloss of righting induced by ethanol 5 (mouse)Not determined154001944158022297Mouse
26884439Sklq11_mskull length QTL 11, 10 week (mouse)15812948447663396Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
4141423Nstr2_mnerve sheath tumor resistance QTL 2 (mouse)Not determined1492758748927756Mouse
12792977Tbmd1_mtibial bone mineral density 1, males only (mouse)153807048952031841Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
26884429Zlq6_mzygomatic length QTL 6, 10 week (mouse)15682948144963396Mouse
1301450Bpq6_mblood pressure QTL 6 (mouse)Not determined152828264662282739Mouse
14928313Manh78_mmandible shape 78 (mouse)152148464155484641Mouse
26884417Bzwq4_mbi-zygomatic width QTL 4, 5 week (mouse)15612948172471849Mouse
12859288Criq1_mCitrobacter rodentium infection QTL 1 (mouse)151603395450033954Mouse
1357512Bsbob5_mBSB obesity 5 (mouse)Not determined152828264662282739Mouse
26884423Zlq10_mzygomatic length QTL 10, 16 week (mouse)152060008650763396Mouse
12859289Criq3_mCitrobacter rodentium infection QTL 3 (mouse)152259376556593765Mouse
4141409Radsvq1_mradiation sensitivity QTL 1 (mouse)Not determined2548497859484978Mouse
1357514Mbis3_mMycobacterium bovis-induced systemic lupus erythematosus 3 (mouse)Not determined162631178060311880Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
1301324Cdif_mcolor difference (mouse)Not determined153597590669976019Mouse
1301580Hrq2_mheart rate quantitative locus 2 (mouse)Not determined153910039573100593Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1302007Bbaa14_mB.burgdorferi-associated arthritis 14 (mouse)Not determined151492758748927756Mouse
1301499Bdln2_mbody length 2 (mouse)Not determined151564534349645470Mouse
4142160Femwf10_mfemur work to failure 10 (mouse)Not determined2289301456893160Mouse
10401902Sicd2_mseizure-induced cell death 2 (mouse)Not determined15347438971197538Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
1300578Cd8ts3_mCD8 T cell subset 3 (mouse)Not determined153400469468004804Mouse
1301345Bgeq14_mbody growth early QTL 14 (mouse)Not determined152631178060311880Mouse
1300967Bdt6_mbone density traits 6 (mouse)Not determined152529580659295928Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800024486684201Mouse
4140994Shali3_msurvival time to hyperoxic acute lung injury 3 (mouse)Not determined927302243311880Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15692948175871849Mouse
26884452Sklq17_mskull length QTL 17, 16 week (mouse)153020014657963396Mouse

Markers in Region
Angpt1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371542,507,955 - 42,508,133UniSTSGRCm37
MGSCv371542,507,882 - 42,507,949UniSTSGRCm37
Celera1543,172,174 - 43,172,241UniSTS
Celera1543,172,247 - 43,172,425UniSTS
Cytogenetic Map15B3.1UniSTS
BE200393  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381542,424,952 - 42,425,063UniSTSGRCm38
MGSCv371542,256,498 - 42,256,609UniSTSGRCm37
Celera1542,924,030 - 42,924,141UniSTS
Cytogenetic Map15B3.1UniSTS
Whitehead/MRC_RH15400.4UniSTS
02.MMHAP64FRA8.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381542,589,615 - 42,589,771UniSTSGRCm38
MGSCv371542,421,161 - 42,421,317UniSTSGRCm37
Celera1543,094,098 - 43,094,254UniSTS
Cytogenetic Map15B3.1UniSTS
Whitehead_YAC15 UniSTS
D15Mit206  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381542,432,410 - 42,432,532UniSTSGRCm38
MGSCv371542,263,956 - 42,264,078UniSTSGRCm37
Celera1542,931,488 - 42,931,614UniSTS
Cytogenetic Map15B3.1UniSTS
cM Map1517.2UniSTS
Whitehead Genetic1517.5UniSTS
Whitehead_YAC15 UniSTS
Agpt  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15B3.1UniSTS
cM Map1514.3UniSTS
PMC316637P2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381542,676,488 - 42,676,757UniSTSGRCm38
MGSCv371542,508,034 - 42,508,303UniSTSGRCm37
Celera1543,172,326 - 43,172,595UniSTS
Cytogenetic Map15B3.1UniSTS
Angpt1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map1H1UniSTS
Agpt  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15B3.1UniSTS
cM Map1514.3UniSTS
Angpt1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15B3.1UniSTS
Angpt1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381542,676,409 - 42,676,587UniSTSGRCm38
MGSCv371542,507,955 - 42,508,133UniSTSGRCm37
Celera1543,172,247 - 43,172,425UniSTS
Cytogenetic Map15B3.1UniSTS
Angpt1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381542,676,336 - 42,676,403UniSTSGRCm38
MGSCv371542,507,882 - 42,507,949UniSTSGRCm37
Celera1543,172,174 - 43,172,241UniSTS
Cytogenetic Map15B3.1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001286062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006520323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036159077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036159078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC100734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC101713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC161347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC067410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U83509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000022921   ⟹   ENSMUSP00000022921
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1542,288,119 - 42,540,373 (-)Ensembl
GRCm38.p6 Ensembl1542,424,723 - 42,676,977 (-)Ensembl
Ensembl Acc Id: ENSMUST00000227738
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1542,496,702 - 42,540,145 (-)Ensembl
GRCm38.p6 Ensembl1542,633,306 - 42,676,749 (-)Ensembl
RefSeq Acc Id: NM_001286062   ⟹   NP_001272991
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391542,288,063 - 42,540,373 (-)NCBI
GRCm381542,424,667 - 42,676,977 (-)NCBI
Celera1542,923,745 - 43,172,815 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009640   ⟹   NP_033770
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391542,288,063 - 42,540,373 (-)NCBI
GRCm381542,424,667 - 42,676,977 (-)NCBI
MGSCv371542,256,269 - 42,508,341 (-)RGD
Celera1542,923,745 - 43,172,815 (-)NCBI
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006520323   ⟹   XP_006520386
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391542,288,119 - 42,539,621 (-)NCBI
GRCm381542,424,667 - 42,530,715 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036159077   ⟹   XP_036014970
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391542,288,119 - 42,539,532 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036159078   ⟹   XP_036014971
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391542,288,119 - 42,539,532 (-)NCBI
Sequence:
RefSeq Acc Id: NP_033770   ⟸   NM_009640
- Peptide Label: isoform 1 precursor
- UniProtKB: Q6NWV7 (UniProtKB/Swiss-Prot),   O08538 (UniProtKB/Swiss-Prot),   Q8C2K6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272991   ⟸   NM_001286062
- Peptide Label: isoform 2 precursor
- UniProtKB: Q8C2K6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006520386   ⟸   XM_006520323
- Peptide Label: isoform X1
- UniProtKB: Q8C2K6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000022921   ⟸   ENSMUST00000022921
RefSeq Acc Id: XP_036014971   ⟸   XM_036159078
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036014970   ⟸   XM_036159077
- Peptide Label: isoform X2
Protein Domains
Fibrinogen C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O08538-F1-model_v2 AlphaFold O08538 1-498 view protein structure

Promoters
RGD ID:6825763
Promoter ID:MM_KWN:18363
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day4,   MEF_B6
Transcripts:ENSMUST00000022921,   UC007VPD.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361542,508,131 - 42,508,631 (-)MPROMDB
RGD ID:8683676
Promoter ID:EPDNEW_M19868
Type:initiation region
Name:Angpt1_1
Description:Mus musculus angiopoietin 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381542,676,821 - 42,676,881EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:108448 AgrOrtholog
Ensembl Genes ENSMUSG00000022309 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000022921 ENTREZGENE
  ENSMUST00000022921.7 UniProtKB/Swiss-Prot
Gene3D-CATH 3.90.215.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Gamma-fibrinogen Carboxyl Terminal Fragment, domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Fibrinogen-like_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibrinogen_C-term_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibrinogen_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11600 UniProtKB/Swiss-Prot
MGD MGI:108448 ENTREZGENE
NCBI Gene 11600 ENTREZGENE
PANTHER FIBRINOGEN/TENASCIN/ANGIOPOEITIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR19143:SF156 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Fibrinogen_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Angpt1 PhenoGen
PROSITE FIBRINOGEN_C_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FIBRINOGEN_C_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FBG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56496 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ANGP1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q6A0F0_MOUSE UniProtKB/TrEMBL
  Q6NWV7 ENTREZGENE
  Q8C2K6 ENTREZGENE, UniProtKB/TrEMBL
  Q9CST2_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q6NWV7 UniProtKB/Swiss-Prot